Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SNORA63.2-201ENST00000362603 126 ntBASIC2.83□□□□□ -1.96
USB1Q9BQ65 RNU6-686P-201ENST00000364839 107 ntBASIC2.83□□□□□ -1.96
USB1Q9BQ65 RNU6-571P-201ENST00000384128 107 ntBASIC2.83□□□□□ -1.96
USB1Q9BQ65 SNORA7.4-201ENST00000384249 137 ntBASIC2.83□□□□□ -1.96
USB1Q9BQ65 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.83□□□□□ -1.96
USB1Q9BQ65 HMGN2P35-201ENST00000412164 270 ntBASIC2.83□□□□□ -1.96
USB1Q9BQ65 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.83□□□□□ -1.96
USB1Q9BQ65 MIR4325-201ENST00000583049 90 ntBASIC2.83□□□□□ -1.96
USB1Q9BQ65 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.83□□□□□ -1.96
USB1Q9BQ65 U6.109-201ENST00000636749 87 ntBASIC2.83□□□□□ -1.96
USB1Q9BQ65 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
USB1Q9BQ65 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
USB1Q9BQ65 SNORD56.5-201ENST00000364281 72 ntBASIC2.82□□□□□ -1.96
USB1Q9BQ65 MIR588-201ENST00000384900 83 ntBASIC2.82□□□□□ -1.96
USB1Q9BQ65 RNA5SP270-201ENST00000411361 118 ntBASIC2.82□□□□□ -1.96
USB1Q9BQ65 RN7SL863P-201ENST00000462370 296 ntBASIC2.82□□□□□ -1.96
USB1Q9BQ65 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
USB1Q9BQ65 RNA5SP48-201ENST00000363969 126 ntBASIC2.81□□□□□ -1.96
USB1Q9BQ65 RNU6-590P-201ENST00000365039 107 ntBASIC2.81□□□□□ -1.96
USB1Q9BQ65 SNORA72.6-201ENST00000384520 129 ntBASIC2.81□□□□□ -1.96
USB1Q9BQ65 SNORD15B-201ENST00000384714 146 ntBASIC2.81□□□□□ -1.96
USB1Q9BQ65 AC004965.1-201ENST00000413033 213 ntBASIC2.81□□□□□ -1.96
USB1Q9BQ65 BX276092.1-201ENST00000427368 251 ntBASIC2.81□□□□□ -1.96
USB1Q9BQ65 AC023790.1-201ENST00000482174 347 ntBASIC2.81□□□□□ -1.96
USB1Q9BQ65 SCARNA20.6-201ENST00000517251 106 ntBASIC2.81□□□□□ -1.96
USB1Q9BQ65 AC107016.2-201ENST00000547968 190 ntBASIC2.81□□□□□ -1.96
USB1Q9BQ65 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.81□□□□□ -1.96
USB1Q9BQ65 PRELID3BP2-201ENST00000605362 201 ntBASIC2.81□□□□□ -1.96
USB1Q9BQ65 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
USB1Q9BQ65 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
USB1Q9BQ65 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USB1Q9BQ65 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USB1Q9BQ65 Y_RNA.119-201ENST00000363301 96 ntBASIC2.8□□□□□ -1.96
USB1Q9BQ65 AC003982.1-202ENST00000469928 248 ntBASIC2.8□□□□□ -1.96
USB1Q9BQ65 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USB1Q9BQ65 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
USB1Q9BQ65 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USB1Q9BQ65 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
USB1Q9BQ65 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
USB1Q9BQ65 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.79□□□□□ -1.96
USB1Q9BQ65 RNU6-811P-201ENST00000384069 107 ntBASIC2.79□□□□□ -1.96
USB1Q9BQ65 RNA5SP229-201ENST00000410809 99 ntBASIC2.79□□□□□ -1.96
USB1Q9BQ65 SCARNA18B-201ENST00000458806 135 ntBASIC2.79□□□□□ -1.96
USB1Q9BQ65 RNU1-143P-201ENST00000516296 146 ntBASIC2.79□□□□□ -1.96
USB1Q9BQ65 SNORD111.1-201ENST00000516421 86 ntBASIC2.79□□□□□ -1.96
USB1Q9BQ65 MIR2682-201ENST00000580305 110 ntBASIC2.79□□□□□ -1.96
USB1Q9BQ65 MIR4536-1-201ENST00000583537 88 ntBASIC2.79□□□□□ -1.96
USB1Q9BQ65 U1.23-201ENST00000610293 146 ntBASIC2.79□□□□□ -1.96
USB1Q9BQ65 RNU1-68P-201ENST00000615382 146 ntBASIC2.79□□□□□ -1.96
USB1Q9BQ65 U1.39-201ENST00000621562 146 ntBASIC2.79□□□□□ -1.96
USB1Q9BQ65 AL365361.1-201ENST00000566942 3481 ntBASIC2.79□□□□□ -1.96
USB1Q9BQ65 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
USB1Q9BQ65 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.79□□□□□ -1.96
USB1Q9BQ65 MIR422A-201ENST00000362286 90 ntBASIC2.78□□□□□ -1.96
USB1Q9BQ65 RNU6-161P-201ENST00000363051 106 ntBASIC2.78□□□□□ -1.96
USB1Q9BQ65 SNORA25.9-201ENST00000365087 128 ntBASIC2.78□□□□□ -1.96
USB1Q9BQ65 MIR194-1-201ENST00000384892 85 ntBASIC2.78□□□□□ -1.96
USB1Q9BQ65 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
USB1Q9BQ65 S100A11P2-201ENST00000467589 312 ntBASIC2.78□□□□□ -1.96
USB1Q9BQ65 MIR3134-201ENST00000579433 74 ntBASIC2.78□□□□□ -1.96
USB1Q9BQ65 SNORA4-201ENST00000584302 138 ntBASIC2.78□□□□□ -1.96
USB1Q9BQ65 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
USB1Q9BQ65 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
USB1Q9BQ65 VTRNA1-1-201ENST00000363120 99 ntBASIC2.77□□□□□ -1.97
USB1Q9BQ65 MIR563-201ENST00000385080 79 ntBASIC2.77□□□□□ -1.97
USB1Q9BQ65 Y_RNA.660-201ENST00000516002 120 ntBASIC2.77□□□□□ -1.97
USB1Q9BQ65 RNU6-1108P-201ENST00000516308 104 ntBASIC2.77□□□□□ -1.97
USB1Q9BQ65 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.77□□□□□ -1.97
USB1Q9BQ65 MIR3200-201ENST00000580767 85 ntBASIC2.77□□□□□ -1.97
USB1Q9BQ65 AL096861.1-201ENST00000610899 123 ntBASIC2.77□□□□□ -1.97
USB1Q9BQ65 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.77□□□□□ -1.97
USB1Q9BQ65 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.77□□□□□ -1.97
USB1Q9BQ65 AL035425.3-201ENST00000564206 4996 ntBASIC2.77□□□□□ -1.97
USB1Q9BQ65 RNU6-851P-201ENST00000384565 107 ntBASIC2.76□□□□□ -1.97
USB1Q9BQ65 RNA5SP292-201ENST00000390974 118 ntBASIC2.76□□□□□ -1.97
USB1Q9BQ65 RNA5SP450-201ENST00000411206 102 ntBASIC2.76□□□□□ -1.97
USB1Q9BQ65 AC005908.1-201ENST00000468701 347 ntBASIC2.76□□□□□ -1.97
USB1Q9BQ65 FGF7P7-201ENST00000514120 227 ntBASIC2.76□□□□□ -1.97
USB1Q9BQ65 AL162274.2-201ENST00000614406 332 ntBASIC2.76□□□□□ -1.97
USB1Q9BQ65 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.76□□□□□ -1.97
USB1Q9BQ65 AC131280.1-202ENST00000624067 4211 ntBASIC2.76□□□□□ -1.97
USB1Q9BQ65 RNA5SP374-201ENST00000362939 125 ntBASIC2.75□□□□□ -1.97
USB1Q9BQ65 RNA5SP259-201ENST00000365541 109 ntBASIC2.75□□□□□ -1.97
USB1Q9BQ65 RNU6-411P-201ENST00000384451 107 ntBASIC2.75□□□□□ -1.97
USB1Q9BQ65 SNORA40.18-201ENST00000391200 128 ntBASIC2.75□□□□□ -1.97
USB1Q9BQ65 AL139132.1-201ENST00000431587 344 ntBASIC2.75□□□□□ -1.97
USB1Q9BQ65 SNORA18.5-201ENST00000516616 101 ntBASIC2.75□□□□□ -1.97
USB1Q9BQ65 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
USB1Q9BQ65 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
USB1Q9BQ65 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
USB1Q9BQ65 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.75□□□□□ -1.97
USB1Q9BQ65 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.74□□□□□ -1.97
USB1Q9BQ65 SNORD36A-201ENST00000362874 73 ntBASIC2.74□□□□□ -1.97
USB1Q9BQ65 SNORA71.1-201ENST00000364523 117 ntBASIC2.74□□□□□ -1.97
USB1Q9BQ65 RNU6-396P-201ENST00000365369 105 ntBASIC2.74□□□□□ -1.97
USB1Q9BQ65 HSPE1P24-201ENST00000450782 238 ntBASIC2.74□□□□□ -1.97
USB1Q9BQ65 AP000942.3-201ENST00000603702 160 ntBASIC2.74□□□□□ -1.97
USB1Q9BQ65 AC067747.1-201ENST00000608026 250 ntBASIC2.74□□□□□ -1.97
USB1Q9BQ65 MIR6740-201ENST00000618268 113 ntBASIC2.74□□□□□ -1.97
USB1Q9BQ65 AC008163.1-202ENST00000636004 2889 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 384.9 ms