Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RNA5SP144-201ENST00000410846 116 ntBASIC1.85□□□□□ -2.11
SIMC1Q8NDZ2 ZNF355P-201ENST00000427301 3216 ntBASIC1.85□□□□□ -2.11
SIMC1Q8NDZ2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 MIR302B-201ENST00000362188 73 ntBASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 RNU6-439P-201ENST00000384188 106 ntBASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 MIR583-201ENST00000384846 75 ntBASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 MIR590-201ENST00000385008 97 ntBASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 SNORA19.1-201ENST00000410656 129 ntBASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 AL512326.2-201ENST00000426359 151 ntBASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 AC093850.1-201ENST00000454121 251 ntBASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 RNU2-11P-201ENST00000459191 187 ntBASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 RNU6-109P-201ENST00000516364 107 ntBASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 RNU6-184P-201ENST00000516514 107 ntBASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 RNU7-6P-201ENST00000516845 62 ntBASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 AC021613.1-201ENST00000623880 111 ntBASIC1.84□□□□□ -2.11
SIMC1Q8NDZ2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
SIMC1Q8NDZ2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
SIMC1Q8NDZ2 MIR424-201ENST00000362227 98 ntBASIC1.83□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-1123P-201ENST00000362347 106 ntBASIC1.83□□□□□ -2.12
SIMC1Q8NDZ2 RNU1-17P-201ENST00000363022 152 ntBASIC1.83□□□□□ -2.12
SIMC1Q8NDZ2 Y_RNA.118-201ENST00000363300 101 ntBASIC1.83□□□□□ -2.12
SIMC1Q8NDZ2 Y_RNA.544-201ENST00000384650 113 ntBASIC1.83□□□□□ -2.12
SIMC1Q8NDZ2 RNU7-45P-201ENST00000459460 63 ntBASIC1.83□□□□□ -2.12
SIMC1Q8NDZ2 SNORA40.13-201ENST00000516379 120 ntBASIC1.83□□□□□ -2.12
SIMC1Q8NDZ2 AC004812.1-201ENST00000540773 146 ntBASIC1.83□□□□□ -2.12
SIMC1Q8NDZ2 MIR4422-201ENST00000581938 83 ntBASIC1.83□□□□□ -2.12
SIMC1Q8NDZ2 AC021506.2-201ENST00000612354 169 ntBASIC1.83□□□□□ -2.12
SIMC1Q8NDZ2 AL162726.3-218ENST00000636401 95 ntBASIC1.83□□□□□ -2.12
SIMC1Q8NDZ2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SIMC1Q8NDZ2 Y_RNA.508-201ENST00000384502 114 ntBASIC1.82□□□□□ -2.12
SIMC1Q8NDZ2 MIR452-201ENST00000385020 85 ntBASIC1.82□□□□□ -2.12
SIMC1Q8NDZ2 MIR136-201ENST00000385207 82 ntBASIC1.82□□□□□ -2.12
SIMC1Q8NDZ2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
SIMC1Q8NDZ2 AL022718.1-201ENST00000412004 84 ntBASIC1.82□□□□□ -2.12
SIMC1Q8NDZ2 POLR2J4-204ENST00000418424 324 ntBASIC1.82□□□□□ -2.12
SIMC1Q8NDZ2 AC003989.2-201ENST00000440224 169 ntBASIC1.82□□□□□ -2.12
SIMC1Q8NDZ2 PGBD4P5-201ENST00000445958 426 ntBASIC1.82□□□□□ -2.12
SIMC1Q8NDZ2 AC107297.1-201ENST00000459991 176 ntBASIC1.82□□□□□ -2.12
SIMC1Q8NDZ2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.82□□□□□ -2.12
SIMC1Q8NDZ2 snoU13.31-201ENST00000607291 104 ntBASIC1.82□□□□□ -2.12
SIMC1Q8NDZ2 AC087741.2-201ENST00000619415 172 ntBASIC1.82□□□□□ -2.12
SIMC1Q8NDZ2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.82□□□□□ -2.12
SIMC1Q8NDZ2 Y_RNA.78-201ENST00000362970 110 ntBASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 SNORA1.2-201ENST00000365189 134 ntBASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 Y_RNA.370-201ENST00000365589 108 ntBASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 Y_RNA.531-201ENST00000384589 121 ntBASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-816P-201ENST00000390914 107 ntBASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-1268P-201ENST00000391214 107 ntBASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-1239P-201ENST00000391310 107 ntBASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 HSPE1P24-201ENST00000450782 238 ntBASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 RPS23P4-201ENST00000487908 423 ntBASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 AC099513.1-201ENST00000490423 301 ntBASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 AC141557.1-201ENST00000540982 400 ntBASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 MIR6845-201ENST00000613182 61 ntBASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 AC095038.3-201ENST00000634439 195 ntBASIC1.81□□□□□ -2.12
SIMC1Q8NDZ2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-1131P-201ENST00000364955 107 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-49P-201ENST00000384256 107 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 MIR526A1-201ENST00000384897 85 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-1319P-201ENST00000390855 104 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-747P-201ENST00000390928 104 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-241P-201ENST00000391148 104 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-177P-201ENST00000411257 104 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 RPL31P63-201ENST00000422565 375 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 RPL39P25-201ENST00000449384 154 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 RNU2-13P-201ENST00000515909 113 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-904P-201ENST00000516206 101 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-1258P-201ENST00000516911 111 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 Y_RNA.818-201ENST00000618813 71 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 AL513423.1-201ENST00000621695 132 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.8□□□□□ -2.12
SIMC1Q8NDZ2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 Y_RNA.171-201ENST00000363760 102 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-294P-201ENST00000364999 102 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 MIR488-201ENST00000365739 83 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 MIR660-201ENST00000385235 97 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 SNORD28B-201ENST00000390993 75 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 MIR1912-201ENST00000410389 80 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 RNU7-67P-201ENST00000459003 62 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 RNA5SP182-201ENST00000516064 82 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-958P-201ENST00000516995 106 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 MIR548AR-201ENST00000582191 57 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 AL513534.2-201ENST00000603836 250 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 Y_RNA.773-201ENST00000607168 90 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 MIR8063-201ENST00000621930 81 ntBASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SIMC1Q8NDZ2 AC004965.1-201ENST00000413033 213 ntBASIC1.78□□□□□ -2.12
SIMC1Q8NDZ2 RPS29P29-201ENST00000456396 171 ntBASIC1.78□□□□□ -2.12
SIMC1Q8NDZ2 SNORD123-201ENST00000459473 70 ntBASIC1.78□□□□□ -2.12
SIMC1Q8NDZ2 AC113410.1-201ENST00000505029 247 ntBASIC1.78□□□□□ -2.12
SIMC1Q8NDZ2 RNU6-970P-201ENST00000516312 107 ntBASIC1.78□□□□□ -2.12
SIMC1Q8NDZ2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.78□□□□□ -2.12
SIMC1Q8NDZ2 SNORA77B-201ENST00000578179 125 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 204.2 ms