Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 MIR3646-201ENST00000578301 84 ntBASIC1.08□□□□□ -2.24
RAPH1Q70E73 MIR5688-201ENST00000580619 83 ntBASIC1.08□□□□□ -2.24
RAPH1Q70E73 AC131055.1-201ENST00000584626 316 ntBASIC1.08□□□□□ -2.24
RAPH1Q70E73 MIR4762-201ENST00000585261 75 ntBASIC1.08□□□□□ -2.24
RAPH1Q70E73 U7.2-201ENST00000607576 63 ntBASIC1.08□□□□□ -2.24
RAPH1Q70E73 AL596211.1-201ENST00000569873 2277 ntBASIC1.08□□□□□ -2.24
RAPH1Q70E73 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RAPH1Q70E73 RNA5SP205-201ENST00000364653 136 ntBASIC1.07□□□□□ -2.24
RAPH1Q70E73 snoU2-30.1-201ENST00000365012 70 ntBASIC1.07□□□□□ -2.24
RAPH1Q70E73 RNU6-1138P-201ENST00000365359 106 ntBASIC1.07□□□□□ -2.24
RAPH1Q70E73 Y_RNA.366-201ENST00000365540 102 ntBASIC1.07□□□□□ -2.24
RAPH1Q70E73 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
RAPH1Q70E73 RNA5SP127-201ENST00000411051 133 ntBASIC1.07□□□□□ -2.24
RAPH1Q70E73 RPL39P39-201ENST00000455840 151 ntBASIC1.07□□□□□ -2.24
RAPH1Q70E73 SNORD79.1-201ENST00000516069 84 ntBASIC1.07□□□□□ -2.24
RAPH1Q70E73 RNA5SP153-201ENST00000516498 76 ntBASIC1.07□□□□□ -2.24
RAPH1Q70E73 Y_RNA.692-201ENST00000516627 105 ntBASIC1.07□□□□□ -2.24
RAPH1Q70E73 SNORA18.7-201ENST00000516910 131 ntBASIC1.07□□□□□ -2.24
RAPH1Q70E73 MIR3121-201ENST00000579680 77 ntBASIC1.07□□□□□ -2.24
RAPH1Q70E73 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.07□□□□□ -2.24
RAPH1Q70E73 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
RAPH1Q70E73 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
RAPH1Q70E73 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
RAPH1Q70E73 SNORA25.9-201ENST00000365087 128 ntBASIC1.06□□□□□ -2.24
RAPH1Q70E73 Y_RNA.353-201ENST00000365440 108 ntBASIC1.06□□□□□ -2.24
RAPH1Q70E73 Y_RNA.363-201ENST00000365529 113 ntBASIC1.06□□□□□ -2.24
RAPH1Q70E73 MIR539-201ENST00000365690 78 ntBASIC1.06□□□□□ -2.24
RAPH1Q70E73 RNU6-442P-201ENST00000383968 104 ntBASIC1.06□□□□□ -2.24
RAPH1Q70E73 MIR891A-201ENST00000401237 79 ntBASIC1.06□□□□□ -2.24
RAPH1Q70E73 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.06□□□□□ -2.24
RAPH1Q70E73 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.06□□□□□ -2.24
RAPH1Q70E73 AC002429.1-201ENST00000437672 148 ntBASIC1.06□□□□□ -2.24
RAPH1Q70E73 MIR6078-201ENST00000611069 100 ntBASIC1.06□□□□□ -2.24
RAPH1Q70E73 Y_RNA.37-201ENST00000362606 108 ntBASIC1.05□□□□□ -2.24
RAPH1Q70E73 Y_RNA.81-201ENST00000362997 102 ntBASIC1.05□□□□□ -2.24
RAPH1Q70E73 SNORD115-28-201ENST00000363931 81 ntBASIC1.05□□□□□ -2.24
RAPH1Q70E73 Y_RNA.241-201ENST00000364470 117 ntBASIC1.05□□□□□ -2.24
RAPH1Q70E73 RNU6-53P-201ENST00000365367 106 ntBASIC1.05□□□□□ -2.24
RAPH1Q70E73 MIR499A-201ENST00000384903 122 ntBASIC1.05□□□□□ -2.24
RAPH1Q70E73 SNORD28B-201ENST00000390993 75 ntBASIC1.05□□□□□ -2.24
RAPH1Q70E73 RNU6-938P-201ENST00000411285 103 ntBASIC1.05□□□□□ -2.24
RAPH1Q70E73 AL035461.1-201ENST00000421490 332 ntBASIC1.05□□□□□ -2.24
RAPH1Q70E73 AL158147.1-201ENST00000443970 75 ntBASIC1.05□□□□□ -2.24
RAPH1Q70E73 AC022523.2-201ENST00000561045 150 ntBASIC1.05□□□□□ -2.24
RAPH1Q70E73 Y_RNA.757-201ENST00000578934 114 ntBASIC1.05□□□□□ -2.24
RAPH1Q70E73 AL020996.3-201ENST00000606617 222 ntBASIC1.05□□□□□ -2.24
RAPH1Q70E73 AP001340.1-201ENST00000624405 217 ntBASIC1.05□□□□□ -2.24
RAPH1Q70E73 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
RAPH1Q70E73 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
RAPH1Q70E73 RNU6-888P-201ENST00000363010 101 ntBASIC1.04□□□□□ -2.24
RAPH1Q70E73 SNORD58C-201ENST00000365223 64 ntBASIC1.04□□□□□ -2.24
RAPH1Q70E73 Y_RNA.351-201ENST00000365436 96 ntBASIC1.04□□□□□ -2.24
RAPH1Q70E73 MIR526A1-201ENST00000384897 85 ntBASIC1.04□□□□□ -2.24
RAPH1Q70E73 SNRPGP14-201ENST00000435400 219 ntBASIC1.04□□□□□ -2.24
RAPH1Q70E73 SNORD124-201ENST00000459577 104 ntBASIC1.04□□□□□ -2.24
RAPH1Q70E73 RN7SKP19-201ENST00000516016 252 ntBASIC1.04□□□□□ -2.24
RAPH1Q70E73 AP003484.1-201ENST00000530974 250 ntBASIC1.04□□□□□ -2.24
RAPH1Q70E73 MIR4662B-201ENST00000579498 81 ntBASIC1.04□□□□□ -2.24
RAPH1Q70E73 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
RAPH1Q70E73 AC097639.2-201ENST00000603159 172 ntBASIC1.04□□□□□ -2.24
RAPH1Q70E73 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
RAPH1Q70E73 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
RAPH1Q70E73 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.04□□□□□ -2.24
RAPH1Q70E73 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
RAPH1Q70E73 Y_RNA.35-201ENST00000362601 101 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 Y_RNA.120-201ENST00000363304 110 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 SNORD114-24-201ENST00000365029 72 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 RNU6-215P-201ENST00000365169 102 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 RNU6-690P-201ENST00000365242 106 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 RNU6-1189P-201ENST00000383958 107 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 SNORA80D-201ENST00000384488 135 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 Y_RNA.528-201ENST00000384575 108 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 MIR452-201ENST00000385020 85 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 MIR624-201ENST00000385217 97 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 MT-TI-201ENST00000387365 69 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 SNORA26-201ENST00000391286 122 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 MIR1276-201ENST00000408707 83 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 RNU6-1064P-201ENST00000410626 104 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 RNU6-1190P-201ENST00000410811 104 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 POLR2J4-204ENST00000418424 324 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.03□□□□□ -2.24
RAPH1Q70E73 SCARNA15-202ENST00000516881 127 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 Y_RNA.714-201ENST00000517065 90 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 FAM106DP-201ENST00000586416 501 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 AL365205.2-201ENST00000594586 68 ntBASIC1.03□□□□□ -2.24
RAPH1Q70E73 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.03□□□□□ -2.25
RAPH1Q70E73 RNU6-1187P-201ENST00000364771 110 ntBASIC1.02□□□□□ -2.25
RAPH1Q70E73 Y_RNA.549-201ENST00000384657 102 ntBASIC1.02□□□□□ -2.25
RAPH1Q70E73 RNU6-1104P-201ENST00000384723 104 ntBASIC1.02□□□□□ -2.25
RAPH1Q70E73 RNU6-476P-201ENST00000384726 107 ntBASIC1.02□□□□□ -2.25
RAPH1Q70E73 MIR548A3-201ENST00000385297 97 ntBASIC1.02□□□□□ -2.25
RAPH1Q70E73 MTATP6P29-201ENST00000415057 132 ntBASIC1.02□□□□□ -2.25
RAPH1Q70E73 HMGN1P33-201ENST00000432945 451 ntBASIC1.02□□□□□ -2.25
RAPH1Q70E73 MTND5P18-201ENST00000445624 1801 ntBASIC1.02□□□□□ -2.25
RAPH1Q70E73 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
RAPH1Q70E73 RNA5SP236-201ENST00000516169 116 ntBASIC1.02□□□□□ -2.25
RAPH1Q70E73 RNU7-70P-201ENST00000516941 66 ntBASIC1.02□□□□□ -2.25
RAPH1Q70E73 RNU6-958P-201ENST00000516995 106 ntBASIC1.02□□□□□ -2.25
RAPH1Q70E73 AC025166.1-201ENST00000612411 163 ntBASIC1.02□□□□□ -2.25
RAPH1Q70E73 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms