Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RNA5SP437-201ENST00000517249 129 ntBASIC2.63□□□□□ -1.99
COL13A1Q5TAT6 AL020996.3-201ENST00000606617 222 ntBASIC2.63□□□□□ -1.99
COL13A1Q5TAT6 MIR6733-201ENST00000635723 61 ntBASIC2.63□□□□□ -1.99
COL13A1Q5TAT6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL13A1Q5TAT6 RNU6-170P-201ENST00000362832 104 ntBASIC2.62□□□□□ -1.99
COL13A1Q5TAT6 Y_RNA.68-201ENST00000362881 102 ntBASIC2.62□□□□□ -1.99
COL13A1Q5TAT6 RNU6-296P-201ENST00000384608 107 ntBASIC2.62□□□□□ -1.99
COL13A1Q5TAT6 SUMO1P4-201ENST00000429430 302 ntBASIC2.62□□□□□ -1.99
COL13A1Q5TAT6 AC093850.1-201ENST00000454121 251 ntBASIC2.62□□□□□ -1.99
COL13A1Q5TAT6 MIR4285-201ENST00000581001 85 ntBASIC2.62□□□□□ -1.99
COL13A1Q5TAT6 MIR548AR-201ENST00000582191 57 ntBASIC2.62□□□□□ -1.99
COL13A1Q5TAT6 MIR548AE2-201ENST00000583456 67 ntBASIC2.62□□□□□ -1.99
COL13A1Q5TAT6 SNORD3E-202ENST00000627253 216 ntBASIC2.62□□□□□ -1.99
COL13A1Q5TAT6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
COL13A1Q5TAT6 MIR424-201ENST00000362227 98 ntBASIC2.61□□□□□ -1.99
COL13A1Q5TAT6 RNA5SP393-201ENST00000363423 117 ntBASIC2.61□□□□□ -1.99
COL13A1Q5TAT6 Y_RNA.327-201ENST00000365201 102 ntBASIC2.61□□□□□ -1.99
COL13A1Q5TAT6 MIR605-201ENST00000385078 83 ntBASIC2.61□□□□□ -1.99
COL13A1Q5TAT6 RNA5SP476-201ENST00000516613 103 ntBASIC2.61□□□□□ -1.99
COL13A1Q5TAT6 MIR4791-201ENST00000607666 84 ntBASIC2.61□□□□□ -1.99
COL13A1Q5TAT6 MIR6895-201ENST00000613497 78 ntBASIC2.61□□□□□ -1.99
COL13A1Q5TAT6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL13A1Q5TAT6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL13A1Q5TAT6 Y_RNA.433-201ENST00000384089 102 ntBASIC2.6□□□□□ -1.99
COL13A1Q5TAT6 Y_RNA.470-201ENST00000384307 117 ntBASIC2.6□□□□□ -1.99
COL13A1Q5TAT6 RNU6-616P-201ENST00000384353 107 ntBASIC2.6□□□□□ -1.99
COL13A1Q5TAT6 RNU6-1152P-201ENST00000384576 107 ntBASIC2.6□□□□□ -1.99
COL13A1Q5TAT6 RNU6-679P-201ENST00000391003 106 ntBASIC2.6□□□□□ -1.99
COL13A1Q5TAT6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.6□□□□□ -1.99
COL13A1Q5TAT6 SNORA7.5-201ENST00000410672 110 ntBASIC2.6□□□□□ -1.99
COL13A1Q5TAT6 RNA5SP501-201ENST00000410990 112 ntBASIC2.6□□□□□ -1.99
COL13A1Q5TAT6 snoU13.16-201ENST00000459350 104 ntBASIC2.6□□□□□ -1.99
COL13A1Q5TAT6 RNA5SP57-201ENST00000459463 123 ntBASIC2.6□□□□□ -1.99
COL13A1Q5TAT6 MIR4658-201ENST00000584344 65 ntBASIC2.6□□□□□ -1.99
COL13A1Q5TAT6 AC096720.1-201ENST00000604441 183 ntBASIC2.6□□□□□ -1.99
COL13A1Q5TAT6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.59□□□□□ -1.99
COL13A1Q5TAT6 RNA5SP173-201ENST00000364857 136 ntBASIC2.59□□□□□ -1.99
COL13A1Q5TAT6 Y_RNA.290-201ENST00000364879 114 ntBASIC2.59□□□□□ -1.99
COL13A1Q5TAT6 RNU6-392P-201ENST00000364926 101 ntBASIC2.59□□□□□ -1.99
COL13A1Q5TAT6 SNORD114-22-201ENST00000365423 72 ntBASIC2.59□□□□□ -1.99
COL13A1Q5TAT6 SNORD88.1-201ENST00000408684 91 ntBASIC2.59□□□□□ -1.99
COL13A1Q5TAT6 MRPL35P3-201ENST00000421557 364 ntBASIC2.59□□□□□ -1.99
COL13A1Q5TAT6 AC099513.1-201ENST00000490423 301 ntBASIC2.59□□□□□ -1.99
COL13A1Q5TAT6 RNU7-61P-201ENST00000515897 61 ntBASIC2.59□□□□□ -1.99
COL13A1Q5TAT6 MIR4439-201ENST00000583746 80 ntBASIC2.59□□□□□ -1.99
COL13A1Q5TAT6 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.59□□□□□ -1.99
COL13A1Q5TAT6 AC016717.2-201ENST00000609089 5141 ntBASIC2.59□□□□□ -1.99
COL13A1Q5TAT6 Y_RNA.354-201ENST00000365448 111 ntBASIC2.58□□□□□ -2
COL13A1Q5TAT6 RNU6-1201P-201ENST00000384227 107 ntBASIC2.58□□□□□ -2
COL13A1Q5TAT6 MIR526A1-201ENST00000384897 85 ntBASIC2.58□□□□□ -2
COL13A1Q5TAT6 SNORD28B-201ENST00000390993 75 ntBASIC2.58□□□□□ -2
COL13A1Q5TAT6 AL353813.1-201ENST00000440700 253 ntBASIC2.58□□□□□ -2
COL13A1Q5TAT6 AC012531.4-201ENST00000616509 177 ntBASIC2.58□□□□□ -2
COL13A1Q5TAT6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.58□□□□□ -2
COL13A1Q5TAT6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
COL13A1Q5TAT6 RNU6-1313P-201ENST00000362622 102 ntBASIC2.57□□□□□ -2
COL13A1Q5TAT6 RNA5SP456-201ENST00000364002 114 ntBASIC2.57□□□□□ -2
COL13A1Q5TAT6 RNU6-60P-201ENST00000364792 103 ntBASIC2.57□□□□□ -2
COL13A1Q5TAT6 MIR598-201ENST00000384868 97 ntBASIC2.57□□□□□ -2
COL13A1Q5TAT6 MIR221-201ENST00000385135 110 ntBASIC2.57□□□□□ -2
COL13A1Q5TAT6 RNU6-913P-201ENST00000390913 95 ntBASIC2.57□□□□□ -2
COL13A1Q5TAT6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.57□□□□□ -2
COL13A1Q5TAT6 RNU6-795P-201ENST00000516323 103 ntBASIC2.57□□□□□ -2
COL13A1Q5TAT6 RNU7-43P-201ENST00000516554 64 ntBASIC2.57□□□□□ -2
COL13A1Q5TAT6 RNU6-521P-201ENST00000516663 105 ntBASIC2.57□□□□□ -2
COL13A1Q5TAT6 SNORA74.3-201ENST00000517108 154 ntBASIC2.57□□□□□ -2
COL13A1Q5TAT6 Z82195.2-201ENST00000612348 18351 ntBASIC2.57□□□□□ -2
COL13A1Q5TAT6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
COL13A1Q5TAT6 Y_RNA.95-201ENST00000363079 95 ntBASIC2.56□□□□□ -2
COL13A1Q5TAT6 RNU6-644P-201ENST00000391155 98 ntBASIC2.56□□□□□ -2
COL13A1Q5TAT6 AL451046.2-201ENST00000403074 277 ntBASIC2.56□□□□□ -2
COL13A1Q5TAT6 RPL23AP6-201ENST00000446637 472 ntBASIC2.56□□□□□ -2
COL13A1Q5TAT6 Y_RNA.685-201ENST00000516532 108 ntBASIC2.56□□□□□ -2
COL13A1Q5TAT6 Y_RNA.705-201ENST00000516862 110 ntBASIC2.56□□□□□ -2
COL13A1Q5TAT6 RNA5SP102-201ENST00000516865 106 ntBASIC2.56□□□□□ -2
COL13A1Q5TAT6 U7.3-201ENST00000616123 62 ntBASIC2.56□□□□□ -2
COL13A1Q5TAT6 SNORA1.1-201ENST00000364671 133 ntBASIC2.55□□□□□ -2
COL13A1Q5TAT6 RNU6-360P-201ENST00000390944 104 ntBASIC2.55□□□□□ -2
COL13A1Q5TAT6 RNU6-972P-201ENST00000391208 107 ntBASIC2.55□□□□□ -2
COL13A1Q5TAT6 AC019129.1-201ENST00000403786 261 ntBASIC2.55□□□□□ -2
COL13A1Q5TAT6 HAR1A.1-201ENST00000459583 118 ntBASIC2.55□□□□□ -2
COL13A1Q5TAT6 MIR4303-201ENST00000581299 66 ntBASIC2.55□□□□□ -2
COL13A1Q5TAT6 FAM106DP-201ENST00000586416 501 ntBASIC2.55□□□□□ -2
COL13A1Q5TAT6 AL161431.1-201ENST00000618966 4205 ntBASIC2.55□□□□□ -2
COL13A1Q5TAT6 AL512310.12-203ENST00000640543 90 ntBASIC2.55□□□□□ -2
COL13A1Q5TAT6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL13A1Q5TAT6 Y_RNA.17-201ENST00000362433 111 ntBASIC2.54□□□□□ -2
COL13A1Q5TAT6 Y_RNA.219-201ENST00000364232 113 ntBASIC2.54□□□□□ -2
COL13A1Q5TAT6 SNORA67.1-201ENST00000364749 141 ntBASIC2.54□□□□□ -2
COL13A1Q5TAT6 RNU6-1275P-201ENST00000391087 107 ntBASIC2.54□□□□□ -2
COL13A1Q5TAT6 RNU6-1190P-201ENST00000410811 104 ntBASIC2.54□□□□□ -2
COL13A1Q5TAT6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.54□□□□□ -2
COL13A1Q5TAT6 MIR1270-201ENST00000459320 83 ntBASIC2.54□□□□□ -2
COL13A1Q5TAT6 Y_RNA.659-201ENST00000515994 113 ntBASIC2.54□□□□□ -2
COL13A1Q5TAT6 SNORA31.15-201ENST00000516771 132 ntBASIC2.54□□□□□ -2
COL13A1Q5TAT6 MIR5007-201ENST00000583098 95 ntBASIC2.54□□□□□ -2
COL13A1Q5TAT6 MIR4777-201ENST00000583710 86 ntBASIC2.54□□□□□ -2
COL13A1Q5TAT6 MIR8055-201ENST00000610739 97 ntBASIC2.54□□□□□ -2
COL13A1Q5TAT6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.54□□□□□ -2
COL13A1Q5TAT6 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 321.7 ms