Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 Y_RNA.354-201ENST00000365448 111 ntBASIC1.49□□□□□ -2.17
KHDC1Q4VXA5 RNU6-959P-201ENST00000384671 107 ntBASIC1.49□□□□□ -2.17
KHDC1Q4VXA5 SNORA67.5-201ENST00000391036 107 ntBASIC1.49□□□□□ -2.17
KHDC1Q4VXA5 MIR1185-1-201ENST00000408598 86 ntBASIC1.49□□□□□ -2.17
KHDC1Q4VXA5 AL603825.1-201ENST00000438481 80 ntBASIC1.49□□□□□ -2.17
KHDC1Q4VXA5 AC023790.1-201ENST00000482174 347 ntBASIC1.49□□□□□ -2.17
KHDC1Q4VXA5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.49□□□□□ -2.17
KHDC1Q4VXA5 AL137067.1-201ENST00000615933 120 ntBASIC1.49□□□□□ -2.17
KHDC1Q4VXA5 Y_RNA.140-201ENST00000363474 103 ntBASIC1.48□□□□□ -2.17
KHDC1Q4VXA5 SNORD38B-201ENST00000384690 67 ntBASIC1.48□□□□□ -2.17
KHDC1Q4VXA5 HMGN1P33-201ENST00000432945 451 ntBASIC1.48□□□□□ -2.17
KHDC1Q4VXA5 RN7SKP19-201ENST00000516016 252 ntBASIC1.48□□□□□ -2.17
KHDC1Q4VXA5 SNORA31.2-201ENST00000516019 134 ntBASIC1.48□□□□□ -2.17
KHDC1Q4VXA5 RNA5SP61-201ENST00000516453 100 ntBASIC1.48□□□□□ -2.17
KHDC1Q4VXA5 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
KHDC1Q4VXA5 MIR4305-201ENST00000583252 102 ntBASIC1.48□□□□□ -2.17
KHDC1Q4VXA5 SNORD38B-202ENST00000625943 69 ntBASIC1.48□□□□□ -2.17
KHDC1Q4VXA5 MIR6841-201ENST00000637129 72 ntBASIC1.48□□□□□ -2.17
KHDC1Q4VXA5 RNU4-16P-201ENST00000364737 141 ntBASIC1.47□□□□□ -2.17
KHDC1Q4VXA5 Y_RNA.366-201ENST00000365540 102 ntBASIC1.47□□□□□ -2.17
KHDC1Q4VXA5 RNU6-80P-201ENST00000384195 107 ntBASIC1.47□□□□□ -2.17
KHDC1Q4VXA5 MIR517C-201ENST00000385103 95 ntBASIC1.47□□□□□ -2.17
KHDC1Q4VXA5 SNORA67.6-201ENST00000391093 99 ntBASIC1.47□□□□□ -2.17
KHDC1Q4VXA5 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
KHDC1Q4VXA5 RNA5SP144-201ENST00000410846 116 ntBASIC1.47□□□□□ -2.17
KHDC1Q4VXA5 Y_RNA.617-201ENST00000410920 90 ntBASIC1.47□□□□□ -2.17
KHDC1Q4VXA5 RNU6-602P-201ENST00000411155 105 ntBASIC1.47□□□□□ -2.17
KHDC1Q4VXA5 AL354695.1-201ENST00000427935 228 ntBASIC1.47□□□□□ -2.17
KHDC1Q4VXA5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.47□□□□□ -2.17
KHDC1Q4VXA5 AL161722.3-201ENST00000605789 2983 ntBASIC1.47□□□□□ -2.17
KHDC1Q4VXA5 SNORA22.1-201ENST00000362701 134 ntBASIC1.46□□□□□ -2.18
KHDC1Q4VXA5 POLR2J4-204ENST00000418424 324 ntBASIC1.46□□□□□ -2.18
KHDC1Q4VXA5 AC090844.1-201ENST00000422019 156 ntBASIC1.46□□□□□ -2.18
KHDC1Q4VXA5 MIR2115-201ENST00000516657 100 ntBASIC1.46□□□□□ -2.18
KHDC1Q4VXA5 AC021443.1-201ENST00000604478 211 ntBASIC1.46□□□□□ -2.18
KHDC1Q4VXA5 Y_RNA.71-201ENST00000362892 104 ntBASIC1.45□□□□□ -2.18
KHDC1Q4VXA5 Y_RNA.218-201ENST00000364218 104 ntBASIC1.45□□□□□ -2.18
KHDC1Q4VXA5 SNORD113-1-201ENST00000365321 69 ntBASIC1.45□□□□□ -2.18
KHDC1Q4VXA5 AL022718.1-201ENST00000412004 84 ntBASIC1.45□□□□□ -2.18
KHDC1Q4VXA5 IGKV1-22-201ENST00000524313 326 ntBASIC1.45□□□□□ -2.18
KHDC1Q4VXA5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.45□□□□□ -2.18
KHDC1Q4VXA5 MIR6516-201ENST00000630554 81 ntBASIC1.45□□□□□ -2.18
KHDC1Q4VXA5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
KHDC1Q4VXA5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KHDC1Q4VXA5 RNU6-235P-201ENST00000362644 107 ntBASIC1.44□□□□□ -2.18
KHDC1Q4VXA5 MT-TN-201ENST00000387400 73 ntBASIC1.44□□□□□ -2.18
KHDC1Q4VXA5 AC244023.1-201ENST00000426884 112 ntBASIC1.44□□□□□ -2.18
KHDC1Q4VXA5 RNU7-164P-201ENST00000459221 62 ntBASIC1.44□□□□□ -2.18
KHDC1Q4VXA5 SNORA31.24-201ENST00000517232 57 ntBASIC1.44□□□□□ -2.18
KHDC1Q4VXA5 AC242498.1-201ENST00000604134 111 ntBASIC1.44□□□□□ -2.18
KHDC1Q4VXA5 SEPT14P17-201ENST00000617978 177 ntBASIC1.44□□□□□ -2.18
KHDC1Q4VXA5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
KHDC1Q4VXA5 Y_RNA.363-201ENST00000365529 113 ntBASIC1.43□□□□□ -2.18
KHDC1Q4VXA5 SNORA80D-201ENST00000384488 135 ntBASIC1.43□□□□□ -2.18
KHDC1Q4VXA5 RNU6-613P-201ENST00000410412 108 ntBASIC1.43□□□□□ -2.18
KHDC1Q4VXA5 BTF3P4-201ENST00000418852 495 ntBASIC1.43□□□□□ -2.18
KHDC1Q4VXA5 RNU7-95P-201ENST00000459222 64 ntBASIC1.43□□□□□ -2.18
KHDC1Q4VXA5 RNU6-1234P-201ENST00000516877 103 ntBASIC1.43□□□□□ -2.18
KHDC1Q4VXA5 Y_RNA.298-201ENST00000364960 107 ntBASIC1.42□□□□□ -2.18
KHDC1Q4VXA5 RNU6-1117P-201ENST00000384525 104 ntBASIC1.42□□□□□ -2.18
KHDC1Q4VXA5 RNU6-910P-201ENST00000390844 107 ntBASIC1.42□□□□□ -2.18
KHDC1Q4VXA5 AL591704.2-201ENST00000421658 181 ntBASIC1.42□□□□□ -2.18
KHDC1Q4VXA5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.42□□□□□ -2.18
KHDC1Q4VXA5 RPS29P23-201ENST00000458635 123 ntBASIC1.42□□□□□ -2.18
KHDC1Q4VXA5 RN7SKP179-201ENST00000516126 217 ntBASIC1.42□□□□□ -2.18
KHDC1Q4VXA5 RNU6-970P-201ENST00000516312 107 ntBASIC1.42□□□□□ -2.18
KHDC1Q4VXA5 RNU2-35P-201ENST00000516446 142 ntBASIC1.42□□□□□ -2.18
KHDC1Q4VXA5 SNORA70.22-201ENST00000517160 124 ntBASIC1.42□□□□□ -2.18
KHDC1Q4VXA5 MIR4264-201ENST00000583520 66 ntBASIC1.42□□□□□ -2.18
KHDC1Q4VXA5 AP000753.3-201ENST00000604083 169 ntBASIC1.42□□□□□ -2.18
KHDC1Q4VXA5 SNORD115-2-201ENST00000362842 82 ntBASIC1.41□□□□□ -2.18
KHDC1Q4VXA5 SNORD115-20-201ENST00000365099 82 ntBASIC1.41□□□□□ -2.18
KHDC1Q4VXA5 Y_RNA.338-201ENST00000365320 114 ntBASIC1.41□□□□□ -2.18
KHDC1Q4VXA5 SNORD116-14-201ENST00000383894 92 ntBASIC1.41□□□□□ -2.18
KHDC1Q4VXA5 SNORD116-17-201ENST00000383929 92 ntBASIC1.41□□□□□ -2.18
KHDC1Q4VXA5 SNORD116-15-201ENST00000384445 92 ntBASIC1.41□□□□□ -2.18
KHDC1Q4VXA5 SNORD116-19-201ENST00000384729 92 ntBASIC1.41□□□□□ -2.18
KHDC1Q4VXA5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.41□□□□□ -2.18
KHDC1Q4VXA5 RNA5SP136-201ENST00000410906 107 ntBASIC1.41□□□□□ -2.18
KHDC1Q4VXA5 AP1B1P2-201ENST00000416196 106 ntBASIC1.41□□□□□ -2.18
KHDC1Q4VXA5 SNORD79.1-201ENST00000516069 84 ntBASIC1.41□□□□□ -2.18
KHDC1Q4VXA5 RNU6-1258P-201ENST00000516911 111 ntBASIC1.41□□□□□ -2.18
KHDC1Q4VXA5 AC004812.1-201ENST00000540773 146 ntBASIC1.41□□□□□ -2.18
KHDC1Q4VXA5 AL157777.2-201ENST00000258070 137 ntBASIC1.4□□□□□ -2.19
KHDC1Q4VXA5 Y_RNA.127-201ENST00000363386 109 ntBASIC1.4□□□□□ -2.19
KHDC1Q4VXA5 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
KHDC1Q4VXA5 Y_RNA.531-201ENST00000384589 121 ntBASIC1.4□□□□□ -2.19
KHDC1Q4VXA5 SNORA75.2-201ENST00000391138 150 ntBASIC1.4□□□□□ -2.19
KHDC1Q4VXA5 SNORA75.3-201ENST00000391231 150 ntBASIC1.4□□□□□ -2.19
KHDC1Q4VXA5 AL512326.2-201ENST00000426359 151 ntBASIC1.4□□□□□ -2.19
KHDC1Q4VXA5 RNU7-113P-201ENST00000459273 62 ntBASIC1.4□□□□□ -2.19
KHDC1Q4VXA5 AC113410.1-201ENST00000505029 247 ntBASIC1.4□□□□□ -2.19
KHDC1Q4VXA5 AC108729.3-201ENST00000513484 108 ntBASIC1.4□□□□□ -2.19
KHDC1Q4VXA5 RNU7-123P-201ENST00000515911 60 ntBASIC1.4□□□□□ -2.19
KHDC1Q4VXA5 RNU6-659P-201ENST00000516454 104 ntBASIC1.4□□□□□ -2.19
KHDC1Q4VXA5 RNU6-1061P-201ENST00000516530 99 ntBASIC1.4□□□□□ -2.19
KHDC1Q4VXA5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
KHDC1Q4VXA5 MIR377-201ENST00000362145 69 ntBASIC1.39□□□□□ -2.19
KHDC1Q4VXA5 MIR378A-201ENST00000362177 66 ntBASIC1.39□□□□□ -2.19
KHDC1Q4VXA5 RNA5SP327-201ENST00000362494 101 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms