Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 MIR583-201ENST00000384846 75 ntBASIC1.7□□□□□ -2.14
PTX3P26022 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
PTX3P26022 SNORA40.18-201ENST00000391200 128 ntBASIC1.7□□□□□ -2.14
PTX3P26022 HMGN1P33-201ENST00000432945 451 ntBASIC1.7□□□□□ -2.14
PTX3P26022 Y_RNA.649-201ENST00000459077 103 ntBASIC1.7□□□□□ -2.14
PTX3P26022 RNU7-113P-201ENST00000459273 62 ntBASIC1.7□□□□□ -2.14
PTX3P26022 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.7□□□□□ -2.14
PTX3P26022 AC113410.1-201ENST00000505029 247 ntBASIC1.7□□□□□ -2.14
PTX3P26022 RNU11-2P-201ENST00000516898 142 ntBASIC1.7□□□□□ -2.14
PTX3P26022 SNORD38B-201ENST00000384690 67 ntBASIC1.69□□□□□ -2.14
PTX3P26022 RPS27P16-201ENST00000425758 201 ntBASIC1.69□□□□□ -2.14
PTX3P26022 AC003989.2-201ENST00000440224 169 ntBASIC1.69□□□□□ -2.14
PTX3P26022 AC245047.7-201ENST00000440265 293 ntBASIC1.69□□□□□ -2.14
PTX3P26022 AP003716.2-201ENST00000528260 108 ntBASIC1.69□□□□□ -2.14
PTX3P26022 SNORD38B-202ENST00000625943 69 ntBASIC1.69□□□□□ -2.14
PTX3P26022 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.69□□□□□ -2.14
PTX3P26022 RNY4P6-201ENST00000363667 96 ntBASIC1.68□□□□□ -2.14
PTX3P26022 RNU6-396P-201ENST00000365369 105 ntBASIC1.68□□□□□ -2.14
PTX3P26022 MIR9-3-201ENST00000385084 90 ntBASIC1.68□□□□□ -2.14
PTX3P26022 RNU6-602P-201ENST00000411155 105 ntBASIC1.68□□□□□ -2.14
PTX3P26022 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.68□□□□□ -2.14
PTX3P26022 AL512326.2-201ENST00000426359 151 ntBASIC1.68□□□□□ -2.14
PTX3P26022 RPS23P4-201ENST00000487908 423 ntBASIC1.68□□□□□ -2.14
PTX3P26022 RPS29P11-201ENST00000496507 171 ntBASIC1.68□□□□□ -2.14
PTX3P26022 RNU6-165P-201ENST00000517170 99 ntBASIC1.68□□□□□ -2.14
PTX3P26022 MTND5P34-201ENST00000568888 325 ntBASIC1.68□□□□□ -2.14
PTX3P26022 MIR3163-201ENST00000581592 73 ntBASIC1.68□□□□□ -2.14
PTX3P26022 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.68□□□□□ -2.14
PTX3P26022 RNU6-1054P-201ENST00000411293 104 ntBASIC1.67□□□□□ -2.14
PTX3P26022 MIR8065-201ENST00000620577 100 ntBASIC1.67□□□□□ -2.14
PTX3P26022 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.67□□□□□ -2.14
PTX3P26022 RNA5SP264-201ENST00000363115 107 ntBASIC1.66□□□□□ -2.14
PTX3P26022 Y_RNA.171-201ENST00000363760 102 ntBASIC1.66□□□□□ -2.14
PTX3P26022 RNU6-215P-201ENST00000365169 102 ntBASIC1.66□□□□□ -2.14
PTX3P26022 SNORD116-21-201ENST00000384507 92 ntBASIC1.66□□□□□ -2.14
PTX3P26022 RNU6-1104P-201ENST00000384723 104 ntBASIC1.66□□□□□ -2.14
PTX3P26022 U8.13-201ENST00000390842 128 ntBASIC1.66□□□□□ -2.14
PTX3P26022 MIR1302-7-201ENST00000408841 72 ntBASIC1.66□□□□□ -2.14
PTX3P26022 snoU13.25-201ENST00000458945 104 ntBASIC1.66□□□□□ -2.14
PTX3P26022 MIR2115-201ENST00000516657 100 ntBASIC1.66□□□□□ -2.14
PTX3P26022 RN7SKP88-201ENST00000516847 250 ntBASIC1.66□□□□□ -2.14
PTX3P26022 RNU6-1258P-201ENST00000516911 111 ntBASIC1.66□□□□□ -2.14
PTX3P26022 MIR3945-201ENST00000581853 98 ntBASIC1.66□□□□□ -2.14
PTX3P26022 AP000942.3-201ENST00000603702 160 ntBASIC1.66□□□□□ -2.14
PTX3P26022 PRELID3BP2-201ENST00000605362 201 ntBASIC1.66□□□□□ -2.14
PTX3P26022 7SK.8-201ENST00000612110 250 ntBASIC1.66□□□□□ -2.14
PTX3P26022 7SK.11-201ENST00000615477 250 ntBASIC1.66□□□□□ -2.14
PTX3P26022 7SK.13-201ENST00000622040 250 ntBASIC1.66□□□□□ -2.14
PTX3P26022 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PTX3P26022 RNU6-1325P-201ENST00000364905 105 ntBASIC1.65□□□□□ -2.15
PTX3P26022 SNORD48-201ENST00000364953 64 ntBASIC1.65□□□□□ -2.15
PTX3P26022 RNU6-880P-201ENST00000384526 107 ntBASIC1.65□□□□□ -2.15
PTX3P26022 RNU4-69P-201ENST00000410677 143 ntBASIC1.65□□□□□ -2.15
PTX3P26022 RNA5SP33-201ENST00000516687 98 ntBASIC1.65□□□□□ -2.15
PTX3P26022 MIR4679-2-201ENST00000578358 77 ntBASIC1.65□□□□□ -2.15
PTX3P26022 AC084768.2-201ENST00000622736 221 ntBASIC1.65□□□□□ -2.15
PTX3P26022 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PTX3P26022 SNORA25.3-201ENST00000363205 127 ntBASIC1.64□□□□□ -2.15
PTX3P26022 MT-TN-201ENST00000387400 73 ntBASIC1.64□□□□□ -2.15
PTX3P26022 AC090844.1-201ENST00000422019 156 ntBASIC1.64□□□□□ -2.15
PTX3P26022 RNU6-970P-201ENST00000516312 107 ntBASIC1.64□□□□□ -2.15
PTX3P26022 AC022523.2-201ENST00000561045 150 ntBASIC1.64□□□□□ -2.15
PTX3P26022 MIR103A2-201ENST00000362154 78 ntBASIC1.63□□□□□ -2.15
PTX3P26022 SNORD20-201ENST00000384550 80 ntBASIC1.63□□□□□ -2.15
PTX3P26022 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
PTX3P26022 MIR548A1-201ENST00000385041 97 ntBASIC1.63□□□□□ -2.15
PTX3P26022 MIR1185-1-201ENST00000408598 86 ntBASIC1.63□□□□□ -2.15
PTX3P26022 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.63□□□□□ -2.15
PTX3P26022 snoU13.15-201ENST00000459407 104 ntBASIC1.63□□□□□ -2.15
PTX3P26022 RNU6-919P-201ENST00000516731 104 ntBASIC1.63□□□□□ -2.15
PTX3P26022 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.63□□□□□ -2.15
PTX3P26022 AC007012.1-201ENST00000567192 175 ntBASIC1.63□□□□□ -2.15
PTX3P26022 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
PTX3P26022 MIR4264-201ENST00000583520 66 ntBASIC1.63□□□□□ -2.15
PTX3P26022 Y_RNA.470-201ENST00000384307 117 ntBASIC1.62□□□□□ -2.15
PTX3P26022 RNU6-429P-201ENST00000384582 108 ntBASIC1.62□□□□□ -2.15
PTX3P26022 MT-TI-201ENST00000387365 69 ntBASIC1.62□□□□□ -2.15
PTX3P26022 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.62□□□□□ -2.15
PTX3P26022 RNU6-412P-201ENST00000516434 106 ntBASIC1.62□□□□□ -2.15
PTX3P26022 AP000753.3-201ENST00000604083 169 ntBASIC1.62□□□□□ -2.15
PTX3P26022 MIR6129-201ENST00000616087 109 ntBASIC1.62□□□□□ -2.15
PTX3P26022 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
PTX3P26022 RN7SL429P-201ENST00000479090 223 ntBASIC1.61□□□□□ -2.15
PTX3P26022 RN7SL489P-201ENST00000486185 223 ntBASIC1.61□□□□□ -2.15
PTX3P26022 RN7SL327P-201ENST00000488659 223 ntBASIC1.61□□□□□ -2.15
PTX3P26022 RNU6-589P-201ENST00000516485 107 ntBASIC1.61□□□□□ -2.15
PTX3P26022 RNU6-295P-201ENST00000516901 104 ntBASIC1.61□□□□□ -2.15
PTX3P26022 MIR6845-201ENST00000613182 61 ntBASIC1.61□□□□□ -2.15
PTX3P26022 RN7SL853P-201ENST00000617250 223 ntBASIC1.61□□□□□ -2.15
PTX3P26022 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.61□□□□□ -2.15
PTX3P26022 MIR377-201ENST00000362145 69 ntBASIC1.6□□□□□ -2.15
PTX3P26022 Y_RNA.35-201ENST00000362601 101 ntBASIC1.6□□□□□ -2.15
PTX3P26022 MIR548D2-201ENST00000384955 97 ntBASIC1.6□□□□□ -2.15
PTX3P26022 SNORD77B-201ENST00000391112 67 ntBASIC1.6□□□□□ -2.15
PTX3P26022 SNORA26.9-201ENST00000391322 122 ntBASIC1.6□□□□□ -2.15
PTX3P26022 RNU7-6P-201ENST00000516845 62 ntBASIC1.6□□□□□ -2.15
PTX3P26022 Y_RNA.709-201ENST00000516952 92 ntBASIC1.6□□□□□ -2.15
PTX3P26022 MIR4255-201ENST00000579351 72 ntBASIC1.6□□□□□ -2.15
PTX3P26022 MIR548AE2-201ENST00000583456 67 ntBASIC1.6□□□□□ -2.15
PTX3P26022 MIR502-201ENST00000606349 86 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 249.7 ms