Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 RNU6-1211P-201ENST00000459179 105 ntBASIC1.18□□□□□ -2.22
ITM2AO43736 RPL23AP94-201ENST00000512518 302 ntBASIC1.18□□□□□ -2.22
ITM2AO43736 RNU2-35P-201ENST00000516446 142 ntBASIC1.18□□□□□ -2.22
ITM2AO43736 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
ITM2AO43736 SNORA1.1-201ENST00000364671 133 ntBASIC1.17□□□□□ -2.22
ITM2AO43736 RNA5SP95-201ENST00000410319 137 ntBASIC1.17□□□□□ -2.22
ITM2AO43736 Y_RNA.617-201ENST00000410920 90 ntBASIC1.17□□□□□ -2.22
ITM2AO43736 RNU11-2P-201ENST00000516898 142 ntBASIC1.17□□□□□ -2.22
ITM2AO43736 AC133485.4-201ENST00000561835 220 ntBASIC1.17□□□□□ -2.22
ITM2AO43736 AC138907.4-201ENST00000570107 226 ntBASIC1.17□□□□□ -2.22
ITM2AO43736 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.17□□□□□ -2.22
ITM2AO43736 Y_RNA.757-201ENST00000578934 114 ntBASIC1.17□□□□□ -2.22
ITM2AO43736 SNORA22.1-201ENST00000362701 134 ntBASIC1.16□□□□□ -2.22
ITM2AO43736 Y_RNA.171-201ENST00000363760 102 ntBASIC1.16□□□□□ -2.22
ITM2AO43736 Y_RNA.525-201ENST00000384570 113 ntBASIC1.16□□□□□ -2.22
ITM2AO43736 SNORD12C-201ENST00000386307 89 ntBASIC1.16□□□□□ -2.22
ITM2AO43736 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
ITM2AO43736 RNU4-61P-201ENST00000411243 107 ntBASIC1.16□□□□□ -2.22
ITM2AO43736 RPS3AP1-201ENST00000413190 320 ntBASIC1.16□□□□□ -2.22
ITM2AO43736 SNORA59A-201ENST00000459326 152 ntBASIC1.16□□□□□ -2.22
ITM2AO43736 SNORD79.1-201ENST00000516069 84 ntBASIC1.16□□□□□ -2.22
ITM2AO43736 RNU6-781P-201ENST00000516377 101 ntBASIC1.16□□□□□ -2.22
ITM2AO43736 RNU6-1234P-201ENST00000516877 103 ntBASIC1.16□□□□□ -2.22
ITM2AO43736 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.16□□□□□ -2.22
ITM2AO43736 MIR4305-201ENST00000583252 102 ntBASIC1.16□□□□□ -2.22
ITM2AO43736 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.16□□□□□ -2.22
ITM2AO43736 RNU6-396P-201ENST00000365369 105 ntBASIC1.15□□□□□ -2.23
ITM2AO43736 AL512326.2-201ENST00000426359 151 ntBASIC1.15□□□□□ -2.23
ITM2AO43736 RNU7-107P-201ENST00000459121 61 ntBASIC1.15□□□□□ -2.23
ITM2AO43736 RNU7-21P-201ENST00000459430 62 ntBASIC1.15□□□□□ -2.23
ITM2AO43736 RN7SKP19-201ENST00000516016 252 ntBASIC1.15□□□□□ -2.23
ITM2AO43736 RNU6-406P-201ENST00000516470 107 ntBASIC1.15□□□□□ -2.23
ITM2AO43736 RNU1-92P-201ENST00000517017 135 ntBASIC1.15□□□□□ -2.23
ITM2AO43736 MIR3152-201ENST00000579801 74 ntBASIC1.15□□□□□ -2.23
ITM2AO43736 AC021443.1-201ENST00000604478 211 ntBASIC1.15□□□□□ -2.23
ITM2AO43736 AL137067.1-201ENST00000615933 120 ntBASIC1.15□□□□□ -2.23
ITM2AO43736 SEPT14P17-201ENST00000617978 177 ntBASIC1.15□□□□□ -2.23
ITM2AO43736 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
ITM2AO43736 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
ITM2AO43736 Y_RNA.71-201ENST00000362892 104 ntBASIC1.14□□□□□ -2.23
ITM2AO43736 RNU6-959P-201ENST00000384671 107 ntBASIC1.14□□□□□ -2.23
ITM2AO43736 RNU6-613P-201ENST00000410412 108 ntBASIC1.14□□□□□ -2.23
ITM2AO43736 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.14□□□□□ -2.23
ITM2AO43736 RNU7-123P-201ENST00000515911 60 ntBASIC1.14□□□□□ -2.23
ITM2AO43736 MIR2115-201ENST00000516657 100 ntBASIC1.14□□□□□ -2.23
ITM2AO43736 uc_338.6-201ENST00000613544 171 ntBASIC1.14□□□□□ -2.23
ITM2AO43736 RNU6-647P-201ENST00000364243 107 ntBASIC1.13□□□□□ -2.23
ITM2AO43736 Y_RNA.298-201ENST00000364960 107 ntBASIC1.13□□□□□ -2.23
ITM2AO43736 MIR539-201ENST00000365690 78 ntBASIC1.13□□□□□ -2.23
ITM2AO43736 Y_RNA.470-201ENST00000384307 117 ntBASIC1.13□□□□□ -2.23
ITM2AO43736 SNORD38B-201ENST00000384690 67 ntBASIC1.13□□□□□ -2.23
ITM2AO43736 RNU6-1104P-201ENST00000384723 104 ntBASIC1.13□□□□□ -2.23
ITM2AO43736 RNA5SP261-201ENST00000410536 106 ntBASIC1.13□□□□□ -2.23
ITM2AO43736 AL591704.2-201ENST00000421658 181 ntBASIC1.13□□□□□ -2.23
ITM2AO43736 RNU7-164P-201ENST00000459221 62 ntBASIC1.13□□□□□ -2.23
ITM2AO43736 SNORA70.22-201ENST00000517160 124 ntBASIC1.13□□□□□ -2.23
ITM2AO43736 MIR6740-201ENST00000618268 113 ntBASIC1.13□□□□□ -2.23
ITM2AO43736 SNORD38B-202ENST00000625943 69 ntBASIC1.13□□□□□ -2.23
ITM2AO43736 AC132825.6-201ENST00000638861 357 ntBASIC1.13□□□□□ -2.23
ITM2AO43736 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
ITM2AO43736 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
ITM2AO43736 AL157777.2-201ENST00000258070 137 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 RNU6-580P-201ENST00000365159 107 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 Y_RNA.330-201ENST00000365230 109 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 SNORD113-1-201ENST00000365321 69 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 SNORA25-201ENST00000384384 134 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 SNORA80D-201ENST00000384488 135 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 MIRLET7F2-201ENST00000385277 83 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 MT-TI-201ENST00000387365 69 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 MT-TN-201ENST00000387400 73 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 RNU6-205P-201ENST00000390858 107 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 SNORA17.3-201ENST00000391159 129 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 Y_RNA.630-201ENST00000411370 108 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 RNY4P20-201ENST00000516678 93 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 AC036111.3-201ENST00000526389 112 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 AC004812.1-201ENST00000540773 146 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 AC022523.2-201ENST00000561045 150 ntBASIC1.12□□□□□ -2.23
ITM2AO43736 RNU1-17P-201ENST00000363022 152 ntBASIC1.11□□□□□ -2.23
ITM2AO43736 RNU6-80P-201ENST00000384195 107 ntBASIC1.11□□□□□ -2.23
ITM2AO43736 MIR4421-201ENST00000578133 69 ntBASIC1.11□□□□□ -2.23
ITM2AO43736 AC027335.2-201ENST00000624030 375 ntBASIC1.11□□□□□ -2.23
ITM2AO43736 SNORD115-2-201ENST00000362842 82 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 SNORD115-20-201ENST00000365099 82 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 SNORD58C-201ENST00000365223 64 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 RNU6-342P-201ENST00000384521 104 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 Y_RNA.531-201ENST00000384589 121 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 MIR563-201ENST00000385080 79 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 AC002429.1-201ENST00000437672 148 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 snoU13.2-201ENST00000459201 104 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 MIR1270-201ENST00000459320 83 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 snoU13.21-201ENST00000459368 105 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 AC113410.1-201ENST00000505029 247 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 RNU6-772P-201ENST00000516042 105 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 RNU6-659P-201ENST00000516454 104 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 MIR4264-201ENST00000583520 66 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 AL365222.1-201ENST00000614661 98 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 AC008163.1-202ENST00000636004 2889 ntBASIC1.1□□□□□ -2.23
ITM2AO43736 MIR377-201ENST00000362145 69 ntBASIC1.09□□□□□ -2.23
ITM2AO43736 MIR26B-201ENST00000362251 77 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms