Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.16□□□□□ -2.44
TREX1Q9NSU2 uc_338.22-201ENST00000622722 187 ntBASIC-0.16□□□□□ -2.44
TREX1Q9NSU2 SNORD113-8-201ENST00000363497 74 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 SNORD24-201ENST00000383884 75 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 MIR593-201ENST00000384856 100 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 MIR548A2-201ENST00000384956 97 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 MIR760-201ENST00000390220 80 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 RNU6-127P-201ENST00000390897 107 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 MIR1265-201ENST00000408444 86 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 AC098614.3-201ENST00000438957 440 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 SNORA31.14-201ENST00000516728 116 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 RNU2-31P-201ENST00000516954 155 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 AC131281.1-201ENST00000522984 164 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 MIR5692C2-201ENST00000577959 77 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 SNORD58B-201ENST00000607313 66 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 MIR6086-201ENST00000638065 55 ntBASIC-0.17□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 SNORD114-31-201ENST00000363219 75 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 RNU4-40P-201ENST00000364351 143 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 SNORA2A-201ENST00000383885 135 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 MIR145-201ENST00000384967 88 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 MIR548H2-201ENST00000408874 88 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 RNU6-130P-201ENST00000411112 103 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 AF228730.3-201ENST00000436691 102 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 RNU7-45P-201ENST00000459460 63 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 RNU6-504P-201ENST00000516568 104 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 AC040926.1-201ENST00000530195 238 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 C8orf59P2-201ENST00000603441 271 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 PART1_1.1-201ENST00000611761 217 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 MIR6082-201ENST00000613604 109 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 MIR6717-201ENST00000622747 73 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 MIR1302-1-201ENST00000637932 143 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 AC091304.10-201ENST00000641554 121 ntBASIC-0.18□□□□□ -2.44
TREX1Q9NSU2 RNU6-888P-201ENST00000363010 101 ntBASIC-0.19□□□□□ -2.44
TREX1Q9NSU2 RNU1-115P-201ENST00000365329 160 ntBASIC-0.19□□□□□ -2.44
TREX1Q9NSU2 RNU6-756P-201ENST00000383997 107 ntBASIC-0.19□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.19□□□□□ -2.44
TREX1Q9NSU2 SNORA72.6-201ENST00000384520 129 ntBASIC-0.19□□□□□ -2.44
TREX1Q9NSU2 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.19□□□□□ -2.44
TREX1Q9NSU2 MTCO2P24-201ENST00000515611 426 ntBASIC-0.19□□□□□ -2.44
TREX1Q9NSU2 RNU6-277P-201ENST00000516272 106 ntBASIC-0.19□□□□□ -2.44
TREX1Q9NSU2 RNA5SP476-201ENST00000516613 103 ntBASIC-0.19□□□□□ -2.44
TREX1Q9NSU2 MIR4743-201ENST00000584576 69 ntBASIC-0.19□□□□□ -2.44
TREX1Q9NSU2 AC124312.5-201ENST00000604451 268 ntBASIC-0.19□□□□□ -2.44
TREX1Q9NSU2 U6atac.1-201ENST00000616025 117 ntBASIC-0.19□□□□□ -2.44
TREX1Q9NSU2 MIR1295B-201ENST00000636144 60 ntBASIC-0.19□□□□□ -2.44
TREX1Q9NSU2 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.2□□□□□ -2.44
TREX1Q9NSU2 RNA5SP261-201ENST00000410536 106 ntBASIC-0.2□□□□□ -2.44
TREX1Q9NSU2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.2□□□□□ -2.44
TREX1Q9NSU2 RNU6-397P-201ENST00000516226 104 ntBASIC-0.2□□□□□ -2.44
TREX1Q9NSU2 RNU6-126P-201ENST00000516685 103 ntBASIC-0.2□□□□□ -2.44
TREX1Q9NSU2 RNU6-135P-201ENST00000516769 101 ntBASIC-0.2□□□□□ -2.44
TREX1Q9NSU2 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.2□□□□□ -2.44
TREX1Q9NSU2 MIR376A1-201ENST00000616574 68 ntBASIC-0.2□□□□□ -2.44
TREX1Q9NSU2 AL662814.1-201ENST00000617364 121 ntBASIC-0.2□□□□□ -2.44
TREX1Q9NSU2 MIR499B-201ENST00000636498 73 ntBASIC-0.2□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 RNU6-514P-201ENST00000384208 107 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 RNU6-102P-201ENST00000384485 104 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 MIR214-201ENST00000385214 110 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 U8.15-201ENST00000390947 134 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 SNORA26-201ENST00000391286 122 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 RNU6-507P-201ENST00000516045 100 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 MIR4636-201ENST00000582271 80 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 MIR4645-201ENST00000583158 77 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 AC006157.1-201ENST00000611750 366 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 MIR6828-201ENST00000636181 60 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.21□□□□□ -2.44
TREX1Q9NSU2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 RNA5SP128-201ENST00000365305 116 ntBASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 RNU6-929P-201ENST00000384429 107 ntBASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 PMCHL1-202ENST00000423102 261 ntBASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 RNA5SP47-201ENST00000517230 109 ntBASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 MIR4491-201ENST00000581087 68 ntBASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 AC006006.1-201ENST00000603082 144 ntBASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 AL133255.1-201ENST00000606374 441 ntBASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 AC112487.2-201ENST00000637950 304 ntBASIC-0.22□□□□□ -2.44
TREX1Q9NSU2 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 230.7 ms