Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 RNA5SP193-201ENST00000410353 107 ntBASIC1□□□□□ -2.25
ZNF541Q9H0D2 AC087499.4-201ENST00000448505 178 ntBASIC1□□□□□ -2.25
ZNF541Q9H0D2 RNU4-71P-201ENST00000516258 113 ntBASIC1□□□□□ -2.25
ZNF541Q9H0D2 AC133485.1-201ENST00000567176 124 ntBASIC1□□□□□ -2.25
ZNF541Q9H0D2 AC138907.6-201ENST00000568401 126 ntBASIC1□□□□□ -2.25
ZNF541Q9H0D2 HSPE1P19-201ENST00000603327 295 ntBASIC1□□□□□ -2.25
ZNF541Q9H0D2 RNU1-124P-201ENST00000363861 145 ntBASIC0.99□□□□□ -2.25
ZNF541Q9H0D2 RNU6-396P-201ENST00000365369 105 ntBASIC0.99□□□□□ -2.25
ZNF541Q9H0D2 SNORA22-201ENST00000383907 134 ntBASIC0.99□□□□□ -2.25
ZNF541Q9H0D2 SNORA22C-201ENST00000384614 134 ntBASIC0.99□□□□□ -2.25
ZNF541Q9H0D2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.99□□□□□ -2.25
ZNF541Q9H0D2 RNU6-938P-201ENST00000411285 103 ntBASIC0.99□□□□□ -2.25
ZNF541Q9H0D2 SNORD124-201ENST00000459577 104 ntBASIC0.99□□□□□ -2.25
ZNF541Q9H0D2 RNU11-2P-201ENST00000516898 142 ntBASIC0.99□□□□□ -2.25
ZNF541Q9H0D2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
ZNF541Q9H0D2 AC097639.2-201ENST00000603159 172 ntBASIC0.99□□□□□ -2.25
ZNF541Q9H0D2 RNU2-4P-201ENST00000606190 192 ntBASIC0.99□□□□□ -2.25
ZNF541Q9H0D2 MTND1P7-201ENST00000632801 297 ntBASIC0.99□□□□□ -2.25
ZNF541Q9H0D2 MIR330-201ENST00000362196 94 ntBASIC0.98□□□□□ -2.25
ZNF541Q9H0D2 RNU6-888P-201ENST00000363010 101 ntBASIC0.98□□□□□ -2.25
ZNF541Q9H0D2 MIR508-201ENST00000384857 115 ntBASIC0.98□□□□□ -2.25
ZNF541Q9H0D2 MIR200A-201ENST00000384875 90 ntBASIC0.98□□□□□ -2.25
ZNF541Q9H0D2 MIR1185-1-201ENST00000408598 86 ntBASIC0.98□□□□□ -2.25
ZNF541Q9H0D2 MIR1302-7-201ENST00000408841 72 ntBASIC0.98□□□□□ -2.25
ZNF541Q9H0D2 RNU6-994P-201ENST00000410507 111 ntBASIC0.98□□□□□ -2.25
ZNF541Q9H0D2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.98□□□□□ -2.25
ZNF541Q9H0D2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.98□□□□□ -2.25
ZNF541Q9H0D2 AC067940.1-201ENST00000458411 300 ntBASIC0.98□□□□□ -2.25
ZNF541Q9H0D2 UBL5P1-201ENST00000507979 193 ntBASIC0.98□□□□□ -2.25
ZNF541Q9H0D2 RNU2-13P-201ENST00000515909 113 ntBASIC0.98□□□□□ -2.25
ZNF541Q9H0D2 AC134878.1-201ENST00000619901 243 ntBASIC0.98□□□□□ -2.25
ZNF541Q9H0D2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
ZNF541Q9H0D2 Y_RNA.23-201ENST00000362496 106 ntBASIC0.97□□□□□ -2.25
ZNF541Q9H0D2 Y_RNA.37-201ENST00000362606 108 ntBASIC0.97□□□□□ -2.25
ZNF541Q9H0D2 RNU6-379P-201ENST00000363813 104 ntBASIC0.97□□□□□ -2.25
ZNF541Q9H0D2 RNU6-728P-201ENST00000365375 104 ntBASIC0.97□□□□□ -2.25
ZNF541Q9H0D2 RNU6-716P-201ENST00000365621 103 ntBASIC0.97□□□□□ -2.25
ZNF541Q9H0D2 SNORD24-201ENST00000383884 75 ntBASIC0.97□□□□□ -2.25
ZNF541Q9H0D2 MIR19B1-201ENST00000384829 87 ntBASIC0.97□□□□□ -2.25
ZNF541Q9H0D2 RNA5SP153-201ENST00000516498 76 ntBASIC0.97□□□□□ -2.25
ZNF541Q9H0D2 MIR2115-201ENST00000516657 100 ntBASIC0.97□□□□□ -2.25
ZNF541Q9H0D2 RNU6-1271P-201ENST00000517049 105 ntBASIC0.97□□□□□ -2.25
ZNF541Q9H0D2 AP003484.1-201ENST00000530974 250 ntBASIC0.97□□□□□ -2.25
ZNF541Q9H0D2 MIR4744-201ENST00000581563 82 ntBASIC0.97□□□□□ -2.25
ZNF541Q9H0D2 AC009779.6-201ENST00000603972 165 ntBASIC0.97□□□□□ -2.25
ZNF541Q9H0D2 MIR342-201ENST00000362212 99 ntBASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 Y_RNA.7-201ENST00000362352 102 ntBASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 RNU6-103P-201ENST00000363686 107 ntBASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 Y_RNA.188-201ENST00000363952 111 ntBASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 SNORA2B-201ENST00000384583 137 ntBASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 SNORA40.5-201ENST00000391061 128 ntBASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 RNA5SP127-201ENST00000411051 133 ntBASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 AF228730.3-201ENST00000436691 102 ntBASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 FABP5P4-201ENST00000437203 171 ntBASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 AL121914.1-201ENST00000450188 156 ntBASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 RNU6-197P-201ENST00000516680 100 ntBASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 AC130289.1-201ENST00000577321 73 ntBASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 MIR548AO-201ENST00000579992 96 ntBASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 MIR4661-201ENST00000582720 75 ntBASIC0.96□□□□□ -2.26
ZNF541Q9H0D2 MIR411-201ENST00000362239 96 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-34-201ENST00000362441 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-12-201ENST00000362583 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-29-201ENST00000362834 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-9-201ENST00000362912 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-21-201ENST00000362963 81 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-14-201ENST00000363090 81 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-13-201ENST00000363358 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-41-201ENST00000363608 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-11-201ENST00000363616 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-5-201ENST00000363633 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-39-201ENST00000363694 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-4-201ENST00000363810 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-16-201ENST00000363887 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-6-201ENST00000363942 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 Y_RNA.200-201ENST00000364018 102 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-42-201ENST00000364273 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-15-201ENST00000364809 81 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-1-201ENST00000364961 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-26-201ENST00000365067 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-10-201ENST00000365073 81 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-43-201ENST00000365503 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-36-201ENST00000365629 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 Y_RNA.401-201ENST00000383965 117 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORA1-201ENST00000384107 130 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORA27-201ENST00000384323 126 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 Y_RNA.489-201ENST00000384410 101 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 Y_RNA.571-201ENST00000384753 98 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 RNU6-578P-201ENST00000390980 103 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 RNU6-918P-201ENST00000391219 106 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 RNU4-43P-201ENST00000410628 137 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 AL392103.1-201ENST00000447000 198 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD36C-201ENST00000516733 66 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 AC036111.3-201ENST00000526389 112 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 MIR4711-201ENST00000578274 70 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 AP000753.3-201ENST00000604083 169 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD115-40-201ENST00000606510 82 ntBASIC0.95□□□□□ -2.26
ZNF541Q9H0D2 SNORD113.3-201ENST00000364630 78 ntBASIC0.94□□□□□ -2.26
ZNF541Q9H0D2 RNU6-47P-201ENST00000383866 107 ntBASIC0.94□□□□□ -2.26
ZNF541Q9H0D2 MT-TG-201ENST00000387429 68 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 219.6 ms