Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNU6-616P-201ENST00000384353 107 ntBASIC2.25□□□□□ -2.05
YBX1P67809 RNU4-53P-201ENST00000410828 140 ntBASIC2.25□□□□□ -2.05
YBX1P67809 HMGN2P3-201ENST00000433603 273 ntBASIC2.25□□□□□ -2.05
YBX1P67809 HMGN2P5-201ENST00000436882 273 ntBASIC2.25□□□□□ -2.05
YBX1P67809 RPS29P29-201ENST00000456396 171 ntBASIC2.25□□□□□ -2.05
YBX1P67809 RNU7-34P-201ENST00000459394 64 ntBASIC2.25□□□□□ -2.05
YBX1P67809 RNU6-162P-201ENST00000516228 103 ntBASIC2.25□□□□□ -2.05
YBX1P67809 SNORA31.11-201ENST00000516528 139 ntBASIC2.25□□□□□ -2.05
YBX1P67809 MIR4529-201ENST00000578110 78 ntBASIC2.25□□□□□ -2.05
YBX1P67809 MIR5194-201ENST00000582634 120 ntBASIC2.25□□□□□ -2.05
YBX1P67809 MIR4791-201ENST00000607666 84 ntBASIC2.25□□□□□ -2.05
YBX1P67809 AC016717.2-201ENST00000609089 5141 ntBASIC2.25□□□□□ -2.05
YBX1P67809 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.25□□□□□ -2.05
YBX1P67809 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
YBX1P67809 RNU6-170P-201ENST00000362832 104 ntBASIC2.24□□□□□ -2.05
YBX1P67809 RNY1P10-201ENST00000363268 113 ntBASIC2.24□□□□□ -2.05
YBX1P67809 Y_RNA.470-201ENST00000384307 117 ntBASIC2.24□□□□□ -2.05
YBX1P67809 SNORA18-201ENST00000384416 132 ntBASIC2.24□□□□□ -2.05
YBX1P67809 MIR520A-201ENST00000384862 85 ntBASIC2.24□□□□□ -2.05
YBX1P67809 RNA5SP465-201ENST00000391195 109 ntBASIC2.24□□□□□ -2.05
YBX1P67809 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.24□□□□□ -2.05
YBX1P67809 RNA5SP261-201ENST00000410536 106 ntBASIC2.24□□□□□ -2.05
YBX1P67809 RNU6-592P-201ENST00000411333 103 ntBASIC2.24□□□□□ -2.05
YBX1P67809 AL356320.1-201ENST00000429616 163 ntBASIC2.24□□□□□ -2.05
YBX1P67809 SCARNA16.3-201ENST00000516595 184 ntBASIC2.24□□□□□ -2.05
YBX1P67809 MIR548AE2-201ENST00000583456 67 ntBASIC2.24□□□□□ -2.05
YBX1P67809 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.24□□□□□ -2.05
YBX1P67809 AL353997.5-201ENST00000618886 171 ntBASIC2.24□□□□□ -2.05
YBX1P67809 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
YBX1P67809 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.23□□□□□ -2.05
YBX1P67809 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.23□□□□□ -2.05
YBX1P67809 MIR1289-2-201ENST00000408360 111 ntBASIC2.23□□□□□ -2.05
YBX1P67809 MIR1283-2-201ENST00000408621 87 ntBASIC2.23□□□□□ -2.05
YBX1P67809 AC004941.2-201ENST00000427009 228 ntBASIC2.23□□□□□ -2.05
YBX1P67809 DNAJC19P9-201ENST00000555084 351 ntBASIC2.23□□□□□ -2.05
YBX1P67809 MIR548Z-201ENST00000584743 97 ntBASIC2.23□□□□□ -2.05
YBX1P67809 SNORD14A-201ENST00000606526 91 ntBASIC2.23□□□□□ -2.05
YBX1P67809 U7.3-201ENST00000616123 62 ntBASIC2.23□□□□□ -2.05
YBX1P67809 AC243994.1-201ENST00000618627 109 ntBASIC2.23□□□□□ -2.05
YBX1P67809 Y_RNA.17-201ENST00000362433 111 ntBASIC2.22□□□□□ -2.05
YBX1P67809 SNORD115-2-201ENST00000362842 82 ntBASIC2.22□□□□□ -2.05
YBX1P67809 RNA5SP99-201ENST00000364020 114 ntBASIC2.22□□□□□ -2.05
YBX1P67809 SNORD115-20-201ENST00000365099 82 ntBASIC2.22□□□□□ -2.05
YBX1P67809 RNU6-679P-201ENST00000391003 106 ntBASIC2.22□□□□□ -2.05
YBX1P67809 RNU6-1190P-201ENST00000410811 104 ntBASIC2.22□□□□□ -2.05
YBX1P67809 SNORD123-201ENST00000459473 70 ntBASIC2.22□□□□□ -2.05
YBX1P67809 SNORA31.15-201ENST00000516771 132 ntBASIC2.22□□□□□ -2.05
YBX1P67809 AC022254.1-201ENST00000567857 235 ntBASIC2.22□□□□□ -2.05
YBX1P67809 MIR4709-201ENST00000577272 72 ntBASIC2.22□□□□□ -2.05
YBX1P67809 MIR548AR-201ENST00000582191 57 ntBASIC2.22□□□□□ -2.05
YBX1P67809 MIR6717-201ENST00000622747 73 ntBASIC2.22□□□□□ -2.05
YBX1P67809 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
YBX1P67809 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
YBX1P67809 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
YBX1P67809 Y_RNA.4-201ENST00000362333 112 ntBASIC2.21□□□□□ -2.06
YBX1P67809 SNORA32-201ENST00000384072 121 ntBASIC2.21□□□□□ -2.06
YBX1P67809 MIR518A2-201ENST00000384966 87 ntBASIC2.21□□□□□ -2.06
YBX1P67809 SNORD28B-201ENST00000390993 75 ntBASIC2.21□□□□□ -2.06
YBX1P67809 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
YBX1P67809 Y_RNA.593-201ENST00000410292 98 ntBASIC2.21□□□□□ -2.06
YBX1P67809 RN7SKP223-201ENST00000410582 62 ntBASIC2.21□□□□□ -2.06
YBX1P67809 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.21□□□□□ -2.06
YBX1P67809 AL353813.1-201ENST00000440700 253 ntBASIC2.21□□□□□ -2.06
YBX1P67809 AC104435.1-201ENST00000483483 166 ntBASIC2.21□□□□□ -2.06
YBX1P67809 Y_RNA.659-201ENST00000515994 113 ntBASIC2.21□□□□□ -2.06
YBX1P67809 RNU6-521P-201ENST00000516663 105 ntBASIC2.21□□□□□ -2.06
YBX1P67809 RNA5SP437-201ENST00000517249 129 ntBASIC2.21□□□□□ -2.06
YBX1P67809 AC021506.2-201ENST00000612354 169 ntBASIC2.21□□□□□ -2.06
YBX1P67809 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.21□□□□□ -2.06
YBX1P67809 AL512310.12-203ENST00000640543 90 ntBASIC2.21□□□□□ -2.06
YBX1P67809 RNA5SP393-201ENST00000363423 117 ntBASIC2.2□□□□□ -2.06
YBX1P67809 SNORD45B-201ENST00000364617 72 ntBASIC2.2□□□□□ -2.06
YBX1P67809 RNU6-60P-201ENST00000364792 103 ntBASIC2.2□□□□□ -2.06
YBX1P67809 RNU6-1152P-201ENST00000384576 107 ntBASIC2.2□□□□□ -2.06
YBX1P67809 RNU6-913P-201ENST00000390913 95 ntBASIC2.2□□□□□ -2.06
YBX1P67809 RNU6-1275P-201ENST00000391087 107 ntBASIC2.2□□□□□ -2.06
YBX1P67809 SNORA26.6-201ENST00000391256 115 ntBASIC2.2□□□□□ -2.06
YBX1P67809 HMGN2P39-201ENST00000398005 273 ntBASIC2.2□□□□□ -2.06
YBX1P67809 AC096949.1-201ENST00000412047 152 ntBASIC2.2□□□□□ -2.06
YBX1P67809 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.2□□□□□ -2.06
YBX1P67809 MIR5007-201ENST00000583098 95 ntBASIC2.2□□□□□ -2.06
YBX1P67809 SNORD3E-202ENST00000627253 216 ntBASIC2.2□□□□□ -2.06
YBX1P67809 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.2□□□□□ -2.06
YBX1P67809 MIR6841-201ENST00000637129 72 ntBASIC2.2□□□□□ -2.06
YBX1P67809 AC091304.10-201ENST00000641554 121 ntBASIC2.2□□□□□ -2.06
YBX1P67809 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
YBX1P67809 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
YBX1P67809 Y_RNA.226-201ENST00000364337 114 ntBASIC2.19□□□□□ -2.06
YBX1P67809 Y_RNA.338-201ENST00000365320 114 ntBASIC2.19□□□□□ -2.06
YBX1P67809 SNORA24-201ENST00000384096 131 ntBASIC2.19□□□□□ -2.06
YBX1P67809 SNORA48.1-201ENST00000390879 135 ntBASIC2.19□□□□□ -2.06
YBX1P67809 MRPL35P3-201ENST00000421557 364 ntBASIC2.19□□□□□ -2.06
YBX1P67809 RNU7-73P-201ENST00000458743 63 ntBASIC2.19□□□□□ -2.06
YBX1P67809 RNU2-13P-201ENST00000515909 113 ntBASIC2.19□□□□□ -2.06
YBX1P67809 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.19□□□□□ -2.06
YBX1P67809 SUB1P4-201ENST00000566062 339 ntBASIC2.19□□□□□ -2.06
YBX1P67809 MIR4777-201ENST00000583710 86 ntBASIC2.19□□□□□ -2.06
YBX1P67809 AL020996.3-201ENST00000606617 222 ntBASIC2.19□□□□□ -2.06
YBX1P67809 IGLL4P-201ENST00000614590 133 ntBASIC2.19□□□□□ -2.06
YBX1P67809 U1.36-201ENST00000620684 176 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms