Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 RNU6-1076P-201ENST00000410397 104 ntBASIC0.23□□□□□ -2.37
MSH6P52701 RNU6-355P-201ENST00000410427 104 ntBASIC0.23□□□□□ -2.37
MSH6P52701 RNU6-791P-201ENST00000410467 104 ntBASIC0.23□□□□□ -2.37
MSH6P52701 RNU6-121P-201ENST00000410525 99 ntBASIC0.23□□□□□ -2.37
MSH6P52701 RNU6-705P-201ENST00000410601 104 ntBASIC0.23□□□□□ -2.37
MSH6P52701 RNU6-1100P-201ENST00000410691 104 ntBASIC0.23□□□□□ -2.37
MSH6P52701 RNU6-860P-201ENST00000410860 104 ntBASIC0.23□□□□□ -2.37
MSH6P52701 RNU6-1217P-201ENST00000411276 104 ntBASIC0.23□□□□□ -2.37
MSH6P52701 RNU6-785P-201ENST00000411324 104 ntBASIC0.23□□□□□ -2.37
MSH6P52701 RPS29P24-201ENST00000486345 171 ntBASIC0.23□□□□□ -2.37
MSH6P52701 RNU2-31P-201ENST00000516954 155 ntBASIC0.23□□□□□ -2.37
MSH6P52701 AC100767.1-201ENST00000528178 123 ntBASIC0.23□□□□□ -2.37
MSH6P52701 MIR548S-201ENST00000581352 82 ntBASIC0.23□□□□□ -2.37
MSH6P52701 AC008608.1-201ENST00000603910 127 ntBASIC0.23□□□□□ -2.37
MSH6P52701 U6.90-201ENST00000614007 104 ntBASIC0.23□□□□□ -2.37
MSH6P52701 U6.70-201ENST00000620287 104 ntBASIC0.23□□□□□ -2.37
MSH6P52701 AC010332.2-201ENST00000613083 1904 ntBASIC0.23□□□□□ -2.37
MSH6P52701 Y_RNA.293-201ENST00000364908 93 ntBASIC0.22□□□□□ -2.37
MSH6P52701 RNU6-290P-201ENST00000365212 101 ntBASIC0.22□□□□□ -2.37
MSH6P52701 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
MSH6P52701 RNY3P14-201ENST00000384309 102 ntBASIC0.22□□□□□ -2.37
MSH6P52701 MIR518A1-201ENST00000385068 85 ntBASIC0.22□□□□□ -2.37
MSH6P52701 MIR563-201ENST00000385080 79 ntBASIC0.22□□□□□ -2.37
MSH6P52701 RNU6-1165P-201ENST00000410119 107 ntBASIC0.22□□□□□ -2.37
MSH6P52701 MTND4LP30-201ENST00000454092 297 ntBASIC0.22□□□□□ -2.37
MSH6P52701 RNU7-185P-201ENST00000459215 60 ntBASIC0.22□□□□□ -2.37
MSH6P52701 RNU6-126P-201ENST00000516685 103 ntBASIC0.22□□□□□ -2.37
MSH6P52701 SNORD92-201ENST00000585078 85 ntBASIC0.22□□□□□ -2.37
MSH6P52701 MIR369-201ENST00000362155 70 ntBASIC0.21□□□□□ -2.38
MSH6P52701 RNU6-888P-201ENST00000363010 101 ntBASIC0.21□□□□□ -2.38
MSH6P52701 Y_RNA.217-201ENST00000364214 105 ntBASIC0.21□□□□□ -2.38
MSH6P52701 RNA5SP368-201ENST00000364298 116 ntBASIC0.21□□□□□ -2.38
MSH6P52701 RNA5SP517-201ENST00000364724 117 ntBASIC0.21□□□□□ -2.38
MSH6P52701 RNU6-364P-201ENST00000384387 107 ntBASIC0.21□□□□□ -2.38
MSH6P52701 MT-TD-201ENST00000387419 68 ntBASIC0.21□□□□□ -2.38
MSH6P52701 RNU7-102P-201ENST00000458948 62 ntBASIC0.21□□□□□ -2.38
MSH6P52701 Y_RNA.641-201ENST00000459414 105 ntBASIC0.21□□□□□ -2.38
MSH6P52701 SNORA25.12-201ENST00000516202 82 ntBASIC0.21□□□□□ -2.38
MSH6P52701 SNORA27.4-201ENST00000516650 95 ntBASIC0.21□□□□□ -2.38
MSH6P52701 SNORD36C-201ENST00000516733 66 ntBASIC0.21□□□□□ -2.38
MSH6P52701 RNU6-365P-201ENST00000517113 106 ntBASIC0.21□□□□□ -2.38
MSH6P52701 RNU7-156P-201ENST00000517214 74 ntBASIC0.21□□□□□ -2.38
MSH6P52701 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.21□□□□□ -2.38
MSH6P52701 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.21□□□□□ -2.38
MSH6P52701 snoU18.1-201ENST00000629629 71 ntBASIC0.21□□□□□ -2.38
MSH6P52701 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.21□□□□□ -2.38
MSH6P52701 MIR103A1-201ENST00000362165 78 ntBASIC0.2□□□□□ -2.38
MSH6P52701 snoU2_19.2-201ENST00000363024 80 ntBASIC0.2□□□□□ -2.38
MSH6P52701 RNU6-1309P-201ENST00000363305 108 ntBASIC0.2□□□□□ -2.38
MSH6P52701 SNORA1.1-201ENST00000364671 133 ntBASIC0.2□□□□□ -2.38
MSH6P52701 RNU6-662P-201ENST00000384253 104 ntBASIC0.2□□□□□ -2.38
MSH6P52701 Y_RNA.541-201ENST00000384640 113 ntBASIC0.2□□□□□ -2.38
MSH6P52701 SNORA40.8-201ENST00000411034 126 ntBASIC0.2□□□□□ -2.38
MSH6P52701 Y_RNA.631-201ENST00000459607 101 ntBASIC0.2□□□□□ -2.38
MSH6P52701 RNU6-504P-201ENST00000516568 104 ntBASIC0.2□□□□□ -2.38
MSH6P52701 Y_RNA.721-201ENST00000517207 102 ntBASIC0.2□□□□□ -2.38
MSH6P52701 IGLVI-20-201ENST00000519296 130 ntBASIC0.2□□□□□ -2.38
MSH6P52701 MIR30D-201ENST00000362283 70 ntBASIC0.19□□□□□ -2.38
MSH6P52701 RNU6-770P-201ENST00000363929 105 ntBASIC0.19□□□□□ -2.38
MSH6P52701 RNU6-450P-201ENST00000364654 107 ntBASIC0.19□□□□□ -2.38
MSH6P52701 Y_RNA.380-201ENST00000365663 111 ntBASIC0.19□□□□□ -2.38
MSH6P52701 Y_RNA.394-201ENST00000383942 103 ntBASIC0.19□□□□□ -2.38
MSH6P52701 Y_RNA.419-201ENST00000384041 102 ntBASIC0.19□□□□□ -2.38
MSH6P52701 Y_RNA.431-201ENST00000384086 102 ntBASIC0.19□□□□□ -2.38
MSH6P52701 SNORD77.3-201ENST00000391113 65 ntBASIC0.19□□□□□ -2.38
MSH6P52701 SNORA53-201ENST00000391141 249 ntBASIC0.19□□□□□ -2.38
MSH6P52701 RNU6-101P-201ENST00000410323 104 ntBASIC0.19□□□□□ -2.38
MSH6P52701 ELOCP20-201ENST00000422460 345 ntBASIC0.19□□□□□ -2.38
MSH6P52701 RNA5SP94-201ENST00000516917 108 ntBASIC0.19□□□□□ -2.38
MSH6P52701 MIR4801-201ENST00000582704 82 ntBASIC0.19□□□□□ -2.38
MSH6P52701 AL008718.3-201ENST00000610217 321 ntBASIC0.19□□□□□ -2.38
MSH6P52701 Y_RNA.802-201ENST00000614892 130 ntBASIC0.19□□□□□ -2.38
MSH6P52701 Y_RNA.28-201ENST00000362554 111 ntBASIC0.19□□□□□ -2.38
MSH6P52701 Y_RNA.66-201ENST00000362862 102 ntBASIC0.19□□□□□ -2.38
MSH6P52701 Y_RNA.214-201ENST00000364201 112 ntBASIC0.19□□□□□ -2.38
MSH6P52701 Y_RNA.389-201ENST00000383924 113 ntBASIC0.19□□□□□ -2.38
MSH6P52701 MIR215-201ENST00000384858 110 ntBASIC0.19□□□□□ -2.38
MSH6P52701 SNORD12C-201ENST00000386307 89 ntBASIC0.19□□□□□ -2.38
MSH6P52701 AF228730.3-201ENST00000436691 102 ntBASIC0.19□□□□□ -2.38
MSH6P52701 RNU2-11P-201ENST00000459191 187 ntBASIC0.19□□□□□ -2.38
MSH6P52701 AP003733.2-201ENST00000529409 171 ntBASIC0.19□□□□□ -2.38
MSH6P52701 AC022523.2-201ENST00000561045 150 ntBASIC0.19□□□□□ -2.38
MSH6P52701 AC078938.1-201ENST00000620993 318 ntBASIC0.19□□□□□ -2.38
MSH6P52701 SNORA25.1-201ENST00000362326 128 ntBASIC0.18□□□□□ -2.38
MSH6P52701 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
MSH6P52701 RNU4-10P-201ENST00000364383 140 ntBASIC0.18□□□□□ -2.38
MSH6P52701 Y_RNA.410-201ENST00000383992 113 ntBASIC0.18□□□□□ -2.38
MSH6P52701 MIR1257-201ENST00000408490 117 ntBASIC0.18□□□□□ -2.38
MSH6P52701 RNU2-55P-201ENST00000411146 174 ntBASIC0.18□□□□□ -2.38
MSH6P52701 SNRPGP12-201ENST00000449481 213 ntBASIC0.18□□□□□ -2.38
MSH6P52701 RNU7-96P-201ENST00000459535 64 ntBASIC0.18□□□□□ -2.38
MSH6P52701 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.18□□□□□ -2.38
MSH6P52701 RNU6-998P-201ENST00000515894 101 ntBASIC0.18□□□□□ -2.38
MSH6P52701 RNU6-1270P-201ENST00000517128 108 ntBASIC0.18□□□□□ -2.38
MSH6P52701 MIR3678-201ENST00000578455 94 ntBASIC0.18□□□□□ -2.38
MSH6P52701 MIR371B-201ENST00000638082 66 ntBASIC0.18□□□□□ -2.38
MSH6P52701 UBE2WP1-201ENST00000362030 340 ntBASIC0.17□□□□□ -2.38
MSH6P52701 RNA5SP117-201ENST00000365294 118 ntBASIC0.17□□□□□ -2.38
MSH6P52701 RNU6-474P-201ENST00000384243 107 ntBASIC0.17□□□□□ -2.38
MSH6P52701 MIR626-201ENST00000385032 94 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms