Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 Y_RNA.351-201ENST00000365436 96 ntBASIC1.71□□□□□ -2.14
RHOP08100 Y_RNA.494-201ENST00000384432 111 ntBASIC1.71□□□□□ -2.14
RHOP08100 MIR30A-201ENST00000385092 71 ntBASIC1.71□□□□□ -2.14
RHOP08100 AC008834.1-201ENST00000511612 175 ntBASIC1.71□□□□□ -2.14
RHOP08100 RNU5E-3P-201ENST00000515913 68 ntBASIC1.71□□□□□ -2.14
RHOP08100 RNU7-70P-201ENST00000516941 66 ntBASIC1.71□□□□□ -2.14
RHOP08100 SNORA74.3-201ENST00000517108 154 ntBASIC1.71□□□□□ -2.14
RHOP08100 AC015688.6-201ENST00000577737 104 ntBASIC1.71□□□□□ -2.14
RHOP08100 SNORD53B-201ENST00000577887 78 ntBASIC1.71□□□□□ -2.14
RHOP08100 SNORA77B-201ENST00000578179 125 ntBASIC1.71□□□□□ -2.14
RHOP08100 U6.95-201ENST00000636931 70 ntBASIC1.71□□□□□ -2.14
RHOP08100 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.7□□□□□ -2.14
RHOP08100 Y_RNA.370-201ENST00000365589 108 ntBASIC1.7□□□□□ -2.14
RHOP08100 SNORA70.7-201ENST00000384159 133 ntBASIC1.7□□□□□ -2.14
RHOP08100 RNY1P6-201ENST00000384193 109 ntBASIC1.7□□□□□ -2.14
RHOP08100 Y_RNA.525-201ENST00000384570 113 ntBASIC1.7□□□□□ -2.14
RHOP08100 MIR513A1-201ENST00000385138 129 ntBASIC1.7□□□□□ -2.14
RHOP08100 AC107297.1-201ENST00000459991 176 ntBASIC1.7□□□□□ -2.14
RHOP08100 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.7□□□□□ -2.14
RHOP08100 TRMT112P2-201ENST00000512910 132 ntBASIC1.7□□□□□ -2.14
RHOP08100 RN7SKP19-201ENST00000516016 252 ntBASIC1.7□□□□□ -2.14
RHOP08100 IGKV1-22-201ENST00000524313 326 ntBASIC1.7□□□□□ -2.14
RHOP08100 FAM106DP-201ENST00000586416 501 ntBASIC1.7□□□□□ -2.14
RHOP08100 AL645939.4-201ENST00000604495 135 ntBASIC1.7□□□□□ -2.14
RHOP08100 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.7□□□□□ -2.14
RHOP08100 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RHOP08100 RNY1P10-201ENST00000363268 113 ntBASIC1.69□□□□□ -2.14
RHOP08100 RNU1-42P-201ENST00000364033 160 ntBASIC1.69□□□□□ -2.14
RHOP08100 Y_RNA.353-201ENST00000365440 108 ntBASIC1.69□□□□□ -2.14
RHOP08100 AL035398.1-201ENST00000430869 322 ntBASIC1.69□□□□□ -2.14
RHOP08100 RNU6-781P-201ENST00000516377 101 ntBASIC1.69□□□□□ -2.14
RHOP08100 RNU7-43P-201ENST00000516554 64 ntBASIC1.69□□□□□ -2.14
RHOP08100 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.69□□□□□ -2.14
RHOP08100 SUMO2P16-201ENST00000519475 264 ntBASIC1.69□□□□□ -2.14
RHOP08100 AC133485.4-201ENST00000561835 220 ntBASIC1.69□□□□□ -2.14
RHOP08100 AC138907.4-201ENST00000570107 226 ntBASIC1.69□□□□□ -2.14
RHOP08100 MIR548AR-201ENST00000582191 57 ntBASIC1.69□□□□□ -2.14
RHOP08100 MIR8074-201ENST00000615081 81 ntBASIC1.69□□□□□ -2.14
RHOP08100 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RHOP08100 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RHOP08100 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
RHOP08100 RNU6-60P-201ENST00000364792 103 ntBASIC1.68□□□□□ -2.14
RHOP08100 Y_RNA.366-201ENST00000365540 102 ntBASIC1.68□□□□□ -2.14
RHOP08100 Y_RNA.537-201ENST00000384626 109 ntBASIC1.68□□□□□ -2.14
RHOP08100 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
RHOP08100 SNORD28B-201ENST00000390993 75 ntBASIC1.68□□□□□ -2.14
RHOP08100 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.68□□□□□ -2.14
RHOP08100 RNU6-1061P-201ENST00000516530 99 ntBASIC1.68□□□□□ -2.14
RHOP08100 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.68□□□□□ -2.14
RHOP08100 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
RHOP08100 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.68□□□□□ -2.14
RHOP08100 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.68□□□□□ -2.14
RHOP08100 AL137067.1-201ENST00000615933 120 ntBASIC1.68□□□□□ -2.14
RHOP08100 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.68□□□□□ -2.14
RHOP08100 WWP1P1-201ENST00000466609 2769 ntBASIC1.67□□□□□ -2.14
RHOP08100 RNU6-690P-201ENST00000365242 106 ntBASIC1.67□□□□□ -2.14
RHOP08100 MIR934-201ENST00000401241 83 ntBASIC1.67□□□□□ -2.14
RHOP08100 RNA5SP136-201ENST00000410906 107 ntBASIC1.67□□□□□ -2.14
RHOP08100 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
RHOP08100 RPS29P29-201ENST00000456396 171 ntBASIC1.67□□□□□ -2.14
RHOP08100 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.67□□□□□ -2.14
RHOP08100 RNU6-322P-201ENST00000516010 103 ntBASIC1.67□□□□□ -2.14
RHOP08100 SNORA31.4-201ENST00000516049 129 ntBASIC1.67□□□□□ -2.14
RHOP08100 RNU6-240P-201ENST00000516098 97 ntBASIC1.67□□□□□ -2.14
RHOP08100 RNU7-53P-201ENST00000516705 60 ntBASIC1.67□□□□□ -2.14
RHOP08100 AC106754.2-201ENST00000623006 233 ntBASIC1.67□□□□□ -2.14
RHOP08100 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
RHOP08100 RNA5SP259-201ENST00000365541 109 ntBASIC1.66□□□□□ -2.14
RHOP08100 Y_RNA.630-201ENST00000411370 108 ntBASIC1.66□□□□□ -2.14
RHOP08100 RNU7-73P-201ENST00000458743 63 ntBASIC1.66□□□□□ -2.14
RHOP08100 AL596211.1-201ENST00000569873 2277 ntBASIC1.66□□□□□ -2.14
RHOP08100 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
RHOP08100 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.65□□□□□ -2.14
RHOP08100 MIR302D-201ENST00000362275 68 ntBASIC1.65□□□□□ -2.15
RHOP08100 Y_RNA.346-201ENST00000365385 112 ntBASIC1.65□□□□□ -2.15
RHOP08100 RNU6-1067P-201ENST00000384752 107 ntBASIC1.65□□□□□ -2.15
RHOP08100 SNORA67.6-201ENST00000391093 99 ntBASIC1.65□□□□□ -2.15
RHOP08100 AL451046.2-201ENST00000403074 277 ntBASIC1.65□□□□□ -2.15
RHOP08100 SNX2P2-201ENST00000424553 323 ntBASIC1.65□□□□□ -2.15
RHOP08100 AC009474.2-201ENST00000451383 136 ntBASIC1.65□□□□□ -2.15
RHOP08100 RNU2-11P-201ENST00000459191 187 ntBASIC1.65□□□□□ -2.15
RHOP08100 AL513534.2-201ENST00000603836 250 ntBASIC1.65□□□□□ -2.15
RHOP08100 MIR4791-201ENST00000607666 84 ntBASIC1.65□□□□□ -2.15
RHOP08100 AC025166.1-201ENST00000612411 163 ntBASIC1.65□□□□□ -2.15
RHOP08100 MIR8070-201ENST00000616510 88 ntBASIC1.65□□□□□ -2.15
RHOP08100 AC243994.1-201ENST00000618627 109 ntBASIC1.65□□□□□ -2.15
RHOP08100 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RHOP08100 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
RHOP08100 RNU6-1056P-201ENST00000383996 107 ntBASIC1.64□□□□□ -2.15
RHOP08100 RNU6-1144P-201ENST00000384247 104 ntBASIC1.64□□□□□ -2.15
RHOP08100 RNU6-476P-201ENST00000384726 107 ntBASIC1.64□□□□□ -2.15
RHOP08100 SNORD41-201ENST00000386967 70 ntBASIC1.64□□□□□ -2.15
RHOP08100 RNU6-1064P-201ENST00000410626 104 ntBASIC1.64□□□□□ -2.15
RHOP08100 COX6CP6-201ENST00000490840 228 ntBASIC1.64□□□□□ -2.15
RHOP08100 SNORD33.1-201ENST00000516213 88 ntBASIC1.64□□□□□ -2.15
RHOP08100 MIR4764-201ENST00000580680 88 ntBASIC1.64□□□□□ -2.15
RHOP08100 BX248123.2-201ENST00000606318 124 ntBASIC1.64□□□□□ -2.15
RHOP08100 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.64□□□□□ -2.15
RHOP08100 AC008133.2-201ENST00000624540 351 ntBASIC1.64□□□□□ -2.15
RHOP08100 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 245 ms