Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 AC108729.3-201ENST00000513484 108 ntBASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 SNORA31.4-201ENST00000516049 129 ntBASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 RNA5SP168-201ENST00000516642 112 ntBASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 SNORA31.15-201ENST00000516771 132 ntBASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 IGLV3-17-201ENST00000519099 244 ntBASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 MIR4498-201ENST00000577599 66 ntBASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 MIR4529-201ENST00000578110 78 ntBASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 AL162726.3-218ENST00000636401 95 ntBASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 RNU1-51P-201ENST00000365345 176 ntBASIC2.43□□□□□ -2.02
PCDHA11Q9Y5I1 Y_RNA.494-201ENST00000384432 111 ntBASIC2.43□□□□□ -2.02
PCDHA11Q9Y5I1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PCDHA11Q9Y5I1 SNORA19.1-201ENST00000410656 129 ntBASIC2.43□□□□□ -2.02
PCDHA11Q9Y5I1 RNA5SP144-201ENST00000410846 116 ntBASIC2.43□□□□□ -2.02
PCDHA11Q9Y5I1 RNU6-970P-201ENST00000516312 107 ntBASIC2.43□□□□□ -2.02
PCDHA11Q9Y5I1 RNU7-193P-201ENST00000516723 65 ntBASIC2.43□□□□□ -2.02
PCDHA11Q9Y5I1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.43□□□□□ -2.02
PCDHA11Q9Y5I1 FO624990.1-201ENST00000636373 85 ntBASIC2.43□□□□□ -2.02
PCDHA11Q9Y5I1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.42□□□□□ -2.02
PCDHA11Q9Y5I1 RNU6-1131P-201ENST00000364955 107 ntBASIC2.42□□□□□ -2.02
PCDHA11Q9Y5I1 RNU6-294P-201ENST00000364999 102 ntBASIC2.42□□□□□ -2.02
PCDHA11Q9Y5I1 MIR221-201ENST00000385135 110 ntBASIC2.42□□□□□ -2.02
PCDHA11Q9Y5I1 MIR524-201ENST00000385242 87 ntBASIC2.42□□□□□ -2.02
PCDHA11Q9Y5I1 MIR1267-201ENST00000408723 78 ntBASIC2.42□□□□□ -2.02
PCDHA11Q9Y5I1 RNU6-1053P-201ENST00000515930 101 ntBASIC2.42□□□□□ -2.02
PCDHA11Q9Y5I1 RNU6-904P-201ENST00000516206 101 ntBASIC2.42□□□□□ -2.02
PCDHA11Q9Y5I1 RNU6-158P-201ENST00000517104 100 ntBASIC2.42□□□□□ -2.02
PCDHA11Q9Y5I1 RNU7-181P-201ENST00000517234 74 ntBASIC2.42□□□□□ -2.02
PCDHA11Q9Y5I1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.42□□□□□ -2.02
PCDHA11Q9Y5I1 AC021613.1-201ENST00000623880 111 ntBASIC2.42□□□□□ -2.02
PCDHA11Q9Y5I1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PCDHA11Q9Y5I1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
PCDHA11Q9Y5I1 MIR302B-201ENST00000362188 73 ntBASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 RNA5SP393-201ENST00000363423 117 ntBASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 SNORA4.2-201ENST00000365313 147 ntBASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 RNU6-1031P-201ENST00000384773 107 ntBASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 SNORA48.1-201ENST00000390879 135 ntBASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 MIR1912-201ENST00000410389 80 ntBASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 RNU6-109P-201ENST00000516364 107 ntBASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 RNU6-184P-201ENST00000516514 107 ntBASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 RNU7-6P-201ENST00000516845 62 ntBASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 AC141557.1-201ENST00000540982 400 ntBASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 MIR5194-201ENST00000582634 120 ntBASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 U1.36-201ENST00000620684 176 ntBASIC2.41□□□□□ -2.02
PCDHA11Q9Y5I1 RNU1-17P-201ENST00000363022 152 ntBASIC2.4□□□□□ -2.03
PCDHA11Q9Y5I1 RNU6-49P-201ENST00000384256 107 ntBASIC2.4□□□□□ -2.03
PCDHA11Q9Y5I1 MIR452-201ENST00000385020 85 ntBASIC2.4□□□□□ -2.03
PCDHA11Q9Y5I1 AL023284.1-201ENST00000403956 276 ntBASIC2.4□□□□□ -2.03
PCDHA11Q9Y5I1 AL022718.1-201ENST00000412004 84 ntBASIC2.4□□□□□ -2.03
PCDHA11Q9Y5I1 RPL39P25-201ENST00000449384 154 ntBASIC2.4□□□□□ -2.03
PCDHA11Q9Y5I1 RNU2-11P-201ENST00000459191 187 ntBASIC2.4□□□□□ -2.03
PCDHA11Q9Y5I1 RPS23P4-201ENST00000487908 423 ntBASIC2.4□□□□□ -2.03
PCDHA11Q9Y5I1 RNU7-12P-201ENST00000516030 62 ntBASIC2.4□□□□□ -2.03
PCDHA11Q9Y5I1 RNVU1-2-201ENST00000516326 135 ntBASIC2.4□□□□□ -2.03
PCDHA11Q9Y5I1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.39□□□□□ -2.03
PCDHA11Q9Y5I1 SNORD73B-201ENST00000364394 72 ntBASIC2.39□□□□□ -2.03
PCDHA11Q9Y5I1 SNORA67.1-201ENST00000364749 141 ntBASIC2.39□□□□□ -2.03
PCDHA11Q9Y5I1 SNORA1.2-201ENST00000365189 134 ntBASIC2.39□□□□□ -2.03
PCDHA11Q9Y5I1 RNU6-816P-201ENST00000390914 107 ntBASIC2.39□□□□□ -2.03
PCDHA11Q9Y5I1 RNU6-1268P-201ENST00000391214 107 ntBASIC2.39□□□□□ -2.03
PCDHA11Q9Y5I1 RNU6-1239P-201ENST00000391310 107 ntBASIC2.39□□□□□ -2.03
PCDHA11Q9Y5I1 MIR1287-201ENST00000408492 90 ntBASIC2.39□□□□□ -2.03
PCDHA11Q9Y5I1 AC004812.1-201ENST00000540773 146 ntBASIC2.39□□□□□ -2.03
PCDHA11Q9Y5I1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDHA11Q9Y5I1 ZNF355P-201ENST00000427301 3216 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 RNU6-661P-201ENST00000362409 107 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 MIR488-201ENST00000365739 83 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 RNU1-138P-201ENST00000384093 164 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 Y_RNA.531-201ENST00000384589 121 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 MIR520A-201ENST00000384862 85 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 SNORD23.1-201ENST00000408212 104 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 RNA5SP450-201ENST00000411206 102 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 POLR2J4-204ENST00000418424 324 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 AL512326.2-201ENST00000426359 151 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 AC107297.1-201ENST00000459991 176 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 RNA5SP200-201ENST00000516360 103 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 AL049779.4-201ENST00000604500 156 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 AC087741.2-201ENST00000619415 172 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 MIR6132-201ENST00000622083 109 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 MIR6766-201ENST00000622641 72 ntBASIC2.38□□□□□ -2.03
PCDHA11Q9Y5I1 Y_RNA.558-201ENST00000384685 113 ntBASIC2.37□□□□□ -2.03
PCDHA11Q9Y5I1 MIR516B2-201ENST00000385190 85 ntBASIC2.37□□□□□ -2.03
PCDHA11Q9Y5I1 RNA5SP501-201ENST00000410990 112 ntBASIC2.37□□□□□ -2.03
PCDHA11Q9Y5I1 MTATP8P2-201ENST00000435212 202 ntBASIC2.37□□□□□ -2.03
PCDHA11Q9Y5I1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.37□□□□□ -2.03
PCDHA11Q9Y5I1 RNA5SP437-201ENST00000517249 129 ntBASIC2.37□□□□□ -2.03
PCDHA11Q9Y5I1 RNU2-19P-201ENST00000517288 84 ntBASIC2.37□□□□□ -2.03
PCDHA11Q9Y5I1 SUB1P4-201ENST00000566062 339 ntBASIC2.37□□□□□ -2.03
PCDHA11Q9Y5I1 MIR6845-201ENST00000613182 61 ntBASIC2.37□□□□□ -2.03
PCDHA11Q9Y5I1 AC095038.3-201ENST00000634439 195 ntBASIC2.37□□□□□ -2.03
PCDHA11Q9Y5I1 MIR2052-201ENST00000636055 55 ntBASIC2.37□□□□□ -2.03
PCDHA11Q9Y5I1 SNORD115-19-201ENST00000363098 82 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms