Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RNA5SP247-201ENST00000411181 105 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 RPS27P16-201ENST00000425758 201 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 MTATP6P21-201ENST00000440681 189 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 RPS29P29-201ENST00000456396 171 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 RPS29P24-201ENST00000486345 171 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 AL133373.1-201ENST00000497098 94 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 RNU2-13P-201ENST00000515909 113 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 SNORD36C-201ENST00000516733 66 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 AC090821.2-201ENST00000523552 176 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 MIR502-201ENST00000606349 86 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 AC243994.1-201ENST00000618627 109 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 Y_RNA.8-201ENST00000362353 102 ntBASIC1.68□□□□□ -2.14
PCDHGA3Q9Y5H0 Y_RNA.400-201ENST00000383963 111 ntBASIC1.68□□□□□ -2.14
PCDHGA3Q9Y5H0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.68□□□□□ -2.14
PCDHGA3Q9Y5H0 RNU7-67P-201ENST00000459003 62 ntBASIC1.68□□□□□ -2.14
PCDHGA3Q9Y5H0 RNU6-947P-201ENST00000516264 106 ntBASIC1.68□□□□□ -2.14
PCDHGA3Q9Y5H0 RN7SKP88-201ENST00000516847 250 ntBASIC1.68□□□□□ -2.14
PCDHGA3Q9Y5H0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.68□□□□□ -2.14
PCDHGA3Q9Y5H0 AC112693.2-201ENST00000556538 232 ntBASIC1.68□□□□□ -2.14
PCDHGA3Q9Y5H0 MIR4791-201ENST00000607666 84 ntBASIC1.68□□□□□ -2.14
PCDHGA3Q9Y5H0 7SK.8-201ENST00000612110 250 ntBASIC1.68□□□□□ -2.14
PCDHGA3Q9Y5H0 7SK.11-201ENST00000615477 250 ntBASIC1.68□□□□□ -2.14
PCDHGA3Q9Y5H0 7SK.13-201ENST00000622040 250 ntBASIC1.68□□□□□ -2.14
PCDHGA3Q9Y5H0 Y_RNA.164-201ENST00000363709 102 ntBASIC1.67□□□□□ -2.14
PCDHGA3Q9Y5H0 SNORA16.1-201ENST00000364597 132 ntBASIC1.67□□□□□ -2.14
PCDHGA3Q9Y5H0 SNORD18B-201ENST00000365659 72 ntBASIC1.67□□□□□ -2.14
PCDHGA3Q9Y5H0 Y_RNA.398-201ENST00000383952 99 ntBASIC1.67□□□□□ -2.14
PCDHGA3Q9Y5H0 SNORA24-201ENST00000384096 131 ntBASIC1.67□□□□□ -2.14
PCDHGA3Q9Y5H0 RNU6-997P-201ENST00000384725 107 ntBASIC1.67□□□□□ -2.14
PCDHGA3Q9Y5H0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.67□□□□□ -2.14
PCDHGA3Q9Y5H0 SNORD28B-201ENST00000390993 75 ntBASIC1.67□□□□□ -2.14
PCDHGA3Q9Y5H0 BTF3P4-201ENST00000418852 495 ntBASIC1.67□□□□□ -2.14
PCDHGA3Q9Y5H0 AL035398.1-201ENST00000430869 322 ntBASIC1.67□□□□□ -2.14
PCDHGA3Q9Y5H0 snoU13.16-201ENST00000459350 104 ntBASIC1.67□□□□□ -2.14
PCDHGA3Q9Y5H0 MIR8065-201ENST00000620577 100 ntBASIC1.67□□□□□ -2.14
PCDHGA3Q9Y5H0 RNU4-11P-201ENST00000365287 132 ntBASIC1.66□□□□□ -2.14
PCDHGA3Q9Y5H0 Y_RNA.351-201ENST00000365436 96 ntBASIC1.66□□□□□ -2.14
PCDHGA3Q9Y5H0 RNY1P5-201ENST00000383890 115 ntBASIC1.66□□□□□ -2.14
PCDHGA3Q9Y5H0 Y_RNA.584-201ENST00000391090 114 ntBASIC1.66□□□□□ -2.14
PCDHGA3Q9Y5H0 RNU6-588P-201ENST00000410281 105 ntBASIC1.66□□□□□ -2.14
PCDHGA3Q9Y5H0 MIR8081-201ENST00000611533 95 ntBASIC1.66□□□□□ -2.14
PCDHGA3Q9Y5H0 MIR4251-201ENST00000635819 61 ntBASIC1.66□□□□□ -2.14
PCDHGA3Q9Y5H0 MIR302B-201ENST00000362188 73 ntBASIC1.65□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU6-1082P-201ENST00000364574 107 ntBASIC1.65□□□□□ -2.15
PCDHGA3Q9Y5H0 RNA5SP261-201ENST00000410536 106 ntBASIC1.65□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.65□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU6-998P-201ENST00000515894 101 ntBASIC1.65□□□□□ -2.15
PCDHGA3Q9Y5H0 MIR4419B-201ENST00000577260 68 ntBASIC1.65□□□□□ -2.15
PCDHGA3Q9Y5H0 MIR548X2-201ENST00000579776 100 ntBASIC1.65□□□□□ -2.15
PCDHGA3Q9Y5H0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.65□□□□□ -2.15
PCDHGA3Q9Y5H0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.65□□□□□ -2.15
PCDHGA3Q9Y5H0 AC021753.1-201ENST00000635724 168 ntBASIC1.65□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU6-1130P-201ENST00000365434 107 ntBASIC1.64□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU4-62P-201ENST00000410125 130 ntBASIC1.64□□□□□ -2.15
PCDHGA3Q9Y5H0 AP1B1P2-201ENST00000416196 106 ntBASIC1.64□□□□□ -2.15
PCDHGA3Q9Y5H0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.64□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU7-73P-201ENST00000458743 63 ntBASIC1.64□□□□□ -2.15
PCDHGA3Q9Y5H0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.64□□□□□ -2.15
PCDHGA3Q9Y5H0 MIR3658-201ENST00000636291 56 ntBASIC1.64□□□□□ -2.15
PCDHGA3Q9Y5H0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU6-321P-201ENST00000410912 106 ntBASIC1.63□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU7-200P-201ENST00000516105 62 ntBASIC1.63□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU6-958P-201ENST00000516995 106 ntBASIC1.63□□□□□ -2.15
PCDHGA3Q9Y5H0 MIR4781-201ENST00000585250 76 ntBASIC1.63□□□□□ -2.15
PCDHGA3Q9Y5H0 AL096861.1-201ENST00000610899 123 ntBASIC1.63□□□□□ -2.15
PCDHGA3Q9Y5H0 Y_RNA.170-201ENST00000363746 110 ntBASIC1.62□□□□□ -2.15
PCDHGA3Q9Y5H0 Y_RNA.215-201ENST00000364204 112 ntBASIC1.62□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU1-133P-201ENST00000364867 167 ntBASIC1.62□□□□□ -2.15
PCDHGA3Q9Y5H0 Y_RNA.343-201ENST00000365354 112 ntBASIC1.62□□□□□ -2.15
PCDHGA3Q9Y5H0 Y_RNA.488-201ENST00000384403 102 ntBASIC1.62□□□□□ -2.15
PCDHGA3Q9Y5H0 Y_RNA.497-201ENST00000384447 98 ntBASIC1.62□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU7-41P-201ENST00000515917 61 ntBASIC1.62□□□□□ -2.15
PCDHGA3Q9Y5H0 SNORA31.4-201ENST00000516049 129 ntBASIC1.62□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU6-1149P-201ENST00000516810 97 ntBASIC1.62□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU11-2P-201ENST00000516898 142 ntBASIC1.62□□□□□ -2.15
PCDHGA3Q9Y5H0 AP001485.1-201ENST00000604799 199 ntBASIC1.62□□□□□ -2.15
PCDHGA3Q9Y5H0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.62□□□□□ -2.15
PCDHGA3Q9Y5H0 MIR337-201ENST00000362281 93 ntBASIC1.61□□□□□ -2.15
PCDHGA3Q9Y5H0 Y_RNA.52-201ENST00000362760 96 ntBASIC1.61□□□□□ -2.15
PCDHGA3Q9Y5H0 RNY1P10-201ENST00000363268 113 ntBASIC1.61□□□□□ -2.15
PCDHGA3Q9Y5H0 Y_RNA.120-201ENST00000363304 110 ntBASIC1.61□□□□□ -2.15
PCDHGA3Q9Y5H0 Y_RNA.226-201ENST00000364337 114 ntBASIC1.61□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU1-98P-201ENST00000458992 160 ntBASIC1.61□□□□□ -2.15
PCDHGA3Q9Y5H0 SCARNA15-202ENST00000516881 127 ntBASIC1.61□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU6-165P-201ENST00000517170 99 ntBASIC1.61□□□□□ -2.15
PCDHGA3Q9Y5H0 DNAJC19P9-201ENST00000555084 351 ntBASIC1.61□□□□□ -2.15
PCDHGA3Q9Y5H0 CYP3A52P-201ENST00000563326 91 ntBASIC1.61□□□□□ -2.15
PCDHGA3Q9Y5H0 MIR3152-201ENST00000579801 74 ntBASIC1.61□□□□□ -2.15
PCDHGA3Q9Y5H0 MIR4303-201ENST00000581299 66 ntBASIC1.61□□□□□ -2.15
PCDHGA3Q9Y5H0 MIR3192-201ENST00000584920 77 ntBASIC1.61□□□□□ -2.15
PCDHGA3Q9Y5H0 AL359821.1-201ENST00000605519 182 ntBASIC1.61□□□□□ -2.15
PCDHGA3Q9Y5H0 Y_RNA.494-201ENST00000384432 111 ntBASIC1.6□□□□□ -2.15
PCDHGA3Q9Y5H0 RNU6-255P-201ENST00000516957 105 ntBASIC1.6□□□□□ -2.15
PCDHGA3Q9Y5H0 MIR3618-201ENST00000580330 88 ntBASIC1.6□□□□□ -2.15
PCDHGA3Q9Y5H0 AL512598.1-201ENST00000610158 273 ntBASIC1.6□□□□□ -2.15
PCDHGA3Q9Y5H0 MTND5P32-201ENST00000560711 1802 ntBASIC1.6□□□□□ -2.15
PCDHGA3Q9Y5H0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms