Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 Y_RNA.272-201ENST00000364696 102 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-15-201ENST00000364809 81 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-1-201ENST00000364961 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-26-201ENST00000365067 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-10-201ENST00000365073 81 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-43-201ENST00000365503 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 Y_RNA.370-201ENST00000365589 108 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-36-201ENST00000365629 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 MT-TR-201ENST00000387439 65 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 RNU2-13P-201ENST00000515909 113 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 RNU7-41P-201ENST00000515917 61 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 RNU6-947P-201ENST00000516264 106 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORA18.4-201ENST00000516440 124 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 RN7SKP88-201ENST00000516847 250 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 MIR3192-201ENST00000584920 77 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-40-201ENST00000606510 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 7SK.8-201ENST00000612110 250 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 7SK.11-201ENST00000615477 250 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.16□□□□□ -2.22
SIX2Q9NPC8 7SK.13-201ENST00000622040 250 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 AC008133.2-201ENST00000624540 351 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 MIR376A2-201ENST00000636782 80 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 Y_RNA.180-201ENST00000363867 113 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 SNORA25.7-201ENST00000364375 127 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 RNU6-53P-201ENST00000365367 106 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 RNU6-1292P-201ENST00000383856 107 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 RNU6-1189P-201ENST00000383958 107 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 Y_RNA.494-201ENST00000384432 111 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 MIR624-201ENST00000385217 97 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 SNORA40.5-201ENST00000391061 128 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 MIR548I3-201ENST00000408378 149 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 MIR548I1-201ENST00000408810 149 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 RNU6-394P-201ENST00000410735 107 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.15□□□□□ -2.23
SIX2Q9NPC8 RPL39P39-201ENST00000455840 151 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 RPS26P48-201ENST00000491713 339 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 CYP3A52P-201ENST00000563326 91 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.15□□□□□ -2.23
SIX2Q9NPC8 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
SIX2Q9NPC8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SIX2Q9NPC8 Y_RNA.440-201ENST00000384120 114 ntBASIC1.14□□□□□ -2.23
SIX2Q9NPC8 Y_RNA.537-201ENST00000384626 109 ntBASIC1.14□□□□□ -2.23
SIX2Q9NPC8 MIR570-201ENST00000384917 97 ntBASIC1.14□□□□□ -2.23
SIX2Q9NPC8 RNA5SP127-201ENST00000411051 133 ntBASIC1.14□□□□□ -2.23
SIX2Q9NPC8 MIR5197-201ENST00000583721 112 ntBASIC1.14□□□□□ -2.23
SIX2Q9NPC8 AP001485.1-201ENST00000604799 199 ntBASIC1.14□□□□□ -2.23
SIX2Q9NPC8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.14□□□□□ -2.23
SIX2Q9NPC8 RNA5SP48-201ENST00000363969 126 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 RNU6-1082P-201ENST00000364574 107 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 RNU6-1336P-201ENST00000383886 109 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 SNORA24-201ENST00000384096 131 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 SNORA27-201ENST00000384323 126 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 RNU6-1067P-201ENST00000384752 107 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 Y_RNA.580-201ENST00000391004 95 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.13□□□□□ -2.23
SIX2Q9NPC8 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 snoU13.25-201ENST00000458945 104 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 AC107297.1-201ENST00000459991 176 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 RNA5SP458-201ENST00000516188 119 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 MIR3646-201ENST00000578301 84 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 DNAJC19P2-201ENST00000593340 302 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 MIR4791-201ENST00000607666 84 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 AC104465.1-201ENST00000611365 139 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 MIR3658-201ENST00000636291 56 ntBASIC1.13□□□□□ -2.23
SIX2Q9NPC8 RNU6-209P-201ENST00000384118 107 ntBASIC1.12□□□□□ -2.23
SIX2Q9NPC8 RNU6-804P-201ENST00000384286 107 ntBASIC1.12□□□□□ -2.23
SIX2Q9NPC8 SNORA51.10-201ENST00000384418 136 ntBASIC1.12□□□□□ -2.23
SIX2Q9NPC8 SNORA75.5-201ENST00000391291 81 ntBASIC1.12□□□□□ -2.23
SIX2Q9NPC8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.12□□□□□ -2.23
SIX2Q9NPC8 RPS29P24-201ENST00000486345 171 ntBASIC1.12□□□□□ -2.23
SIX2Q9NPC8 MIR3144-201ENST00000579460 79 ntBASIC1.12□□□□□ -2.23
SIX2Q9NPC8 AC243994.1-201ENST00000618627 109 ntBASIC1.12□□□□□ -2.23
SIX2Q9NPC8 MIR6844-201ENST00000637122 62 ntBASIC1.12□□□□□ -2.23
SIX2Q9NPC8 RNU6-1130P-201ENST00000365434 107 ntBASIC1.11□□□□□ -2.23
SIX2Q9NPC8 Y_RNA.464-201ENST00000384282 110 ntBASIC1.11□□□□□ -2.23
SIX2Q9NPC8 RNU6-1054P-201ENST00000411293 104 ntBASIC1.11□□□□□ -2.23
SIX2Q9NPC8 AL603825.1-201ENST00000438481 80 ntBASIC1.11□□□□□ -2.23
SIX2Q9NPC8 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.11□□□□□ -2.23
SIX2Q9NPC8 MIR4251-201ENST00000635819 61 ntBASIC1.11□□□□□ -2.23
SIX2Q9NPC8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SIX2Q9NPC8 RNU6-449P-201ENST00000383914 107 ntBASIC1.1□□□□□ -2.23
SIX2Q9NPC8 SNORD116-18-201ENST00000383961 92 ntBASIC1.1□□□□□ -2.23
SIX2Q9NPC8 SNORA70.7-201ENST00000384159 133 ntBASIC1.1□□□□□ -2.23
SIX2Q9NPC8 AC245047.7-201ENST00000440265 293 ntBASIC1.1□□□□□ -2.23
SIX2Q9NPC8 AC048334.1-201ENST00000477975 159 ntBASIC1.1□□□□□ -2.23
SIX2Q9NPC8 AL133373.1-201ENST00000497098 94 ntBASIC1.1□□□□□ -2.23
SIX2Q9NPC8 RNU6-998P-201ENST00000515894 101 ntBASIC1.1□□□□□ -2.23
SIX2Q9NPC8 SNORA31.2-201ENST00000516019 134 ntBASIC1.1□□□□□ -2.23
SIX2Q9NPC8 SCARNA15-202ENST00000516881 127 ntBASIC1.1□□□□□ -2.23
SIX2Q9NPC8 RNU6-1212P-201ENST00000517023 104 ntBASIC1.1□□□□□ -2.23
SIX2Q9NPC8 MTND1P7-201ENST00000632801 297 ntBASIC1.1□□□□□ -2.23
SIX2Q9NPC8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
SIX2Q9NPC8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.09□□□□□ -2.23
SIX2Q9NPC8 Y_RNA.8-201ENST00000362353 102 ntBASIC1.09□□□□□ -2.23
SIX2Q9NPC8 RNU6-818P-201ENST00000364837 108 ntBASIC1.09□□□□□ -2.23
SIX2Q9NPC8 Y_RNA.398-201ENST00000383952 99 ntBASIC1.09□□□□□ -2.23
SIX2Q9NPC8 RNU6-588P-201ENST00000410281 105 ntBASIC1.09□□□□□ -2.23
SIX2Q9NPC8 RNU7-67P-201ENST00000459003 62 ntBASIC1.09□□□□□ -2.23
SIX2Q9NPC8 RNU7-96P-201ENST00000459535 64 ntBASIC1.09□□□□□ -2.23
SIX2Q9NPC8 AP003716.2-201ENST00000528260 108 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms