Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6-396P-201ENST00000365369 105 ntBASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 SNORA56-201ENST00000383966 129 ntBASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 Y_RNA.491-201ENST00000384417 107 ntBASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 ATP5A1P2-201ENST00000412323 255 ntBASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 AC244023.1-201ENST00000426884 112 ntBASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 AC015818.7-201ENST00000428754 109 ntBASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR5047-201ENST00000579212 100 ntBASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR4484-201ENST00000582855 83 ntBASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 AC242498.1-201ENST00000604134 111 ntBASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 AC067747.1-201ENST00000608026 250 ntBASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP3-1Q9BYR8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6-208P-201ENST00000362431 107 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 SNORD36A-201ENST00000362874 73 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 RNA5SP259-201ENST00000365541 109 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6-203P-201ENST00000384038 104 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR516A2-201ENST00000384888 90 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR516A1-201ENST00000385033 90 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 MT-TF-201ENST00000387314 71 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6-1165P-201ENST00000410119 107 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 AC004965.1-201ENST00000413033 213 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 AC245517.4-201ENST00000448601 281 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 AC115115.1-201ENST00000449927 248 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6-634P-201ENST00000459134 106 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 AC005908.1-201ENST00000468701 347 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 IGKV2-26-201ENST00000518305 343 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 AC245166.1-201ENST00000521012 253 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 PARP1P2-201ENST00000556806 195 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 UBL5P2-201ENST00000583788 219 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR4658-201ENST00000584344 65 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR6740-201ENST00000618268 113 ntBASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
KRTAP3-1Q9BYR8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 Y_RNA.532-201ENST00000384590 113 ntBASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 SNORD17-201ENST00000390930 237 ntBASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 RNA5SP229-201ENST00000410809 99 ntBASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 AL035423.1-201ENST00000420331 213 ntBASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 CYCSP4-201ENST00000429682 331 ntBASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 AL139132.1-201ENST00000431587 344 ntBASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 RPS29P7-201ENST00000439662 171 ntBASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 SNORA59A-201ENST00000459326 152 ntBASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6-303P-201ENST00000517091 106 ntBASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 GTF3AP2-201ENST00000557014 266 ntBASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR5685-201ENST00000579080 79 ntBASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 PRELID3BP2-201ENST00000605362 201 ntBASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR6820-201ENST00000611508 62 ntBASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 uc_338.1-201ENST00000612113 180 ntBASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP3-1Q9BYR8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR30D-201ENST00000362283 70 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6-132P-201ENST00000383863 107 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6-649P-201ENST00000384463 107 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR194-1-201ENST00000384892 85 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR513A1-201ENST00000385138 129 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 MT-TN-201ENST00000387400 73 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 RNA5SP450-201ENST00000411206 102 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU7-62P-201ENST00000458856 62 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 RN7SL75P-201ENST00000461926 281 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6-75P-201ENST00000515944 104 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 RNA5SP217-201ENST00000515959 91 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR2115-201ENST00000516657 100 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR4529-201ENST00000578110 78 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR4286-201ENST00000580651 93 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 U3.45-201ENST00000607547 219 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 ZYXP1-201ENST00000617638 118 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 AL161722.3-201ENST00000605789 2983 ntBASIC1.67□□□□□ -2.14
KRTAP3-1Q9BYR8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP3-1Q9BYR8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms