Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 MTATP6P21-201ENST00000440681 189 ntBASIC1.47□□□□□ -2.17
PKP4Q99569 AC008267.6-201ENST00000441664 139 ntBASIC1.47□□□□□ -2.17
PKP4Q99569 AC087499.4-201ENST00000448505 178 ntBASIC1.47□□□□□ -2.17
PKP4Q99569 Y_RNA.690-201ENST00000516603 95 ntBASIC1.47□□□□□ -2.17
PKP4Q99569 RNU2-60P-201ENST00000517290 128 ntBASIC1.47□□□□□ -2.17
PKP4Q99569 SNORD53B-201ENST00000577887 78 ntBASIC1.47□□□□□ -2.17
PKP4Q99569 MIR5197-201ENST00000583721 112 ntBASIC1.47□□□□□ -2.17
PKP4Q99569 AC095038.3-201ENST00000634439 195 ntBASIC1.47□□□□□ -2.17
PKP4Q99569 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
PKP4Q99569 MTND5P32-201ENST00000560711 1802 ntBASIC1.47□□□□□ -2.17
PKP4Q99569 AL442644.1-201ENST00000454390 3105 ntBASIC1.46□□□□□ -2.17
PKP4Q99569 Y_RNA.71-201ENST00000362892 104 ntBASIC1.46□□□□□ -2.18
PKP4Q99569 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
PKP4Q99569 Y_RNA.218-201ENST00000364218 104 ntBASIC1.46□□□□□ -2.18
PKP4Q99569 RNU6-60P-201ENST00000364792 103 ntBASIC1.46□□□□□ -2.18
PKP4Q99569 RNU6-80P-201ENST00000384195 107 ntBASIC1.46□□□□□ -2.18
PKP4Q99569 RNU6-1168P-201ENST00000390831 104 ntBASIC1.46□□□□□ -2.18
PKP4Q99569 AC023790.1-201ENST00000482174 347 ntBASIC1.46□□□□□ -2.18
PKP4Q99569 RNU6-313P-201ENST00000516317 112 ntBASIC1.46□□□□□ -2.18
PKP4Q99569 MIR3121-201ENST00000579680 77 ntBASIC1.46□□□□□ -2.18
PKP4Q99569 AL645939.4-201ENST00000604495 135 ntBASIC1.46□□□□□ -2.18
PKP4Q99569 AL365222.1-201ENST00000614661 98 ntBASIC1.46□□□□□ -2.18
PKP4Q99569 SNORD3E-202ENST00000627253 216 ntBASIC1.46□□□□□ -2.18
PKP4Q99569 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.45□□□□□ -2.18
PKP4Q99569 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.45□□□□□ -2.18
PKP4Q99569 RNU6-1123P-201ENST00000362347 106 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 Y_RNA.127-201ENST00000363386 109 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 SNORD116-14-201ENST00000383894 92 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 SNORD116-17-201ENST00000383929 92 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 SNORD26-201ENST00000384147 75 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 SNORD116-15-201ENST00000384445 92 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 SNORD116-19-201ENST00000384729 92 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 RNU6-1154P-201ENST00000391001 104 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 RPS27P16-201ENST00000425758 201 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 AC093850.1-201ENST00000454121 251 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 AC108729.3-201ENST00000513484 108 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 RNU4-57P-201ENST00000515980 135 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 RNA5SP236-201ENST00000516169 116 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 RNU6-1149P-201ENST00000516810 97 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 AP003484.1-201ENST00000530974 250 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 MIR4303-201ENST00000581299 66 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 MIR376A2-201ENST00000636782 80 ntBASIC1.45□□□□□ -2.18
PKP4Q99569 RNU6-457P-201ENST00000363999 107 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 RNU6-309P-201ENST00000364573 106 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 Y_RNA.294-201ENST00000364916 102 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 SNORA2.2-201ENST00000365473 135 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 RNU6-1065P-201ENST00000384513 106 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 MIR136-201ENST00000385207 82 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 SNORA17.3-201ENST00000391159 129 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 RNU6-938P-201ENST00000411285 103 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.44□□□□□ -2.18
PKP4Q99569 AL354695.1-201ENST00000427935 228 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.44□□□□□ -2.18
PKP4Q99569 RNU6-1333P-201ENST00000516162 93 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 SNORD36C-201ENST00000516733 66 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 RNU6-1234P-201ENST00000516877 103 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 SCARNA15-202ENST00000516881 127 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 MIR4778-201ENST00000577635 80 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.44□□□□□ -2.18
PKP4Q99569 Y_RNA.280-201ENST00000364765 112 ntBASIC1.43□□□□□ -2.18
PKP4Q99569 Y_RNA.338-201ENST00000365320 114 ntBASIC1.43□□□□□ -2.18
PKP4Q99569 RNU6-203P-201ENST00000384038 104 ntBASIC1.43□□□□□ -2.18
PKP4Q99569 Y_RNA.440-201ENST00000384120 114 ntBASIC1.43□□□□□ -2.18
PKP4Q99569 SNORA22C-201ENST00000384614 134 ntBASIC1.43□□□□□ -2.18
PKP4Q99569 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
PKP4Q99569 AC004965.1-201ENST00000413033 213 ntBASIC1.43□□□□□ -2.18
PKP4Q99569 AC108667.1-201ENST00000428618 249 ntBASIC1.43□□□□□ -2.18
PKP4Q99569 AL158147.1-201ENST00000443970 75 ntBASIC1.43□□□□□ -2.18
PKP4Q99569 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
PKP4Q99569 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.43□□□□□ -2.18
PKP4Q99569 AL022345.2-201ENST00000606307 135 ntBASIC1.43□□□□□ -2.18
PKP4Q99569 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.43□□□□□ -2.18
PKP4Q99569 AP000648.3-201ENST00000623539 4507 ntBASIC1.43□□□□□ -2.18
PKP4Q99569 MIR378A-201ENST00000362177 66 ntBASIC1.42□□□□□ -2.18
PKP4Q99569 Y_RNA.114-201ENST00000363265 113 ntBASIC1.42□□□□□ -2.18
PKP4Q99569 RNU6-647P-201ENST00000364243 107 ntBASIC1.42□□□□□ -2.18
PKP4Q99569 MIR516B2-201ENST00000385190 85 ntBASIC1.42□□□□□ -2.18
PKP4Q99569 SNORA40.5-201ENST00000391061 128 ntBASIC1.42□□□□□ -2.18
PKP4Q99569 Y_RNA.651-201ENST00000459380 103 ntBASIC1.42□□□□□ -2.18
PKP4Q99569 RPL30P7-201ENST00000479312 323 ntBASIC1.42□□□□□ -2.18
PKP4Q99569 RNU5E-3P-201ENST00000515913 68 ntBASIC1.42□□□□□ -2.18
PKP4Q99569 RN7SKP179-201ENST00000516126 217 ntBASIC1.42□□□□□ -2.18
PKP4Q99569 RNU6-113P-201ENST00000516653 101 ntBASIC1.42□□□□□ -2.18
PKP4Q99569 SNORA18.7-201ENST00000516910 131 ntBASIC1.42□□□□□ -2.18
PKP4Q99569 AC090049.2-201ENST00000550377 109 ntBASIC1.42□□□□□ -2.18
PKP4Q99569 MIR3937-201ENST00000580135 106 ntBASIC1.42□□□□□ -2.18
PKP4Q99569 RNU6-508P-201ENST00000363231 103 ntBASIC1.41□□□□□ -2.18
PKP4Q99569 Y_RNA.241-201ENST00000364470 117 ntBASIC1.41□□□□□ -2.18
PKP4Q99569 Y_RNA.261-201ENST00000364631 102 ntBASIC1.41□□□□□ -2.18
PKP4Q99569 RNA5SP205-201ENST00000364653 136 ntBASIC1.41□□□□□ -2.18
PKP4Q99569 SNORA1.2-201ENST00000365189 134 ntBASIC1.41□□□□□ -2.18
PKP4Q99569 MIR526A1-201ENST00000384897 85 ntBASIC1.41□□□□□ -2.18
PKP4Q99569 U8.17-201ENST00000391292 132 ntBASIC1.41□□□□□ -2.18
PKP4Q99569 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.41□□□□□ -2.18
PKP4Q99569 RNU7-80P-201ENST00000459562 61 ntBASIC1.41□□□□□ -2.18
PKP4Q99569 RNU6-659P-201ENST00000516454 104 ntBASIC1.41□□□□□ -2.18
PKP4Q99569 RNU7-70P-201ENST00000516941 66 ntBASIC1.41□□□□□ -2.18
PKP4Q99569 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 340.3 ms