Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.24□□□□□ -2.37
CCDC43Q96MW1 Y_RNA.587-201ENST00000391210 103 ntBASIC0.24□□□□□ -2.37
CCDC43Q96MW1 RNU2-70P-201ENST00000410718 179 ntBASIC0.24□□□□□ -2.37
CCDC43Q96MW1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC43Q96MW1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC43Q96MW1 Y_RNA.639-201ENST00000458981 102 ntBASIC0.24□□□□□ -2.37
CCDC43Q96MW1 RPS29P24-201ENST00000486345 171 ntBASIC0.24□□□□□ -2.37
CCDC43Q96MW1 RNA5SP94-201ENST00000516917 108 ntBASIC0.24□□□□□ -2.37
CCDC43Q96MW1 Y_RNA.715-201ENST00000517082 110 ntBASIC0.24□□□□□ -2.37
CCDC43Q96MW1 MIR1273G-201ENST00000577677 100 ntBASIC0.24□□□□□ -2.37
CCDC43Q96MW1 MIR4662B-201ENST00000579498 81 ntBASIC0.24□□□□□ -2.37
CCDC43Q96MW1 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.24□□□□□ -2.37
CCDC43Q96MW1 SNORA1.1-201ENST00000364671 133 ntBASIC0.23□□□□□ -2.37
CCDC43Q96MW1 MIR1257-201ENST00000408490 117 ntBASIC0.23□□□□□ -2.37
CCDC43Q96MW1 RNU6-602P-201ENST00000411155 105 ntBASIC0.23□□□□□ -2.37
CCDC43Q96MW1 SNORD71-201ENST00000411292 86 ntBASIC0.23□□□□□ -2.37
CCDC43Q96MW1 SNRPGP12-201ENST00000449481 213 ntBASIC0.23□□□□□ -2.37
CCDC43Q96MW1 snoU13.2-201ENST00000459201 104 ntBASIC0.23□□□□□ -2.37
CCDC43Q96MW1 SNORD36C-201ENST00000516733 66 ntBASIC0.23□□□□□ -2.37
CCDC43Q96MW1 RNU6-897P-201ENST00000517135 105 ntBASIC0.23□□□□□ -2.37
CCDC43Q96MW1 SNORA25.18-201ENST00000607153 114 ntBASIC0.23□□□□□ -2.37
CCDC43Q96MW1 uc_338.22-201ENST00000622722 187 ntBASIC0.23□□□□□ -2.37
CCDC43Q96MW1 MIR924-201ENST00000638017 53 ntBASIC0.23□□□□□ -2.37
CCDC43Q96MW1 MTCO2P24-201ENST00000515611 426 ntBASIC0.22□□□□□ -2.37
CCDC43Q96MW1 AC100767.1-201ENST00000528178 123 ntBASIC0.22□□□□□ -2.37
CCDC43Q96MW1 SNORD92-201ENST00000585078 85 ntBASIC0.22□□□□□ -2.37
CCDC43Q96MW1 AC090574.1-201ENST00000623186 233 ntBASIC0.22□□□□□ -2.37
CCDC43Q96MW1 RNU6-1272P-201ENST00000362776 107 ntBASIC0.21□□□□□ -2.38
CCDC43Q96MW1 SNORA63.7-201ENST00000365579 123 ntBASIC0.21□□□□□ -2.38
CCDC43Q96MW1 SNORD61-201ENST00000384252 73 ntBASIC0.21□□□□□ -2.38
CCDC43Q96MW1 MIR548A2-201ENST00000384956 97 ntBASIC0.21□□□□□ -2.38
CCDC43Q96MW1 SNORD12C-201ENST00000386307 89 ntBASIC0.21□□□□□ -2.38
CCDC43Q96MW1 PMCHL1-202ENST00000423102 261 ntBASIC0.21□□□□□ -2.38
CCDC43Q96MW1 MTND4P19-201ENST00000446659 478 ntBASIC0.21□□□□□ -2.38
CCDC43Q96MW1 AL138752.1-201ENST00000452964 351 ntBASIC0.21□□□□□ -2.38
CCDC43Q96MW1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.21□□□□□ -2.38
CCDC43Q96MW1 MIR3678-201ENST00000578455 94 ntBASIC0.21□□□□□ -2.38
CCDC43Q96MW1 MIR4514-201ENST00000581410 57 ntBASIC0.21□□□□□ -2.38
CCDC43Q96MW1 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
CCDC43Q96MW1 RNA5SP117-201ENST00000365294 118 ntBASIC0.2□□□□□ -2.38
CCDC43Q96MW1 RNU6-1190P-201ENST00000410811 104 ntBASIC0.2□□□□□ -2.38
CCDC43Q96MW1 RNU2-31P-201ENST00000516954 155 ntBASIC0.2□□□□□ -2.38
CCDC43Q96MW1 RNU6-365P-201ENST00000517113 106 ntBASIC0.2□□□□□ -2.38
CCDC43Q96MW1 RNU6-1270P-201ENST00000517128 108 ntBASIC0.2□□□□□ -2.38
CCDC43Q96MW1 MIR4795-201ENST00000584182 89 ntBASIC0.2□□□□□ -2.38
CCDC43Q96MW1 RAC1P9-201ENST00000604990 392 ntBASIC0.2□□□□□ -2.38
CCDC43Q96MW1 MIR330-201ENST00000362196 94 ntBASIC0.19□□□□□ -2.38
CCDC43Q96MW1 RNU6-349P-201ENST00000362402 107 ntBASIC0.19□□□□□ -2.38
CCDC43Q96MW1 SNORD24-201ENST00000383884 75 ntBASIC0.19□□□□□ -2.38
CCDC43Q96MW1 RNU6-662P-201ENST00000384253 104 ntBASIC0.19□□□□□ -2.38
CCDC43Q96MW1 Y_RNA.645-201ENST00000391229 102 ntBASIC0.19□□□□□ -2.38
CCDC43Q96MW1 uc_338.16-201ENST00000621804 95 ntBASIC0.19□□□□□ -2.38
CCDC43Q96MW1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.18□□□□□ -2.38
CCDC43Q96MW1 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
CCDC43Q96MW1 RNU4-10P-201ENST00000364383 140 ntBASIC0.18□□□□□ -2.38
CCDC43Q96MW1 RNU6-450P-201ENST00000364654 107 ntBASIC0.18□□□□□ -2.38
CCDC43Q96MW1 Y_RNA.394-201ENST00000383942 103 ntBASIC0.18□□□□□ -2.38
CCDC43Q96MW1 MIR563-201ENST00000385080 79 ntBASIC0.18□□□□□ -2.38
CCDC43Q96MW1 Y_RNA.581-201ENST00000391017 97 ntBASIC0.18□□□□□ -2.38
CCDC43Q96MW1 MTND5P20-201ENST00000448677 143 ntBASIC0.18□□□□□ -2.38
CCDC43Q96MW1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.18□□□□□ -2.38
CCDC43Q96MW1 AC023932.2-201ENST00000603176 175 ntBASIC0.18□□□□□ -2.38
CCDC43Q96MW1 MIR30D-201ENST00000362283 70 ntBASIC0.17□□□□□ -2.38
CCDC43Q96MW1 Y_RNA.7-201ENST00000362352 102 ntBASIC0.17□□□□□ -2.38
CCDC43Q96MW1 Y_RNA.105-201ENST00000363182 111 ntBASIC0.17□□□□□ -2.38
CCDC43Q96MW1 RNU6-290P-201ENST00000365212 101 ntBASIC0.17□□□□□ -2.38
CCDC43Q96MW1 MIR7-2-201ENST00000384970 110 ntBASIC0.17□□□□□ -2.38
CCDC43Q96MW1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
CCDC43Q96MW1 SNORD77.3-201ENST00000391113 65 ntBASIC0.17□□□□□ -2.38
CCDC43Q96MW1 AF228730.3-201ENST00000436691 102 ntBASIC0.17□□□□□ -2.38
CCDC43Q96MW1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.17□□□□□ -2.38
CCDC43Q96MW1 RNU2-11P-201ENST00000459191 187 ntBASIC0.17□□□□□ -2.38
CCDC43Q96MW1 MTND3P22-201ENST00000510932 243 ntBASIC0.17□□□□□ -2.38
CCDC43Q96MW1 RNU6-448P-201ENST00000517052 107 ntBASIC0.17□□□□□ -2.38
CCDC43Q96MW1 AP003327.1-201ENST00000529684 127 ntBASIC0.17□□□□□ -2.38
CCDC43Q96MW1 MIR4431-201ENST00000579990 94 ntBASIC0.17□□□□□ -2.38
CCDC43Q96MW1 AC078938.1-201ENST00000620993 318 ntBASIC0.17□□□□□ -2.38
CCDC43Q96MW1 RNU6-888P-201ENST00000363010 101 ntBASIC0.16□□□□□ -2.38
CCDC43Q96MW1 RNU4-73P-201ENST00000363164 141 ntBASIC0.16□□□□□ -2.38
CCDC43Q96MW1 Y_RNA.395-201ENST00000383945 109 ntBASIC0.16□□□□□ -2.38
CCDC43Q96MW1 SNORA8.2-201ENST00000384372 139 ntBASIC0.16□□□□□ -2.38
CCDC43Q96MW1 RNU6-823P-201ENST00000391042 103 ntBASIC0.16□□□□□ -2.38
CCDC43Q96MW1 RNU6-121P-201ENST00000410525 99 ntBASIC0.16□□□□□ -2.38
CCDC43Q96MW1 RNU7-96P-201ENST00000459535 64 ntBASIC0.16□□□□□ -2.38
CCDC43Q96MW1 RNU6-504P-201ENST00000516568 104 ntBASIC0.16□□□□□ -2.38
CCDC43Q96MW1 AL133255.1-201ENST00000606374 441 ntBASIC0.16□□□□□ -2.38
CCDC43Q96MW1 MIR8087-201ENST00000612745 78 ntBASIC0.16□□□□□ -2.38
CCDC43Q96MW1 Y_RNA.802-201ENST00000614892 130 ntBASIC0.16□□□□□ -2.38
CCDC43Q96MW1 AC090971.5-201ENST00000621102 293 ntBASIC0.16□□□□□ -2.38
CCDC43Q96MW1 snoU18.1-201ENST00000629629 71 ntBASIC0.16□□□□□ -2.38
CCDC43Q96MW1 MIR369-201ENST00000362155 70 ntBASIC0.15□□□□□ -2.39
CCDC43Q96MW1 MIR342-201ENST00000362212 99 ntBASIC0.15□□□□□ -2.39
CCDC43Q96MW1 SNORA25.1-201ENST00000362326 128 ntBASIC0.15□□□□□ -2.39
CCDC43Q96MW1 RNU4-67P-201ENST00000364569 141 ntBASIC0.15□□□□□ -2.39
CCDC43Q96MW1 RNU6-514P-201ENST00000384208 107 ntBASIC0.15□□□□□ -2.39
CCDC43Q96MW1 Y_RNA.567-201ENST00000384736 106 ntBASIC0.15□□□□□ -2.39
CCDC43Q96MW1 MT-TF-201ENST00000387314 71 ntBASIC0.15□□□□□ -2.39
CCDC43Q96MW1 MIR526A2-201ENST00000390198 65 ntBASIC0.15□□□□□ -2.39
CCDC43Q96MW1 MIR548I3-201ENST00000408378 149 ntBASIC0.15□□□□□ -2.39
CCDC43Q96MW1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms