Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.19□□□□□ -2.38
CCDC50Q8IVM0 AC022523.2-201ENST00000561045 150 ntBASIC0.19□□□□□ -2.38
CCDC50Q8IVM0 SNORD92-201ENST00000585078 85 ntBASIC0.19□□□□□ -2.38
CCDC50Q8IVM0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
CCDC50Q8IVM0 RNU4-73P-201ENST00000363164 141 ntBASIC0.18□□□□□ -2.38
CCDC50Q8IVM0 SNORA1.1-201ENST00000364671 133 ntBASIC0.18□□□□□ -2.38
CCDC50Q8IVM0 Y_RNA.354-201ENST00000365448 111 ntBASIC0.18□□□□□ -2.38
CCDC50Q8IVM0 MIR215-201ENST00000384858 110 ntBASIC0.18□□□□□ -2.38
CCDC50Q8IVM0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
CCDC50Q8IVM0 RNU7-53P-201ENST00000516705 60 ntBASIC0.18□□□□□ -2.38
CCDC50Q8IVM0 RNU2-31P-201ENST00000516954 155 ntBASIC0.18□□□□□ -2.38
CCDC50Q8IVM0 AC100767.1-201ENST00000528178 123 ntBASIC0.18□□□□□ -2.38
CCDC50Q8IVM0 MIR3678-201ENST00000578455 94 ntBASIC0.18□□□□□ -2.38
CCDC50Q8IVM0 AC090574.1-201ENST00000623186 233 ntBASIC0.18□□□□□ -2.38
CCDC50Q8IVM0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
CCDC50Q8IVM0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CCDC50Q8IVM0 MIR30D-201ENST00000362283 70 ntBASIC0.17□□□□□ -2.38
CCDC50Q8IVM0 Y_RNA.7-201ENST00000362352 102 ntBASIC0.17□□□□□ -2.38
CCDC50Q8IVM0 RNA5SP62-201ENST00000363457 110 ntBASIC0.17□□□□□ -2.38
CCDC50Q8IVM0 Y_RNA.380-201ENST00000365663 111 ntBASIC0.17□□□□□ -2.38
CCDC50Q8IVM0 MIR563-201ENST00000385080 79 ntBASIC0.17□□□□□ -2.38
CCDC50Q8IVM0 RNU6-823P-201ENST00000391042 103 ntBASIC0.17□□□□□ -2.38
CCDC50Q8IVM0 AF228730.3-201ENST00000436691 102 ntBASIC0.17□□□□□ -2.38
CCDC50Q8IVM0 MIR4431-201ENST00000579990 94 ntBASIC0.17□□□□□ -2.38
CCDC50Q8IVM0 AL133255.1-201ENST00000606374 441 ntBASIC0.17□□□□□ -2.38
CCDC50Q8IVM0 AL008718.3-201ENST00000610217 321 ntBASIC0.17□□□□□ -2.38
CCDC50Q8IVM0 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
CCDC50Q8IVM0 MIR6515-201ENST00000619843 57 ntBASIC0.17□□□□□ -2.38
CCDC50Q8IVM0 Y_RNA.116-201ENST00000363292 103 ntBASIC0.16□□□□□ -2.38
CCDC50Q8IVM0 SNORD118-201ENST00000363593 134 ntBASIC0.16□□□□□ -2.38
CCDC50Q8IVM0 Y_RNA.419-201ENST00000384041 102 ntBASIC0.16□□□□□ -2.38
CCDC50Q8IVM0 SNORA8.2-201ENST00000384372 139 ntBASIC0.16□□□□□ -2.38
CCDC50Q8IVM0 Y_RNA.541-201ENST00000384640 113 ntBASIC0.16□□□□□ -2.38
CCDC50Q8IVM0 Y_RNA.581-201ENST00000391017 97 ntBASIC0.16□□□□□ -2.38
CCDC50Q8IVM0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.16□□□□□ -2.38
CCDC50Q8IVM0 MTND5P20-201ENST00000448677 143 ntBASIC0.16□□□□□ -2.38
CCDC50Q8IVM0 RNU2-11P-201ENST00000459191 187 ntBASIC0.16□□□□□ -2.38
CCDC50Q8IVM0 MTND3P22-201ENST00000510932 243 ntBASIC0.16□□□□□ -2.38
CCDC50Q8IVM0 AC133485.4-201ENST00000561835 220 ntBASIC0.16□□□□□ -2.38
CCDC50Q8IVM0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.16□□□□□ -2.38
CCDC50Q8IVM0 AC078938.1-201ENST00000620993 318 ntBASIC0.16□□□□□ -2.38
CCDC50Q8IVM0 snoU18.1-201ENST00000629629 71 ntBASIC0.16□□□□□ -2.38
CCDC50Q8IVM0 MIR342-201ENST00000362212 99 ntBASIC0.15□□□□□ -2.39
CCDC50Q8IVM0 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
CCDC50Q8IVM0 snoU2_19.2-201ENST00000363024 80 ntBASIC0.15□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.395-201ENST00000383945 109 ntBASIC0.15□□□□□ -2.39
CCDC50Q8IVM0 RNU6-815P-201ENST00000384080 113 ntBASIC0.15□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.567-201ENST00000384736 106 ntBASIC0.15□□□□□ -2.39
CCDC50Q8IVM0 SNORD71-201ENST00000411292 86 ntBASIC0.15□□□□□ -2.39
CCDC50Q8IVM0 RNU7-45P-201ENST00000459460 63 ntBASIC0.15□□□□□ -2.39
CCDC50Q8IVM0 RNU6-365P-201ENST00000517113 106 ntBASIC0.15□□□□□ -2.39
CCDC50Q8IVM0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.15□□□□□ -2.39
CCDC50Q8IVM0 MIR4662B-201ENST00000579498 81 ntBASIC0.15□□□□□ -2.39
CCDC50Q8IVM0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.15□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.24-201ENST00000362508 103 ntBASIC0.14□□□□□ -2.39
CCDC50Q8IVM0 RNU6-888P-201ENST00000363010 101 ntBASIC0.14□□□□□ -2.39
CCDC50Q8IVM0 SNORA36.1-201ENST00000363424 132 ntBASIC0.14□□□□□ -2.39
CCDC50Q8IVM0 RNU6-806P-201ENST00000365147 105 ntBASIC0.14□□□□□ -2.39
CCDC50Q8IVM0 RNU6-290P-201ENST00000365212 101 ntBASIC0.14□□□□□ -2.39
CCDC50Q8IVM0 RNA5SP117-201ENST00000365294 118 ntBASIC0.14□□□□□ -2.39
CCDC50Q8IVM0 SNORD24-201ENST00000383884 75 ntBASIC0.14□□□□□ -2.39
CCDC50Q8IVM0 MIR548I3-201ENST00000408378 149 ntBASIC0.14□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.617-201ENST00000410920 90 ntBASIC0.14□□□□□ -2.39
CCDC50Q8IVM0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.14□□□□□ -2.39
CCDC50Q8IVM0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.14□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.702-201ENST00000516843 96 ntBASIC0.14□□□□□ -2.39
CCDC50Q8IVM0 RNU6-448P-201ENST00000517052 107 ntBASIC0.14□□□□□ -2.39
CCDC50Q8IVM0 AL589743.1-201ENST00000551932 2712 ntBASIC0.13□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.26-201ENST00000362539 101 ntBASIC0.13□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.91-201ENST00000363042 107 ntBASIC0.13□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.217-201ENST00000364214 105 ntBASIC0.13□□□□□ -2.39
CCDC50Q8IVM0 RNU6-740P-201ENST00000364734 105 ntBASIC0.13□□□□□ -2.39
CCDC50Q8IVM0 RNU6-597P-201ENST00000365620 102 ntBASIC0.13□□□□□ -2.39
CCDC50Q8IVM0 RPL21P38-201ENST00000418090 167 ntBASIC0.13□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.641-201ENST00000459414 105 ntBASIC0.13□□□□□ -2.39
CCDC50Q8IVM0 RNU6-998P-201ENST00000515894 101 ntBASIC0.13□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.804-201ENST00000615262 101 ntBASIC0.13□□□□□ -2.39
CCDC50Q8IVM0 AC090971.5-201ENST00000621102 293 ntBASIC0.13□□□□□ -2.39
CCDC50Q8IVM0 SNORA25.1-201ENST00000362326 128 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.66-201ENST00000362862 102 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 SNORA63.7-201ENST00000365579 123 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.389-201ENST00000383924 113 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 MIR644A-201ENST00000385262 94 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 SNORD77.3-201ENST00000391113 65 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 MIR1252-201ENST00000408861 65 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 ELOCP20-201ENST00000422460 345 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.631-201ENST00000459607 101 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 RNU6-863P-201ENST00000515989 104 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 MIR548S-201ENST00000581352 82 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 AC006006.1-201ENST00000603082 144 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.802-201ENST00000614892 130 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 AP001282.2-201ENST00000616149 309 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 MIR8066-201ENST00000617280 78 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 MIR924-201ENST00000638017 53 ntBASIC0.12□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.16-201ENST00000362421 102 ntBASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.122-201ENST00000363331 96 ntBASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.229-201ENST00000364347 113 ntBASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 SNORD42.2-201ENST00000365570 69 ntBASIC0.11□□□□□ -2.39
CCDC50Q8IVM0 Y_RNA.440-201ENST00000384120 114 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms