Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNU6-504P-201ENST00000516568 104 ntBASIC0.71□□□□□ -2.3
PRPF39Q86UA1 RNU7-53P-201ENST00000516705 60 ntBASIC0.71□□□□□ -2.3
PRPF39Q86UA1 RNU6-1137P-201ENST00000517073 99 ntBASIC0.71□□□□□ -2.3
PRPF39Q86UA1 AP000942.4-201ENST00000604811 241 ntBASIC0.71□□□□□ -2.3
PRPF39Q86UA1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.71□□□□□ -2.3
PRPF39Q86UA1 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
PRPF39Q86UA1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.7□□□□□ -2.3
PRPF39Q86UA1 Y_RNA.37-201ENST00000362606 108 ntBASIC0.7□□□□□ -2.3
PRPF39Q86UA1 Y_RNA.229-201ENST00000364347 113 ntBASIC0.7□□□□□ -2.3
PRPF39Q86UA1 Y_RNA.275-201ENST00000364726 110 ntBASIC0.7□□□□□ -2.3
PRPF39Q86UA1 SNORD24-201ENST00000383884 75 ntBASIC0.7□□□□□ -2.3
PRPF39Q86UA1 SNORA36.2-201ENST00000384004 127 ntBASIC0.7□□□□□ -2.3
PRPF39Q86UA1 SNORA27-201ENST00000384323 126 ntBASIC0.7□□□□□ -2.3
PRPF39Q86UA1 RNU2-70P-201ENST00000410718 179 ntBASIC0.7□□□□□ -2.3
PRPF39Q86UA1 SNORD83.1-201ENST00000411362 77 ntBASIC0.7□□□□□ -2.3
PRPF39Q86UA1 AC007751.1-201ENST00000529260 376 ntBASIC0.7□□□□□ -2.3
PRPF39Q86UA1 MIR4771-2-201ENST00000577758 74 ntBASIC0.7□□□□□ -2.3
PRPF39Q86UA1 MIR4771-1-201ENST00000582617 74 ntBASIC0.7□□□□□ -2.3
PRPF39Q86UA1 Y_RNA.44-201ENST00000362676 108 ntBASIC0.69□□□□□ -2.3
PRPF39Q86UA1 Y_RNA.117-201ENST00000363294 101 ntBASIC0.69□□□□□ -2.3
PRPF39Q86UA1 SNORD45.3-201ENST00000363836 72 ntBASIC0.69□□□□□ -2.3
PRPF39Q86UA1 SNORA24-201ENST00000384096 131 ntBASIC0.69□□□□□ -2.3
PRPF39Q86UA1 SNORD38B-201ENST00000384690 67 ntBASIC0.69□□□□□ -2.3
PRPF39Q86UA1 MIR520F-201ENST00000384824 87 ntBASIC0.69□□□□□ -2.3
PRPF39Q86UA1 MIR518F-201ENST00000384973 87 ntBASIC0.69□□□□□ -2.3
PRPF39Q86UA1 RNU7-62P-201ENST00000458856 62 ntBASIC0.69□□□□□ -2.3
PRPF39Q86UA1 TRBVB-201ENST00000477100 408 ntBASIC0.69□□□□□ -2.3
PRPF39Q86UA1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.69□□□□□ -2.3
PRPF39Q86UA1 RNU6-1299P-201ENST00000516316 100 ntBASIC0.69□□□□□ -2.3
PRPF39Q86UA1 SNORA18.4-201ENST00000516440 124 ntBASIC0.69□□□□□ -2.3
PRPF39Q86UA1 Z83818.1-201ENST00000603584 150 ntBASIC0.69□□□□□ -2.3
PRPF39Q86UA1 SNORD38B-202ENST00000625943 69 ntBASIC0.69□□□□□ -2.3
PRPF39Q86UA1 SNORD114-26-201ENST00000363543 72 ntBASIC0.68□□□□□ -2.3
PRPF39Q86UA1 RNU6-580P-201ENST00000365159 107 ntBASIC0.68□□□□□ -2.3
PRPF39Q86UA1 SNORD61-201ENST00000384252 73 ntBASIC0.68□□□□□ -2.3
PRPF39Q86UA1 Y_RNA.572-201ENST00000384757 98 ntBASIC0.68□□□□□ -2.3
PRPF39Q86UA1 AC244098.3-201ENST00000424803 96 ntBASIC0.68□□□□□ -2.3
PRPF39Q86UA1 snoU13.21-201ENST00000459368 105 ntBASIC0.68□□□□□ -2.3
PRPF39Q86UA1 RPS29P24-201ENST00000486345 171 ntBASIC0.68□□□□□ -2.3
PRPF39Q86UA1 MIR6513-201ENST00000621188 64 ntBASIC0.68□□□□□ -2.3
PRPF39Q86UA1 SNORA63C-201ENST00000364578 129 ntBASIC0.67□□□□□ -2.3
PRPF39Q86UA1 Y_RNA.393-201ENST00000383936 102 ntBASIC0.67□□□□□ -2.3
PRPF39Q86UA1 MIR626-201ENST00000385032 94 ntBASIC0.67□□□□□ -2.3
PRPF39Q86UA1 AC090844.1-201ENST00000422019 156 ntBASIC0.67□□□□□ -2.3
PRPF39Q86UA1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.67□□□□□ -2.3
PRPF39Q86UA1 RNA5SP121-201ENST00000516537 101 ntBASIC0.67□□□□□ -2.3
PRPF39Q86UA1 AC004812.1-201ENST00000540773 146 ntBASIC0.67□□□□□ -2.3
PRPF39Q86UA1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
PRPF39Q86UA1 RNU6-888P-201ENST00000363010 101 ntBASIC0.66□□□□□ -2.3
PRPF39Q86UA1 MIR216A-201ENST00000385063 110 ntBASIC0.66□□□□□ -2.3
PRPF39Q86UA1 MIR520H-201ENST00000385126 88 ntBASIC0.66□□□□□ -2.3
PRPF39Q86UA1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.66□□□□□ -2.3
PRPF39Q86UA1 AC015818.7-201ENST00000428754 109 ntBASIC0.66□□□□□ -2.3
PRPF39Q86UA1 AC087499.7-201ENST00000441958 109 ntBASIC0.66□□□□□ -2.3
PRPF39Q86UA1 RNU7-73P-201ENST00000458743 63 ntBASIC0.66□□□□□ -2.3
PRPF39Q86UA1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.66□□□□□ -2.3
PRPF39Q86UA1 Y_RNA.679-201ENST00000516416 91 ntBASIC0.66□□□□□ -2.3
PRPF39Q86UA1 SNORD36C-201ENST00000516733 66 ntBASIC0.66□□□□□ -2.3
PRPF39Q86UA1 RN7SL793P-201ENST00000583259 296 ntBASIC0.66□□□□□ -2.3
PRPF39Q86UA1 U6.104-201ENST00000637979 90 ntBASIC0.66□□□□□ -2.3
PRPF39Q86UA1 Y_RNA.7-201ENST00000362352 102 ntBASIC0.65□□□□□ -2.31
PRPF39Q86UA1 Y_RNA.199-201ENST00000364014 102 ntBASIC0.65□□□□□ -2.31
PRPF39Q86UA1 SNORA1.1-201ENST00000364671 133 ntBASIC0.65□□□□□ -2.31
PRPF39Q86UA1 Y_RNA.432-201ENST00000384087 111 ntBASIC0.65□□□□□ -2.31
PRPF39Q86UA1 MIR7-2-201ENST00000384970 110 ntBASIC0.65□□□□□ -2.31
PRPF39Q86UA1 Y_RNA.622-201ENST00000411091 108 ntBASIC0.65□□□□□ -2.31
PRPF39Q86UA1 AL138752.1-201ENST00000452964 351 ntBASIC0.65□□□□□ -2.31
PRPF39Q86UA1 Y_RNA.237-201ENST00000364439 102 ntBASIC0.64□□□□□ -2.31
PRPF39Q86UA1 RNU6-740P-201ENST00000364734 105 ntBASIC0.64□□□□□ -2.31
PRPF39Q86UA1 MIR548A2-201ENST00000384956 97 ntBASIC0.64□□□□□ -2.31
PRPF39Q86UA1 RNU6-913P-201ENST00000390913 95 ntBASIC0.64□□□□□ -2.31
PRPF39Q86UA1 Y_RNA.590-201ENST00000410140 107 ntBASIC0.64□□□□□ -2.31
PRPF39Q86UA1 RNU2-55P-201ENST00000411146 174 ntBASIC0.64□□□□□ -2.31
PRPF39Q86UA1 RNU6-938P-201ENST00000411285 103 ntBASIC0.64□□□□□ -2.31
PRPF39Q86UA1 RNU4-54P-201ENST00000516428 129 ntBASIC0.64□□□□□ -2.31
PRPF39Q86UA1 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
PRPF39Q86UA1 MIR342-201ENST00000362212 99 ntBASIC0.63□□□□□ -2.31
PRPF39Q86UA1 Y_RNA.11-201ENST00000362375 109 ntBASIC0.63□□□□□ -2.31
PRPF39Q86UA1 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
PRPF39Q86UA1 RNU6-1109P-201ENST00000391187 107 ntBASIC0.63□□□□□ -2.31
PRPF39Q86UA1 AC244023.1-201ENST00000426884 112 ntBASIC0.63□□□□□ -2.31
PRPF39Q86UA1 MTCYBP6-201ENST00000441810 138 ntBASIC0.63□□□□□ -2.31
PRPF39Q86UA1 RNU6-635P-201ENST00000516651 102 ntBASIC0.63□□□□□ -2.31
PRPF39Q86UA1 RNU6-1153P-201ENST00000516760 105 ntBASIC0.63□□□□□ -2.31
PRPF39Q86UA1 AC242498.1-201ENST00000604134 111 ntBASIC0.63□□□□□ -2.31
PRPF39Q86UA1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
PRPF39Q86UA1 RNU6-1309P-201ENST00000363305 108 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 RNU6-238P-201ENST00000363313 106 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 Y_RNA.634-201ENST00000364811 113 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 RNU6-945P-201ENST00000383947 107 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 RNU6-1189P-201ENST00000383958 107 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 Y_RNA.422-201ENST00000384054 114 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 RNY3P5-201ENST00000384127 102 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 MIR573-201ENST00000384964 99 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 MT-TT-201ENST00000387460 66 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 MIR936-201ENST00000401264 98 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 HMGN1P33-201ENST00000432945 451 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 AF228730.3-201ENST00000436691 102 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 204.5 ms