Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 Y_RNA.193-201ENST00000363979 102 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 SNORD115-42-201ENST00000364273 82 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 RNU6-923P-201ENST00000364753 107 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 SNORD115-15-201ENST00000364809 81 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 SNORD115-1-201ENST00000364961 82 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 RNU6-702P-201ENST00000364982 107 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 SNORD114-24-201ENST00000365029 72 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 SNORD115-26-201ENST00000365067 82 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 SNORD115-10-201ENST00000365073 81 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 SNORD115-43-201ENST00000365503 82 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 SNORD115-36-201ENST00000365629 82 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 SNORA26-201ENST00000391286 122 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 MIR942-201ENST00000401111 86 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.94□□□□□ -2.26
SLC9A3P48764 RNA5SP153-201ENST00000516498 76 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 SNORD114-21-201ENST00000606412 72 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 SNORD115-40-201ENST00000606510 82 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 AC134878.1-201ENST00000619901 243 ntBASIC0.94□□□□□ -2.26
SLC9A3P48764 RNU6-53P-201ENST00000365367 106 ntBASIC0.93□□□□□ -2.26
SLC9A3P48764 SNORA1-201ENST00000384107 130 ntBASIC0.93□□□□□ -2.26
SLC9A3P48764 Y_RNA.447-201ENST00000384184 113 ntBASIC0.93□□□□□ -2.26
SLC9A3P48764 MIR200A-201ENST00000384875 90 ntBASIC0.93□□□□□ -2.26
SLC9A3P48764 MIR499A-201ENST00000384903 122 ntBASIC0.93□□□□□ -2.26
SLC9A3P48764 SNORA40.5-201ENST00000391061 128 ntBASIC0.93□□□□□ -2.26
SLC9A3P48764 Y_RNA.626-201ENST00000411288 95 ntBASIC0.93□□□□□ -2.26
SLC9A3P48764 AC090844.1-201ENST00000422019 156 ntBASIC0.93□□□□□ -2.26
SLC9A3P48764 AC087343.1-201ENST00000477341 475 ntBASIC0.93□□□□□ -2.26
SLC9A3P48764 MIR3149-201ENST00000584629 83 ntBASIC0.93□□□□□ -2.26
SLC9A3P48764 RNU2-4P-201ENST00000606190 192 ntBASIC0.93□□□□□ -2.26
SLC9A3P48764 RNU6-94P-201ENST00000607728 107 ntBASIC0.93□□□□□ -2.26
SLC9A3P48764 AL391516.1-201ENST00000554380 2449 ntBASIC0.93□□□□□ -2.26
SLC9A3P48764 Y_RNA.307-201ENST00000365022 117 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 RNU6-396P-201ENST00000365369 105 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 RNU6-728P-201ENST00000365375 104 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 SNORA24-201ENST00000384096 131 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 Y_RNA.452-201ENST00000384202 108 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 SNORA27-201ENST00000384323 126 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 SNORA2B-201ENST00000384583 137 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 SNORD58.1-201ENST00000391313 66 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 AL138752.1-201ENST00000452964 351 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 MIR2115-201ENST00000516657 100 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 RNU6-111P-201ENST00000517179 105 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 MIR4744-201ENST00000581563 82 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 AC097639.2-201ENST00000603159 172 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 AP000942.4-201ENST00000604811 241 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 7SK.10-201ENST00000621414 298 ntBASIC0.92□□□□□ -2.26
SLC9A3P48764 Y_RNA.478-201ENST00000384358 107 ntBASIC0.91□□□□□ -2.26
SLC9A3P48764 RNU6-125P-201ENST00000384505 107 ntBASIC0.91□□□□□ -2.26
SLC9A3P48764 RNU6-913P-201ENST00000390913 95 ntBASIC0.91□□□□□ -2.26
SLC9A3P48764 AL121914.1-201ENST00000450188 156 ntBASIC0.91□□□□□ -2.26
SLC9A3P48764 snoU13.16-201ENST00000459350 104 ntBASIC0.91□□□□□ -2.26
SLC9A3P48764 PDCD5P2-201ENST00000507570 312 ntBASIC0.91□□□□□ -2.26
SLC9A3P48764 RNU6-197P-201ENST00000516680 100 ntBASIC0.91□□□□□ -2.26
SLC9A3P48764 AL162730.1-201ENST00000605734 292 ntBASIC0.91□□□□□ -2.26
SLC9A3P48764 AL020996.3-201ENST00000606617 222 ntBASIC0.91□□□□□ -2.26
SLC9A3P48764 AC106800.4-201ENST00000614905 153 ntBASIC0.91□□□□□ -2.26
SLC9A3P48764 RNU6-103P-201ENST00000363686 107 ntBASIC0.9□□□□□ -2.27
SLC9A3P48764 Y_RNA.224-201ENST00000364308 111 ntBASIC0.9□□□□□ -2.27
SLC9A3P48764 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
SLC9A3P48764 SNORD113.3-201ENST00000364630 78 ntBASIC0.9□□□□□ -2.27
SLC9A3P48764 SNORA20.1-201ENST00000364790 130 ntBASIC0.9□□□□□ -2.27
SLC9A3P48764 RNU6-463P-201ENST00000384340 107 ntBASIC0.9□□□□□ -2.27
SLC9A3P48764 RNU6-205P-201ENST00000390858 107 ntBASIC0.9□□□□□ -2.27
SLC9A3P48764 SNORD77.3-201ENST00000391113 65 ntBASIC0.9□□□□□ -2.27
SLC9A3P48764 RNU6-613P-201ENST00000410412 108 ntBASIC0.9□□□□□ -2.27
SLC9A3P48764 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.9□□□□□ -2.27
SLC9A3P48764 RNU6-1023P-201ENST00000516137 106 ntBASIC0.9□□□□□ -2.27
SLC9A3P48764 RNA5SP102-201ENST00000516865 106 ntBASIC0.9□□□□□ -2.27
SLC9A3P48764 MIR4308-201ENST00000580634 81 ntBASIC0.9□□□□□ -2.27
SLC9A3P48764 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.9□□□□□ -2.27
SLC9A3P48764 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SLC9A3P48764 MIR342-201ENST00000362212 99 ntBASIC0.89□□□□□ -2.27
SLC9A3P48764 Y_RNA.144-201ENST00000363521 113 ntBASIC0.89□□□□□ -2.27
SLC9A3P48764 RNU6-578P-201ENST00000390980 103 ntBASIC0.89□□□□□ -2.27
SLC9A3P48764 RPS29P24-201ENST00000486345 171 ntBASIC0.89□□□□□ -2.27
SLC9A3P48764 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.89□□□□□ -2.27
SLC9A3P48764 MIR3129-201ENST00000581095 76 ntBASIC0.89□□□□□ -2.27
SLC9A3P48764 AC108706.1-201ENST00000611053 297 ntBASIC0.89□□□□□ -2.27
SLC9A3P48764 MIR376A2-201ENST00000636782 80 ntBASIC0.89□□□□□ -2.27
SLC9A3P48764 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SLC9A3P48764 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.88□□□□□ -2.27
SLC9A3P48764 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SLC9A3P48764 Y_RNA.7-201ENST00000362352 102 ntBASIC0.88□□□□□ -2.27
SLC9A3P48764 RNU6-1189P-201ENST00000383958 107 ntBASIC0.88□□□□□ -2.27
SLC9A3P48764 Y_RNA.410-201ENST00000383992 113 ntBASIC0.88□□□□□ -2.27
SLC9A3P48764 Y_RNA.440-201ENST00000384120 114 ntBASIC0.88□□□□□ -2.27
SLC9A3P48764 SNORD111-201ENST00000408139 94 ntBASIC0.88□□□□□ -2.27
SLC9A3P48764 SNORA79-201ENST00000408376 140 ntBASIC0.88□□□□□ -2.27
SLC9A3P48764 MIR1276-201ENST00000408707 83 ntBASIC0.88□□□□□ -2.27
SLC9A3P48764 HMGN1P33-201ENST00000432945 451 ntBASIC0.88□□□□□ -2.27
SLC9A3P48764 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.88□□□□□ -2.27
SLC9A3P48764 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.88□□□□□ -2.27
SLC9A3P48764 Y_RNA.797-201ENST00000515977 94 ntBASIC0.88□□□□□ -2.27
SLC9A3P48764 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
SLC9A3P48764 MIR4661-201ENST00000582720 75 ntBASIC0.88□□□□□ -2.27
SLC9A3P48764 RNU6-1335P-201ENST00000365426 107 ntBASIC0.87□□□□□ -2.27
SLC9A3P48764 SNORD89-201ENST00000390981 114 ntBASIC0.87□□□□□ -2.27
SLC9A3P48764 RNU6-994P-201ENST00000410507 111 ntBASIC0.87□□□□□ -2.27
SLC9A3P48764 RNU4-43P-201ENST00000410628 137 ntBASIC0.87□□□□□ -2.27
SLC9A3P48764 AC244023.1-201ENST00000426884 112 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 214.8 ms