Protein–RNA interactions for Protein: P17035

ZNF28, Zinc finger protein 28, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28P17035 MIR4709-201ENST00000577272 72 ntBASIC2.14□□□□□ -2.07
ZNF28P17035 MIR4524B-201ENST00000581569 115 ntBASIC2.14□□□□□ -2.07
ZNF28P17035 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.14□□□□□ -2.07
ZNF28P17035 MIR6895-201ENST00000613497 78 ntBASIC2.14□□□□□ -2.07
ZNF28P17035 MIR203B-201ENST00000636080 86 ntBASIC2.14□□□□□ -2.07
ZNF28P17035 AL162726.3-218ENST00000636401 95 ntBASIC2.14□□□□□ -2.07
ZNF28P17035 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ZNF28P17035 SNORD114-1-201ENST00000362705 72 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 SNORA70.7-201ENST00000384159 133 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 MIR144-201ENST00000384886 86 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 MIR136-201ENST00000385207 82 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 AL023284.1-201ENST00000403956 276 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 SNORA19.1-201ENST00000410656 129 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 RNA5SP501-201ENST00000410990 112 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 RNU6-970P-201ENST00000516312 107 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 RNU6-109P-201ENST00000516364 107 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 RNU6-184P-201ENST00000516514 107 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 SCARNA16.3-201ENST00000516595 184 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 SUB1P4-201ENST00000566062 339 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 AC092881.1-201ENST00000638218 2733 ntBASIC2.13□□□□□ -2.07
ZNF28P17035 Y_RNA.78-201ENST00000362970 110 ntBASIC2.12□□□□□ -2.07
ZNF28P17035 Y_RNA.370-201ENST00000365589 108 ntBASIC2.12□□□□□ -2.07
ZNF28P17035 MIR764-201ENST00000390811 85 ntBASIC2.12□□□□□ -2.07
ZNF28P17035 RNU6-816P-201ENST00000390914 107 ntBASIC2.12□□□□□ -2.07
ZNF28P17035 RNU6-1268P-201ENST00000391214 107 ntBASIC2.12□□□□□ -2.07
ZNF28P17035 RNU6-1239P-201ENST00000391310 107 ntBASIC2.12□□□□□ -2.07
ZNF28P17035 SNORD23.1-201ENST00000408212 104 ntBASIC2.12□□□□□ -2.07
ZNF28P17035 MIR1912-201ENST00000410389 80 ntBASIC2.12□□□□□ -2.07
ZNF28P17035 AL512326.2-201ENST00000426359 151 ntBASIC2.12□□□□□ -2.07
ZNF28P17035 RNU7-45P-201ENST00000459460 63 ntBASIC2.12□□□□□ -2.07
ZNF28P17035 AC004812.1-201ENST00000540773 146 ntBASIC2.12□□□□□ -2.07
ZNF28P17035 AC021506.2-201ENST00000612354 169 ntBASIC2.12□□□□□ -2.07
ZNF28P17035 AL513423.1-201ENST00000621695 132 ntBASIC2.12□□□□□ -2.07
ZNF28P17035 MIR6766-201ENST00000622641 72 ntBASIC2.12□□□□□ -2.07
ZNF28P17035 RNU6-112P-201ENST00000363599 104 ntBASIC2.11□□□□□ -2.07
ZNF28P17035 RNU6-1131P-201ENST00000364955 107 ntBASIC2.11□□□□□ -2.07
ZNF28P17035 RNU6-296P-201ENST00000384608 107 ntBASIC2.11□□□□□ -2.07
ZNF28P17035 RNA5SP270-201ENST00000411361 118 ntBASIC2.11□□□□□ -2.07
ZNF28P17035 snoU13.27-201ENST00000459278 104 ntBASIC2.11□□□□□ -2.07
ZNF28P17035 RPS23P4-201ENST00000487908 423 ntBASIC2.11□□□□□ -2.07
ZNF28P17035 SNORA31.11-201ENST00000516528 139 ntBASIC2.11□□□□□ -2.07
ZNF28P17035 RNA5SP481-201ENST00000516814 122 ntBASIC2.11□□□□□ -2.07
ZNF28P17035 MIR4769-201ENST00000584126 77 ntBASIC2.11□□□□□ -2.07
ZNF28P17035 AL513534.2-201ENST00000603836 250 ntBASIC2.11□□□□□ -2.07
ZNF28P17035 Y_RNA.818-201ENST00000618813 71 ntBASIC2.11□□□□□ -2.07
ZNF28P17035 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ZNF28P17035 Y_RNA.531-201ENST00000384589 121 ntBASIC2.1□□□□□ -2.07
ZNF28P17035 MIR660-201ENST00000385235 97 ntBASIC2.1□□□□□ -2.07
ZNF28P17035 POLR2J4-204ENST00000418424 324 ntBASIC2.1□□□□□ -2.07
ZNF28P17035 RNU7-67P-201ENST00000459003 62 ntBASIC2.1□□□□□ -2.07
ZNF28P17035 RNU6-237P-201ENST00000515985 71 ntBASIC2.1□□□□□ -2.07
ZNF28P17035 RNU6-904P-201ENST00000516206 101 ntBASIC2.1□□□□□ -2.07
ZNF28P17035 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.1□□□□□ -2.07
ZNF28P17035 RNU7-53P-201ENST00000516705 60 ntBASIC2.1□□□□□ -2.07
ZNF28P17035 RNU7-193P-201ENST00000516723 65 ntBASIC2.1□□□□□ -2.07
ZNF28P17035 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.1□□□□□ -2.07
ZNF28P17035 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.1□□□□□ -2.07
ZNF28P17035 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
ZNF28P17035 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
ZNF28P17035 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.09□□□□□ -2.07
ZNF28P17035 AL591806.2-201ENST00000433122 173 ntBASIC2.09□□□□□ -2.07
ZNF28P17035 PGBD4P5-201ENST00000445958 426 ntBASIC2.09□□□□□ -2.07
ZNF28P17035 RNU6-893P-201ENST00000458841 100 ntBASIC2.09□□□□□ -2.07
ZNF28P17035 RNU7-113P-201ENST00000459273 62 ntBASIC2.09□□□□□ -2.07
ZNF28P17035 RNU6-958P-201ENST00000516995 106 ntBASIC2.09□□□□□ -2.07
ZNF28P17035 AC087741.2-201ENST00000619415 172 ntBASIC2.09□□□□□ -2.07
ZNF28P17035 SNORD3E-202ENST00000627253 216 ntBASIC2.09□□□□□ -2.07
ZNF28P17035 AC095038.3-201ENST00000634439 195 ntBASIC2.09□□□□□ -2.07
ZNF28P17035 RNU6-661P-201ENST00000362409 107 ntBASIC2.08□□□□□ -2.08
ZNF28P17035 RNU6-294P-201ENST00000364999 102 ntBASIC2.08□□□□□ -2.08
ZNF28P17035 SNORA6-201ENST00000384033 151 ntBASIC2.08□□□□□ -2.08
ZNF28P17035 Y_RNA.507-201ENST00000384500 99 ntBASIC2.08□□□□□ -2.08
ZNF28P17035 MIR526A1-201ENST00000384897 85 ntBASIC2.08□□□□□ -2.08
ZNF28P17035 RPS29P29-201ENST00000456396 171 ntBASIC2.08□□□□□ -2.08
ZNF28P17035 AC099513.1-201ENST00000490423 301 ntBASIC2.08□□□□□ -2.08
ZNF28P17035 AC113410.1-201ENST00000505029 247 ntBASIC2.08□□□□□ -2.08
ZNF28P17035 MIR3152-201ENST00000579801 74 ntBASIC2.08□□□□□ -2.08
ZNF28P17035 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
ZNF28P17035 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ZNF28P17035 AP000648.3-201ENST00000623539 4507 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 AC005336.3-201ENST00000623833 2679 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 SNORD115-19-201ENST00000363098 82 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 SNORD115-18-201ENST00000363293 82 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 Y_RNA.171-201ENST00000363760 102 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 SNORD115-17-201ENST00000364612 82 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 Y_RNA.299-201ENST00000364973 94 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 RNU6-49P-201ENST00000384256 107 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 RNU6-1319P-201ENST00000390855 104 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 RNU6-747P-201ENST00000390928 104 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 SNORD28B-201ENST00000390993 75 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 RNU6-241P-201ENST00000391148 104 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 MIR1302-4-201ENST00000408701 150 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 RNU6-177P-201ENST00000411257 104 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 snoU13.23-201ENST00000458863 104 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 SNORD123-201ENST00000459473 70 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 RNU6-158P-201ENST00000517104 100 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 MIR3618-201ENST00000580330 88 ntBASIC2.07□□□□□ -2.08
ZNF28P17035 MIR5694-201ENST00000581190 76 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms