Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC087499.7-201ENST00000441958 109 ntBASIC0.73□□□□□ -2.29
KRT3P12035 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.73□□□□□ -2.29
KRT3P12035 SNORA18.4-201ENST00000516440 124 ntBASIC0.73□□□□□ -2.29
KRT3P12035 RNU6-126P-201ENST00000516685 103 ntBASIC0.73□□□□□ -2.29
KRT3P12035 MIR5688-201ENST00000580619 83 ntBASIC0.73□□□□□ -2.29
KRT3P12035 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.73□□□□□ -2.29
KRT3P12035 AL365265.1-201ENST00000621045 234 ntBASIC0.73□□□□□ -2.29
KRT3P12035 RNU6-1309P-201ENST00000363305 108 ntBASIC0.72□□□□□ -2.29
KRT3P12035 Y_RNA.145-201ENST00000363527 102 ntBASIC0.72□□□□□ -2.29
KRT3P12035 RNU6-694P-201ENST00000364071 147 ntBASIC0.72□□□□□ -2.29
KRT3P12035 Y_RNA.396-201ENST00000383949 103 ntBASIC0.72□□□□□ -2.29
KRT3P12035 RNU6-125P-201ENST00000384505 107 ntBASIC0.72□□□□□ -2.29
KRT3P12035 SNORA40.5-201ENST00000391061 128 ntBASIC0.72□□□□□ -2.29
KRT3P12035 RPS26P5-201ENST00000418544 335 ntBASIC0.72□□□□□ -2.29
KRT3P12035 AC090844.1-201ENST00000422019 156 ntBASIC0.72□□□□□ -2.29
KRT3P12035 MTND5P15-201ENST00000434246 349 ntBASIC0.72□□□□□ -2.29
KRT3P12035 RNU7-53P-201ENST00000516705 60 ntBASIC0.72□□□□□ -2.29
KRT3P12035 AC025627.3-201ENST00000582078 182 ntBASIC0.72□□□□□ -2.29
KRT3P12035 Y_RNA.149-201ENST00000363558 117 ntBASIC0.71□□□□□ -2.3
KRT3P12035 snoU2_19.4-201ENST00000364329 80 ntBASIC0.71□□□□□ -2.3
KRT3P12035 SNORA63C-201ENST00000364578 129 ntBASIC0.71□□□□□ -2.3
KRT3P12035 RNU6-934P-201ENST00000365154 107 ntBASIC0.71□□□□□ -2.3
KRT3P12035 AF228730.3-201ENST00000436691 102 ntBASIC0.71□□□□□ -2.3
KRT3P12035 SNRPGP8-201ENST00000454064 226 ntBASIC0.71□□□□□ -2.3
KRT3P12035 snoU13.21-201ENST00000459368 105 ntBASIC0.71□□□□□ -2.3
KRT3P12035 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.71□□□□□ -2.3
KRT3P12035 RNU2-13P-201ENST00000515909 113 ntBASIC0.71□□□□□ -2.3
KRT3P12035 RNU6-1110P-201ENST00000516462 101 ntBASIC0.71□□□□□ -2.3
KRT3P12035 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.71□□□□□ -2.3
KRT3P12035 AC011195.1-201ENST00000578177 177 ntBASIC0.71□□□□□ -2.3
KRT3P12035 AL353765.1-201ENST00000605514 183 ntBASIC0.71□□□□□ -2.3
KRT3P12035 AC104465.1-201ENST00000611365 139 ntBASIC0.71□□□□□ -2.3
KRT3P12035 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRT3P12035 MIR335-201ENST00000362173 94 ntBASIC0.7□□□□□ -2.3
KRT3P12035 MIR302B-201ENST00000362188 73 ntBASIC0.7□□□□□ -2.3
KRT3P12035 Y_RNA.122-201ENST00000363331 96 ntBASIC0.7□□□□□ -2.3
KRT3P12035 Y_RNA.168-201ENST00000363740 102 ntBASIC0.7□□□□□ -2.3
KRT3P12035 Y_RNA.191-201ENST00000363972 113 ntBASIC0.7□□□□□ -2.3
KRT3P12035 Y_RNA.634-201ENST00000364811 113 ntBASIC0.7□□□□□ -2.3
KRT3P12035 SNORD24-201ENST00000383884 75 ntBASIC0.7□□□□□ -2.3
KRT3P12035 SNORD38B-201ENST00000384690 67 ntBASIC0.7□□□□□ -2.3
KRT3P12035 SNORA79-201ENST00000408376 140 ntBASIC0.7□□□□□ -2.3
KRT3P12035 RNU6-938P-201ENST00000411285 103 ntBASIC0.7□□□□□ -2.3
KRT3P12035 HMGN1P33-201ENST00000432945 451 ntBASIC0.7□□□□□ -2.3
KRT3P12035 RPS29P24-201ENST00000486345 171 ntBASIC0.7□□□□□ -2.3
KRT3P12035 CYP3A137P-201ENST00000562436 69 ntBASIC0.7□□□□□ -2.3
KRT3P12035 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
KRT3P12035 AP000942.4-201ENST00000604811 241 ntBASIC0.7□□□□□ -2.3
KRT3P12035 SNORD38B-202ENST00000625943 69 ntBASIC0.7□□□□□ -2.3
KRT3P12035 AL442644.1-201ENST00000454390 3105 ntBASIC0.7□□□□□ -2.3
KRT3P12035 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
KRT3P12035 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
KRT3P12035 RNU6-888P-201ENST00000363010 101 ntBASIC0.69□□□□□ -2.3
KRT3P12035 Y_RNA.116-201ENST00000363292 103 ntBASIC0.69□□□□□ -2.3
KRT3P12035 Y_RNA.304-201ENST00000365011 112 ntBASIC0.69□□□□□ -2.3
KRT3P12035 RNU6-1189P-201ENST00000383958 107 ntBASIC0.69□□□□□ -2.3
KRT3P12035 MIR518E-201ENST00000385252 88 ntBASIC0.69□□□□□ -2.3
KRT3P12035 MIR616-201ENST00000385293 97 ntBASIC0.69□□□□□ -2.3
KRT3P12035 RNU6-913P-201ENST00000390913 95 ntBASIC0.69□□□□□ -2.3
KRT3P12035 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
KRT3P12035 RNA5SP222-201ENST00000411039 105 ntBASIC0.69□□□□□ -2.3
KRT3P12035 RNU7-62P-201ENST00000458856 62 ntBASIC0.69□□□□□ -2.3
KRT3P12035 RNU6-977P-201ENST00000516411 103 ntBASIC0.69□□□□□ -2.3
KRT3P12035 MIR4771-2-201ENST00000577758 74 ntBASIC0.69□□□□□ -2.3
KRT3P12035 MIR4771-1-201ENST00000582617 74 ntBASIC0.69□□□□□ -2.3
KRT3P12035 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
KRT3P12035 Y_RNA.82-201ENST00000363000 102 ntBASIC0.68□□□□□ -2.3
KRT3P12035 Y_RNA.92-201ENST00000363043 102 ntBASIC0.68□□□□□ -2.3
KRT3P12035 SNORD45.3-201ENST00000363836 72 ntBASIC0.68□□□□□ -2.3
KRT3P12035 SNORD27-201ENST00000363981 72 ntBASIC0.68□□□□□ -2.3
KRT3P12035 Y_RNA.235-201ENST00000364412 102 ntBASIC0.68□□□□□ -2.3
KRT3P12035 Y_RNA.262-201ENST00000364641 102 ntBASIC0.68□□□□□ -2.3
KRT3P12035 SNORA1.1-201ENST00000364671 133 ntBASIC0.68□□□□□ -2.3
KRT3P12035 Y_RNA.288-201ENST00000364854 92 ntBASIC0.68□□□□□ -2.3
KRT3P12035 Y_RNA.306-201ENST00000365015 102 ntBASIC0.68□□□□□ -2.3
KRT3P12035 Y_RNA.312-201ENST00000365089 102 ntBASIC0.68□□□□□ -2.3
KRT3P12035 Y_RNA.322-201ENST00000365151 102 ntBASIC0.68□□□□□ -2.3
KRT3P12035 SNORA36.2-201ENST00000384004 127 ntBASIC0.68□□□□□ -2.3
KRT3P12035 MIR520F-201ENST00000384824 87 ntBASIC0.68□□□□□ -2.3
KRT3P12035 MIR548A2-201ENST00000384956 97 ntBASIC0.68□□□□□ -2.3
KRT3P12035 SNORD105-201ENST00000386910 85 ntBASIC0.68□□□□□ -2.3
KRT3P12035 RNU2-38P-201ENST00000410856 79 ntBASIC0.68□□□□□ -2.3
KRT3P12035 SNORD2.1-201ENST00000458762 69 ntBASIC0.68□□□□□ -2.3
KRT3P12035 Y_RNA.650-201ENST00000459002 102 ntBASIC0.68□□□□□ -2.3
KRT3P12035 RNU2-11P-201ENST00000459191 187 ntBASIC0.68□□□□□ -2.3
KRT3P12035 AC113410.1-201ENST00000505029 247 ntBASIC0.68□□□□□ -2.3
KRT3P12035 Y_RNA.777-201ENST00000516982 102 ntBASIC0.68□□□□□ -2.3
KRT3P12035 MIR4452-201ENST00000583004 71 ntBASIC0.68□□□□□ -2.3
KRT3P12035 MIR4264-201ENST00000583520 66 ntBASIC0.68□□□□□ -2.3
KRT3P12035 Y_RNA.771-201ENST00000598668 102 ntBASIC0.68□□□□□ -2.3
KRT3P12035 AL360085.1-201ENST00000604713 532 ntBASIC0.68□□□□□ -2.3
KRT3P12035 Y_RNA.789-201ENST00000622480 102 ntBASIC0.68□□□□□ -2.3
KRT3P12035 Y_RNA.65-201ENST00000362846 100 ntBASIC0.67□□□□□ -2.3
KRT3P12035 RNY3P5-201ENST00000384127 102 ntBASIC0.67□□□□□ -2.3
KRT3P12035 Y_RNA.477-201ENST00000384352 108 ntBASIC0.67□□□□□ -2.3
KRT3P12035 Y_RNA.508-201ENST00000384502 114 ntBASIC0.67□□□□□ -2.3
KRT3P12035 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
KRT3P12035 RNU2-55P-201ENST00000411146 174 ntBASIC0.67□□□□□ -2.3
KRT3P12035 RPS29P1-201ENST00000465274 159 ntBASIC0.67□□□□□ -2.3
KRT3P12035 RNU6-561P-201ENST00000516222 102 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms