Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MIR624-201ENST00000385217 97 ntBASIC1.29□□□□□ -2.2
ZIC3O60481 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.29□□□□□ -2.2
ZIC3O60481 RNU7-41P-201ENST00000515917 61 ntBASIC1.29□□□□□ -2.2
ZIC3O60481 CYP3A52P-201ENST00000563326 91 ntBASIC1.29□□□□□ -2.2
ZIC3O60481 AC104465.1-201ENST00000611365 139 ntBASIC1.29□□□□□ -2.2
ZIC3O60481 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.29□□□□□ -2.2
ZIC3O60481 AC008133.2-201ENST00000624540 351 ntBASIC1.29□□□□□ -2.2
ZIC3O60481 MIR3658-201ENST00000636291 56 ntBASIC1.29□□□□□ -2.2
ZIC3O60481 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
ZIC3O60481 Y_RNA.4-201ENST00000362333 112 ntBASIC1.28□□□□□ -2.2
ZIC3O60481 RNU6-1082P-201ENST00000364574 107 ntBASIC1.28□□□□□ -2.2
ZIC3O60481 Y_RNA.464-201ENST00000384282 110 ntBASIC1.28□□□□□ -2.2
ZIC3O60481 RNU6-804P-201ENST00000384286 107 ntBASIC1.28□□□□□ -2.2
ZIC3O60481 Y_RNA.537-201ENST00000384626 109 ntBASIC1.28□□□□□ -2.2
ZIC3O60481 MIR570-201ENST00000384917 97 ntBASIC1.28□□□□□ -2.2
ZIC3O60481 RNA5SP127-201ENST00000411051 133 ntBASIC1.28□□□□□ -2.2
ZIC3O60481 RNU1-98P-201ENST00000458992 160 ntBASIC1.28□□□□□ -2.2
ZIC3O60481 RNU6-947P-201ENST00000516264 106 ntBASIC1.28□□□□□ -2.2
ZIC3O60481 AC090821.2-201ENST00000523552 176 ntBASIC1.28□□□□□ -2.2
ZIC3O60481 MIR3646-201ENST00000578301 84 ntBASIC1.28□□□□□ -2.2
ZIC3O60481 MIR3144-201ENST00000579460 79 ntBASIC1.28□□□□□ -2.2
ZIC3O60481 MIR5197-201ENST00000583721 112 ntBASIC1.28□□□□□ -2.2
ZIC3O60481 DNAJC19P2-201ENST00000593340 302 ntBASIC1.28□□□□□ -2.2
ZIC3O60481 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.28□□□□□ -2.21
ZIC3O60481 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.27□□□□□ -2.21
ZIC3O60481 RNU6-1130P-201ENST00000365434 107 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 SNORA24-201ENST00000384096 131 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 RNU6-209P-201ENST00000384118 107 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 SNORA27-201ENST00000384323 126 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.27□□□□□ -2.21
ZIC3O60481 RPL39P39-201ENST00000455840 151 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 AC107297.1-201ENST00000459991 176 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 RN7SKP88-201ENST00000516847 250 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 RNU6-1212P-201ENST00000517023 104 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 MIR4498-201ENST00000577599 66 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 snoU13.31-201ENST00000607291 104 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 MIR4791-201ENST00000607666 84 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 7SK.8-201ENST00000612110 250 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 7SK.11-201ENST00000615477 250 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 7SK.13-201ENST00000622040 250 ntBASIC1.27□□□□□ -2.21
ZIC3O60481 RNU6-1067P-201ENST00000384752 107 ntBASIC1.26□□□□□ -2.21
ZIC3O60481 SNORA75.5-201ENST00000391291 81 ntBASIC1.26□□□□□ -2.21
ZIC3O60481 RNU6-1054P-201ENST00000411293 104 ntBASIC1.26□□□□□ -2.21
ZIC3O60481 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.26□□□□□ -2.21
ZIC3O60481 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.26□□□□□ -2.21
ZIC3O60481 AP001485.1-201ENST00000604799 199 ntBASIC1.26□□□□□ -2.21
ZIC3O60481 AC243994.1-201ENST00000618627 109 ntBASIC1.26□□□□□ -2.21
ZIC3O60481 MIR6844-201ENST00000637122 62 ntBASIC1.26□□□□□ -2.21
ZIC3O60481 AL161722.3-201ENST00000605789 2983 ntBASIC1.26□□□□□ -2.21
ZIC3O60481 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
ZIC3O60481 RNU6-449P-201ENST00000383914 107 ntBASIC1.25□□□□□ -2.21
ZIC3O60481 Y_RNA.398-201ENST00000383952 99 ntBASIC1.25□□□□□ -2.21
ZIC3O60481 RPS29P24-201ENST00000486345 171 ntBASIC1.25□□□□□ -2.21
ZIC3O60481 AL133373.1-201ENST00000497098 94 ntBASIC1.25□□□□□ -2.21
ZIC3O60481 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.25□□□□□ -2.21
ZIC3O60481 AP003716.2-201ENST00000528260 108 ntBASIC1.25□□□□□ -2.21
ZIC3O60481 MIR4421-201ENST00000578133 69 ntBASIC1.25□□□□□ -2.21
ZIC3O60481 MTND1P7-201ENST00000632801 297 ntBASIC1.25□□□□□ -2.21
ZIC3O60481 AC021753.1-201ENST00000635724 168 ntBASIC1.25□□□□□ -2.21
ZIC3O60481 MIR4251-201ENST00000635819 61 ntBASIC1.25□□□□□ -2.21
ZIC3O60481 SNORA7.1-201ENST00000363750 139 ntBASIC1.24□□□□□ -2.21
ZIC3O60481 RNA5SP48-201ENST00000363969 126 ntBASIC1.24□□□□□ -2.21
ZIC3O60481 RNU6-818P-201ENST00000364837 108 ntBASIC1.24□□□□□ -2.21
ZIC3O60481 SNORD116-18-201ENST00000383961 92 ntBASIC1.24□□□□□ -2.21
ZIC3O60481 SNORA51.10-201ENST00000384418 136 ntBASIC1.24□□□□□ -2.21
ZIC3O60481 RNU6-588P-201ENST00000410281 105 ntBASIC1.24□□□□□ -2.21
ZIC3O60481 RNA5SP247-201ENST00000411181 105 ntBASIC1.24□□□□□ -2.21
ZIC3O60481 AC009474.2-201ENST00000451383 136 ntBASIC1.24□□□□□ -2.21
ZIC3O60481 RPS29P29-201ENST00000456396 171 ntBASIC1.24□□□□□ -2.21
ZIC3O60481 SCARNA15-202ENST00000516881 127 ntBASIC1.24□□□□□ -2.21
ZIC3O60481 RNU1-92P-201ENST00000517017 135 ntBASIC1.24□□□□□ -2.21
ZIC3O60481 Y_RNA.778-201ENST00000620203 90 ntBASIC1.24□□□□□ -2.21
ZIC3O60481 Y_RNA.8-201ENST00000362353 102 ntBASIC1.23□□□□□ -2.21
ZIC3O60481 RNY1P11-201ENST00000363759 113 ntBASIC1.23□□□□□ -2.21
ZIC3O60481 AC245047.7-201ENST00000440265 293 ntBASIC1.23□□□□□ -2.21
ZIC3O60481 RNU7-96P-201ENST00000459535 64 ntBASIC1.23□□□□□ -2.21
ZIC3O60481 AC048334.1-201ENST00000477975 159 ntBASIC1.23□□□□□ -2.21
ZIC3O60481 RNU6-998P-201ENST00000515894 101 ntBASIC1.23□□□□□ -2.21
ZIC3O60481 RNA5SP61-201ENST00000516453 100 ntBASIC1.23□□□□□ -2.21
ZIC3O60481 RNU6-255P-201ENST00000516957 105 ntBASIC1.23□□□□□ -2.21
ZIC3O60481 MTND5P41-201ENST00000517498 206 ntBASIC1.23□□□□□ -2.21
ZIC3O60481 MIR4781-201ENST00000585250 76 ntBASIC1.23□□□□□ -2.21
ZIC3O60481 PRELID3BP2-201ENST00000605362 201 ntBASIC1.23□□□□□ -2.21
ZIC3O60481 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
ZIC3O60481 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.22□□□□□ -2.21
ZIC3O60481 RNU6-151P-201ENST00000364158 107 ntBASIC1.22□□□□□ -2.21
ZIC3O60481 RNU4-11P-201ENST00000365287 132 ntBASIC1.22□□□□□ -2.21
ZIC3O60481 SNORA70.7-201ENST00000384159 133 ntBASIC1.22□□□□□ -2.21
ZIC3O60481 Y_RNA.497-201ENST00000384447 98 ntBASIC1.22□□□□□ -2.21
ZIC3O60481 SNORD37.2-201ENST00000391075 66 ntBASIC1.22□□□□□ -2.21
ZIC3O60481 RPS29P23-201ENST00000458635 123 ntBASIC1.22□□□□□ -2.21
ZIC3O60481 RNU7-67P-201ENST00000459003 62 ntBASIC1.22□□□□□ -2.21
ZIC3O60481 RNU6-1149P-201ENST00000516810 97 ntBASIC1.22□□□□□ -2.21
ZIC3O60481 RNU6-958P-201ENST00000516995 106 ntBASIC1.22□□□□□ -2.21
ZIC3O60481 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.22□□□□□ -2.21
ZIC3O60481 AC131055.1-201ENST00000584626 316 ntBASIC1.22□□□□□ -2.21
ZIC3O60481 MIR8065-201ENST00000620577 100 ntBASIC1.22□□□□□ -2.21
ZIC3O60481 MIR337-201ENST00000362281 93 ntBASIC1.21□□□□□ -2.22
ZIC3O60481 Y_RNA.52-201ENST00000362760 96 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 237.4 ms