Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AF228730.3-201ENST00000436691 102 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 SNORD123-201ENST00000459473 70 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.96□□□□□ -2.26
HDAC3O15379 SNORD111.1-201ENST00000516421 86 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 SNORA18.7-201ENST00000516910 131 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 RNU6-365P-201ENST00000517113 106 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 MIR3129-201ENST00000581095 76 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 AL513534.2-201ENST00000603836 250 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 AL096861.1-201ENST00000610899 123 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
HDAC3O15379 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.95□□□□□ -2.26
HDAC3O15379 RNA5SP327-201ENST00000362494 101 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 RNY1P10-201ENST00000363268 113 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 RNU1-124P-201ENST00000363861 145 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 RNU4-84P-201ENST00000364200 139 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 RNU6-1082P-201ENST00000364574 107 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 Y_RNA.270-201ENST00000364693 104 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 SNORD24-201ENST00000383884 75 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 SNORD38C-201ENST00000384381 69 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 Y_RNA.555-201ENST00000384673 110 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 AL451046.2-201ENST00000403074 277 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 AL133373.1-201ENST00000497098 94 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 RNU6-830P-201ENST00000516353 107 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 SNORD36C-201ENST00000516733 66 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 MIR378D2-201ENST00000580636 98 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 MIR548AR-201ENST00000582191 57 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 MIR4661-201ENST00000582720 75 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 MIR3192-201ENST00000584920 77 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.95□□□□□ -2.26
HDAC3O15379 Y_RNA.8-201ENST00000362353 102 ntBASIC0.94□□□□□ -2.26
HDAC3O15379 Y_RNA.37-201ENST00000362606 108 ntBASIC0.94□□□□□ -2.26
HDAC3O15379 Y_RNA.272-201ENST00000364696 102 ntBASIC0.94□□□□□ -2.26
HDAC3O15379 RNU6-209P-201ENST00000384118 107 ntBASIC0.94□□□□□ -2.26
HDAC3O15379 SNORD77.3-201ENST00000391113 65 ntBASIC0.94□□□□□ -2.26
HDAC3O15379 U8.17-201ENST00000391292 132 ntBASIC0.94□□□□□ -2.26
HDAC3O15379 RNU6-394P-201ENST00000410735 107 ntBASIC0.94□□□□□ -2.26
HDAC3O15379 POLR2J4-204ENST00000418424 324 ntBASIC0.94□□□□□ -2.26
HDAC3O15379 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
HDAC3O15379 RNU7-41P-201ENST00000515917 61 ntBASIC0.94□□□□□ -2.26
HDAC3O15379 RNU6-504P-201ENST00000516568 104 ntBASIC0.94□□□□□ -2.26
HDAC3O15379 SNORA74.3-201ENST00000517108 154 ntBASIC0.94□□□□□ -2.26
HDAC3O15379 MTND5P41-201ENST00000517498 206 ntBASIC0.94□□□□□ -2.26
HDAC3O15379 AC021753.1-201ENST00000635724 168 ntBASIC0.94□□□□□ -2.26
HDAC3O15379 MIR337-201ENST00000362281 93 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 Y_RNA.180-201ENST00000363867 113 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 SNORD115-28-201ENST00000363931 81 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 Y_RNA.398-201ENST00000383952 99 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 SNORA79-201ENST00000408376 140 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.93□□□□□ -2.26
HDAC3O15379 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.93□□□□□ -2.26
HDAC3O15379 AC087343.1-201ENST00000477341 475 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 AC107027.2-201ENST00000512197 115 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 RNU6-322P-201ENST00000516010 103 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 RNU7-121P-201ENST00000516604 62 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 RN7SKP88-201ENST00000516847 250 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 RNU6-255P-201ENST00000516957 105 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 GHRLOS.1-201ENST00000610995 70 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 7SK.8-201ENST00000612110 250 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 7SK.11-201ENST00000615477 250 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 7SK.13-201ENST00000622040 250 ntBASIC0.93□□□□□ -2.26
HDAC3O15379 Y_RNA.521-201ENST00000384560 114 ntBASIC0.92□□□□□ -2.26
HDAC3O15379 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.92□□□□□ -2.26
HDAC3O15379 RNU6-239P-201ENST00000390990 99 ntBASIC0.92□□□□□ -2.26
HDAC3O15379 SNORA26-201ENST00000391286 122 ntBASIC0.92□□□□□ -2.26
HDAC3O15379 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.92□□□□□ -2.26
HDAC3O15379 RPS26P48-201ENST00000491713 339 ntBASIC0.92□□□□□ -2.26
HDAC3O15379 SNORA18.4-201ENST00000516440 124 ntBASIC0.92□□□□□ -2.26
HDAC3O15379 SNORD116-25-201ENST00000516517 92 ntBASIC0.92□□□□□ -2.26
HDAC3O15379 RNU6-126P-201ENST00000516685 103 ntBASIC0.92□□□□□ -2.26
HDAC3O15379 MIR3144-201ENST00000579460 79 ntBASIC0.92□□□□□ -2.26
HDAC3O15379 AL365205.2-201ENST00000594586 68 ntBASIC0.92□□□□□ -2.26
HDAC3O15379 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.92□□□□□ -2.26
HDAC3O15379 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.92□□□□□ -2.26
HDAC3O15379 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.91□□□□□ -2.26
HDAC3O15379 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.91□□□□□ -2.26
HDAC3O15379 Y_RNA.242-201ENST00000364473 110 ntBASIC0.91□□□□□ -2.26
HDAC3O15379 Y_RNA.357-201ENST00000365487 109 ntBASIC0.91□□□□□ -2.26
HDAC3O15379 Y_RNA.363-201ENST00000365529 113 ntBASIC0.91□□□□□ -2.26
HDAC3O15379 Y_RNA.393-201ENST00000383936 102 ntBASIC0.91□□□□□ -2.26
HDAC3O15379 SNORD116-18-201ENST00000383961 92 ntBASIC0.91□□□□□ -2.26
HDAC3O15379 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
HDAC3O15379 AC048334.1-201ENST00000477975 159 ntBASIC0.91□□□□□ -2.26
HDAC3O15379 SNORA31.4-201ENST00000516049 129 ntBASIC0.91□□□□□ -2.26
HDAC3O15379 RNU6-947P-201ENST00000516264 106 ntBASIC0.91□□□□□ -2.26
HDAC3O15379 AP003484.1-201ENST00000530974 250 ntBASIC0.91□□□□□ -2.26
HDAC3O15379 MIR4764-201ENST00000580680 88 ntBASIC0.91□□□□□ -2.26
HDAC3O15379 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.91□□□□□ -2.26
HDAC3O15379 MTND5P32-201ENST00000560711 1802 ntBASIC0.91□□□□□ -2.26
HDAC3O15379 Y_RNA.170-201ENST00000363746 110 ntBASIC0.9□□□□□ -2.27
HDAC3O15379 Y_RNA.241-201ENST00000364470 117 ntBASIC0.9□□□□□ -2.27
HDAC3O15379 Y_RNA.337-201ENST00000365312 102 ntBASIC0.9□□□□□ -2.27
HDAC3O15379 RNU6-597P-201ENST00000365620 102 ntBASIC0.9□□□□□ -2.27
HDAC3O15379 MIR520C-201ENST00000385005 87 ntBASIC0.9□□□□□ -2.27
HDAC3O15379 RNU6-588P-201ENST00000410281 105 ntBASIC0.9□□□□□ -2.27
HDAC3O15379 RNU2-13P-201ENST00000515909 113 ntBASIC0.9□□□□□ -2.27
HDAC3O15379 SNORA31.2-201ENST00000516019 134 ntBASIC0.9□□□□□ -2.27
HDAC3O15379 AC134878.1-201ENST00000619901 243 ntBASIC0.9□□□□□ -2.27
HDAC3O15379 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms