Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RNU6-111P-201ENST00000517179 105 ntBASIC1.03□□□□□ -2.24
TO15178 AP003484.1-201ENST00000530974 250 ntBASIC1.03□□□□□ -2.24
TO15178 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.03□□□□□ -2.24
TO15178 AC008163.1-202ENST00000636004 2889 ntBASIC1.03□□□□□ -2.24
TO15178 Y_RNA.121-201ENST00000363309 113 ntBASIC1.02□□□□□ -2.25
TO15178 RNY1-201ENST00000364228 113 ntBASIC1.02□□□□□ -2.25
TO15178 Y_RNA.330-201ENST00000365230 109 ntBASIC1.02□□□□□ -2.25
TO15178 RNU6-53P-201ENST00000365367 106 ntBASIC1.02□□□□□ -2.25
TO15178 Y_RNA.410-201ENST00000383992 113 ntBASIC1.02□□□□□ -2.25
TO15178 snosnR66.1-201ENST00000391095 99 ntBASIC1.02□□□□□ -2.25
TO15178 Y_RNA.618-201ENST00000410949 107 ntBASIC1.02□□□□□ -2.25
TO15178 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.02□□□□□ -2.25
TO15178 RPS29P28-201ENST00000446439 141 ntBASIC1.02□□□□□ -2.25
TO15178 AL121914.1-201ENST00000450188 156 ntBASIC1.02□□□□□ -2.25
TO15178 RNU7-67P-201ENST00000459003 62 ntBASIC1.02□□□□□ -2.25
TO15178 RPS23P4-201ENST00000487908 423 ntBASIC1.02□□□□□ -2.25
TO15178 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
TO15178 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.02□□□□□ -2.25
TO15178 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.02□□□□□ -2.25
TO15178 MTND1P7-201ENST00000632801 297 ntBASIC1.02□□□□□ -2.25
TO15178 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
TO15178 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
TO15178 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
TO15178 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
TO15178 SNORA25.9-201ENST00000365087 128 ntBASIC1.01□□□□□ -2.25
TO15178 Y_RNA.401-201ENST00000383965 117 ntBASIC1.01□□□□□ -2.25
TO15178 RNU6-578P-201ENST00000390980 103 ntBASIC1.01□□□□□ -2.25
TO15178 RNU4-43P-201ENST00000410628 137 ntBASIC1.01□□□□□ -2.25
TO15178 AL392103.1-201ENST00000447000 198 ntBASIC1.01□□□□□ -2.25
TO15178 snoU13.16-201ENST00000459350 104 ntBASIC1.01□□□□□ -2.25
TO15178 Y_RNA.797-201ENST00000515977 94 ntBASIC1.01□□□□□ -2.25
TO15178 RNU6-561P-201ENST00000516222 102 ntBASIC1.01□□□□□ -2.25
TO15178 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
TO15178 AP000942.4-201ENST00000604811 241 ntBASIC1.01□□□□□ -2.25
TO15178 AL391516.1-201ENST00000554380 2449 ntBASIC1□□□□□ -2.25
TO15178 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1□□□□□ -2.25
TO15178 RNU6-923P-201ENST00000364753 107 ntBASIC1□□□□□ -2.25
TO15178 RNU6-396P-201ENST00000365369 105 ntBASIC1□□□□□ -2.25
TO15178 SNORA24-201ENST00000384096 131 ntBASIC1□□□□□ -2.25
TO15178 SNORA27-201ENST00000384323 126 ntBASIC1□□□□□ -2.25
TO15178 RNU4-70P-201ENST00000384579 139 ntBASIC1□□□□□ -2.25
TO15178 MIR200A-201ENST00000384875 90 ntBASIC1□□□□□ -2.25
TO15178 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1□□□□□ -2.25
TO15178 RNU6-938P-201ENST00000411285 103 ntBASIC1□□□□□ -2.25
TO15178 AF228730.3-201ENST00000436691 102 ntBASIC1□□□□□ -2.25
TO15178 SNORA18.4-201ENST00000516440 124 ntBASIC1□□□□□ -2.25
TO15178 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1□□□□□ -2.25
TO15178 MIR548AO-201ENST00000579992 96 ntBASIC1□□□□□ -2.25
TO15178 MIR4661-201ENST00000582720 75 ntBASIC1□□□□□ -2.25
TO15178 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
TO15178 RNU2-4P-201ENST00000606190 192 ntBASIC1□□□□□ -2.25
TO15178 Y_RNA.200-201ENST00000364018 102 ntBASIC0.99□□□□□ -2.25
TO15178 RNU6-1189P-201ENST00000383958 107 ntBASIC0.99□□□□□ -2.25
TO15178 Y_RNA.494-201ENST00000384432 111 ntBASIC0.99□□□□□ -2.25
TO15178 Y_RNA.508-201ENST00000384502 114 ntBASIC0.99□□□□□ -2.25
TO15178 MIR1302-7-201ENST00000408841 72 ntBASIC0.99□□□□□ -2.25
TO15178 MIR2115-201ENST00000516657 100 ntBASIC0.99□□□□□ -2.25
TO15178 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
TO15178 AC108706.1-201ENST00000611053 297 ntBASIC0.99□□□□□ -2.25
TO15178 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
TO15178 Y_RNA.224-201ENST00000364308 111 ntBASIC0.98□□□□□ -2.25
TO15178 SNORD114-24-201ENST00000365029 72 ntBASIC0.98□□□□□ -2.25
TO15178 Y_RNA.571-201ENST00000384753 98 ntBASIC0.98□□□□□ -2.25
TO15178 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
TO15178 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.98□□□□□ -2.25
TO15178 RNU7-53P-201ENST00000516705 60 ntBASIC0.98□□□□□ -2.25
TO15178 SNORD36C-201ENST00000516733 66 ntBASIC0.98□□□□□ -2.25
TO15178 RNU6-958P-201ENST00000516995 106 ntBASIC0.98□□□□□ -2.25
TO15178 MIR4308-201ENST00000580634 81 ntBASIC0.98□□□□□ -2.25
TO15178 Y_RNA.23-201ENST00000362496 106 ntBASIC0.97□□□□□ -2.25
TO15178 Y_RNA.83-201ENST00000363005 113 ntBASIC0.97□□□□□ -2.25
TO15178 Y_RNA.188-201ENST00000363952 111 ntBASIC0.97□□□□□ -2.25
TO15178 Y_RNA.542-201ENST00000384641 111 ntBASIC0.97□□□□□ -2.25
TO15178 MIR499A-201ENST00000384903 122 ntBASIC0.97□□□□□ -2.25
TO15178 RNU7-73P-201ENST00000458743 63 ntBASIC0.97□□□□□ -2.25
TO15178 RPS29P24-201ENST00000486345 171 ntBASIC0.97□□□□□ -2.25
TO15178 MIR378D2-201ENST00000580636 98 ntBASIC0.97□□□□□ -2.25
TO15178 Z83818.1-201ENST00000603584 150 ntBASIC0.97□□□□□ -2.25
TO15178 MIR6516-201ENST00000630554 81 ntBASIC0.97□□□□□ -2.25
TO15178 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.97□□□□□ -2.25
TO15178 MIR411-201ENST00000362239 96 ntBASIC0.96□□□□□ -2.26
TO15178 Y_RNA.182-201ENST00000363880 111 ntBASIC0.96□□□□□ -2.26
TO15178 SNORA1-201ENST00000384107 130 ntBASIC0.96□□□□□ -2.26
TO15178 RNU6-613P-201ENST00000410412 108 ntBASIC0.96□□□□□ -2.26
TO15178 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.96□□□□□ -2.26
TO15178 AL035398.1-201ENST00000430869 322 ntBASIC0.96□□□□□ -2.26
TO15178 RNU7-96P-201ENST00000459535 64 ntBASIC0.96□□□□□ -2.26
TO15178 SNORD116-25-201ENST00000516517 92 ntBASIC0.96□□□□□ -2.26
TO15178 RNU6-1271P-201ENST00000517049 105 ntBASIC0.96□□□□□ -2.26
TO15178 AC131055.1-201ENST00000584626 316 ntBASIC0.96□□□□□ -2.26
TO15178 AL078603.1-201ENST00000603824 313 ntBASIC0.96□□□□□ -2.26
TO15178 AC009779.6-201ENST00000603972 165 ntBASIC0.96□□□□□ -2.26
TO15178 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
TO15178 AC091895.1-201ENST00000624494 256 ntBASIC0.96□□□□□ -2.26
TO15178 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
TO15178 RNU6-1292P-201ENST00000383856 107 ntBASIC0.95□□□□□ -2.26
TO15178 Y_RNA.440-201ENST00000384120 114 ntBASIC0.95□□□□□ -2.26
TO15178 MT-TG-201ENST00000387429 68 ntBASIC0.95□□□□□ -2.26
TO15178 SNORD77.3-201ENST00000391113 65 ntBASIC0.95□□□□□ -2.26
TO15178 SNORD111-201ENST00000408139 94 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 252.5 ms