Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 SNORA2A-201ENST00000383885 135 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 SNORD93-201ENST00000408813 74 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.24□□□□□ -2.45
LSM1O15116 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 RNU6-693P-201ENST00000516134 107 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 SNORA40.14-201ENST00000516543 86 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 SNORA31.14-201ENST00000516728 116 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 RNU6-135P-201ENST00000516769 101 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 RNA5SP330-201ENST00000517096 96 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.24□□□□□ -2.45
LSM1O15116 AL049861.1-201ENST00000603130 150 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 SNORD113-5-201ENST00000607261 78 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 AP001282.2-201ENST00000616149 309 ntBASIC-0.24□□□□□ -2.45
LSM1O15116 RNU6-888P-201ENST00000363010 101 ntBASIC-0.25□□□□□ -2.45
LSM1O15116 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.25□□□□□ -2.45
LSM1O15116 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.25□□□□□ -2.45
LSM1O15116 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.25□□□□□ -2.45
LSM1O15116 SNORD61-201ENST00000384252 73 ntBASIC-0.25□□□□□ -2.45
LSM1O15116 MIR145-201ENST00000384967 88 ntBASIC-0.25□□□□□ -2.45
LSM1O15116 AC096949.1-201ENST00000412047 152 ntBASIC-0.25□□□□□ -2.45
LSM1O15116 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.25□□□□□ -2.45
LSM1O15116 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.25□□□□□ -2.45
LSM1O15116 SEPT14P8-201ENST00000508026 178 ntBASIC-0.25□□□□□ -2.45
LSM1O15116 RNU6-764P-201ENST00000516396 105 ntBASIC-0.25□□□□□ -2.45
LSM1O15116 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.25□□□□□ -2.45
LSM1O15116 SNORD116.3-201ENST00000517176 78 ntBASIC-0.25□□□□□ -2.45
LSM1O15116 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 RNY4P36-201ENST00000391116 96 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 RNU6-130P-201ENST00000411112 103 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 SUMO1P3-201ENST00000439961 304 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 RNU2-11P-201ENST00000459191 187 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 U8.20-201ENST00000459445 131 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 RNU6-765P-201ENST00000516916 99 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 C8orf59P2-201ENST00000603441 271 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 RNU1-29P-201ENST00000606574 126 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 MIR6082-201ENST00000613604 109 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 AC013791.1-201ENST00000616619 62 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 AL662814.1-201ENST00000617364 121 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 AC091304.10-201ENST00000641554 121 ntBASIC-0.26□□□□□ -2.45
LSM1O15116 SNORD28-201ENST00000384706 75 ntBASIC-0.27□□□□□ -2.45
LSM1O15116 MT-TL1-201ENST00000386347 75 ntBASIC-0.27□□□□□ -2.45
LSM1O15116 RNU7-152P-201ENST00000458982 64 ntBASIC-0.27□□□□□ -2.45
LSM1O15116 MTCO2P24-201ENST00000515611 426 ntBASIC-0.27□□□□□ -2.45
LSM1O15116 SNORD58B-201ENST00000607313 66 ntBASIC-0.27□□□□□ -2.45
LSM1O15116 AL138825.1-201ENST00000618587 192 ntBASIC-0.27□□□□□ -2.45
LSM1O15116 MIR6717-201ENST00000622747 73 ntBASIC-0.27□□□□□ -2.45
LSM1O15116 MTND4LP32-201ENST00000636111 270 ntBASIC-0.27□□□□□ -2.45
LSM1O15116 RNA5SP128-201ENST00000365305 116 ntBASIC-0.28□□□□□ -2.45
LSM1O15116 RNU1-115P-201ENST00000365329 160 ntBASIC-0.28□□□□□ -2.45
LSM1O15116 RNA5SP127-201ENST00000411051 133 ntBASIC-0.28□□□□□ -2.45
LSM1O15116 MTND1P14-201ENST00000427400 950 ntBASIC-0.28□□□□□ -2.45
LSM1O15116 RNA5SP480-201ENST00000516840 109 ntBASIC-0.28□□□□□ -2.45
LSM1O15116 RPS29P30-201ENST00000600975 111 ntBASIC-0.28□□□□□ -2.45
LSM1O15116 PART1_1.1-201ENST00000611761 217 ntBASIC-0.28□□□□□ -2.45
LSM1O15116 RNU6-302P-201ENST00000365249 107 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 MIR760-201ENST00000390220 80 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 U8.15-201ENST00000390947 134 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 SNORA26-201ENST00000391286 122 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.29□□□□□ -2.46
LSM1O15116 AF228730.3-201ENST00000436691 102 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 AL138752.1-201ENST00000452964 351 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 RNU6-277P-201ENST00000516272 106 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 RNU6-782P-201ENST00000516852 104 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 MIR4639-201ENST00000584938 69 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 AC092447.9-201ENST00000603395 144 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 AC104985.2-201ENST00000620598 500 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 AL606534.2-204ENST00000635008 178 ntBASIC-0.29□□□□□ -2.46
LSM1O15116 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.29□□□□□ -2.46
LSM1O15116 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.3□□□□□ -2.46
LSM1O15116 RNU6-161P-201ENST00000363051 106 ntBASIC-0.3□□□□□ -2.46
LSM1O15116 RNU6-756P-201ENST00000383997 107 ntBASIC-0.3□□□□□ -2.46
LSM1O15116 MIR643-201ENST00000385267 97 ntBASIC-0.3□□□□□ -2.46
LSM1O15116 RNU6-126P-201ENST00000516685 103 ntBASIC-0.3□□□□□ -2.46
LSM1O15116 AP003733.2-201ENST00000529409 171 ntBASIC-0.3□□□□□ -2.46
LSM1O15116 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.31□□□□□ -2.46
LSM1O15116 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.31□□□□□ -2.46
LSM1O15116 RNU6-653P-201ENST00000363074 106 ntBASIC-0.31□□□□□ -2.46
LSM1O15116 RNA5SP325-201ENST00000363756 130 ntBASIC-0.31□□□□□ -2.46
LSM1O15116 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.31□□□□□ -2.46
LSM1O15116 RNU6-291P-201ENST00000384720 107 ntBASIC-0.31□□□□□ -2.46
LSM1O15116 MIR593-201ENST00000384856 100 ntBASIC-0.31□□□□□ -2.46
LSM1O15116 RNU6-397P-201ENST00000516226 104 ntBASIC-0.31□□□□□ -2.46
LSM1O15116 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.31□□□□□ -2.46
LSM1O15116 AC100767.1-201ENST00000528178 123 ntBASIC-0.31□□□□□ -2.46
LSM1O15116 MIR5692C2-201ENST00000577959 77 ntBASIC-0.31□□□□□ -2.46
LSM1O15116 MIR4491-201ENST00000581087 68 ntBASIC-0.31□□□□□ -2.46
LSM1O15116 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.31□□□□□ -2.46
LSM1O15116 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
LSM1O15116 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.32□□□□□ -2.46
LSM1O15116 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.32□□□□□ -2.46
LSM1O15116 RNU6-597P-201ENST00000365620 102 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms