Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 SNORD77.3-201ENST00000391113 65 ntBASIC-0.31□□□□□ -2.46
TRAV41A0A0B4J266 MIR548F1-201ENST00000408667 84 ntBASIC-0.31□□□□□ -2.46
TRAV41A0A0B4J266 AL160004.2-201ENST00000432935 350 ntBASIC-0.31□□□□□ -2.46
TRAV41A0A0B4J266 RNU7-165P-201ENST00000458864 60 ntBASIC-0.31□□□□□ -2.46
TRAV41A0A0B4J266 RNU7-45P-201ENST00000459460 63 ntBASIC-0.31□□□□□ -2.46
TRAV41A0A0B4J266 TRBVB-201ENST00000477100 408 ntBASIC-0.31□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-693P-201ENST00000516134 107 ntBASIC-0.31□□□□□ -2.46
TRAV41A0A0B4J266 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.31□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-135P-201ENST00000516769 101 ntBASIC-0.31□□□□□ -2.46
TRAV41A0A0B4J266 AC138869.1-201ENST00000568623 124 ntBASIC-0.31□□□□□ -2.46
TRAV41A0A0B4J266 AL133255.1-201ENST00000606374 441 ntBASIC-0.31□□□□□ -2.46
TRAV41A0A0B4J266 U4.5-201ENST00000617137 123 ntBASIC-0.31□□□□□ -2.46
TRAV41A0A0B4J266 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.32□□□□□ -2.46
TRAV41A0A0B4J266 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.32□□□□□ -2.46
TRAV41A0A0B4J266 SNORD61-201ENST00000384252 73 ntBASIC-0.32□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-937P-201ENST00000384325 106 ntBASIC-0.32□□□□□ -2.46
TRAV41A0A0B4J266 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.32□□□□□ -2.46
TRAV41A0A0B4J266 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.32□□□□□ -2.46
TRAV41A0A0B4J266 RNU7-96P-201ENST00000459535 64 ntBASIC-0.32□□□□□ -2.46
TRAV41A0A0B4J266 SNORD77.4-201ENST00000516158 81 ntBASIC-0.32□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-718P-201ENST00000516166 105 ntBASIC-0.32□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-720P-201ENST00000516363 108 ntBASIC-0.32□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-765P-201ENST00000516916 99 ntBASIC-0.32□□□□□ -2.46
TRAV41A0A0B4J266 MIR4491-201ENST00000581087 68 ntBASIC-0.32□□□□□ -2.46
TRAV41A0A0B4J266 MIR6717-201ENST00000622747 73 ntBASIC-0.32□□□□□ -2.46
TRAV41A0A0B4J266 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 MIR329-2-201ENST00000385029 84 ntBASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-763P-201ENST00000390865 106 ntBASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-269P-201ENST00000391077 97 ntBASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 MIR892B-201ENST00000401279 77 ntBASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 MTND1P34-201ENST00000438556 671 ntBASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-191P-201ENST00000516295 94 ntBASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 VN1R91P-201ENST00000594377 169 ntBASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 AC002553.4-201ENST00000616896 331 ntBASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 MIR4272-201ENST00000635924 64 ntBASIC-0.33□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-899P-201ENST00000363947 107 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 SNORA72.6-201ENST00000384520 129 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-535P-201ENST00000384722 107 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 MIR215-201ENST00000384858 110 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 MIR214-201ENST00000385214 110 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 MIR1277-201ENST00000408536 78 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 RNA5SP163-201ENST00000410304 99 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 AF228730.3-201ENST00000436691 102 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 RPL39P25-201ENST00000449384 154 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 AC023449.1-201ENST00000454464 154 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 AC104692.1-201ENST00000472406 90 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-699P-201ENST00000517081 110 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 SNORA70.25-201ENST00000612741 95 ntBASIC-0.34□□□□□ -2.46
TRAV41A0A0B4J266 RNU6-888P-201ENST00000363010 101 ntBASIC-0.35□□□□□ -2.47
TRAV41A0A0B4J266 RNA5SP245-201ENST00000364239 121 ntBASIC-0.35□□□□□ -2.47
TRAV41A0A0B4J266 SNORD24-201ENST00000383884 75 ntBASIC-0.35□□□□□ -2.47
TRAV41A0A0B4J266 SNORD63-201ENST00000384262 68 ntBASIC-0.35□□□□□ -2.47
TRAV41A0A0B4J266 RNA5SP237-201ENST00000410414 113 ntBASIC-0.35□□□□□ -2.47
TRAV41A0A0B4J266 PDCL2P1-201ENST00000419302 352 ntBASIC-0.35□□□□□ -2.47
TRAV41A0A0B4J266 AC108059.2-201ENST00000434626 151 ntBASIC-0.35□□□□□ -2.47
TRAV41A0A0B4J266 AC099799.1-201ENST00000439809 192 ntBASIC-0.35□□□□□ -2.47
TRAV41A0A0B4J266 SNORD4A-201ENST00000459174 72 ntBASIC-0.35□□□□□ -2.47
TRAV41A0A0B4J266 SNORA25.16-201ENST00000516741 121 ntBASIC-0.35□□□□□ -2.47
TRAV41A0A0B4J266 AC141846.1-201ENST00000568348 142 ntBASIC-0.35□□□□□ -2.47
TRAV41A0A0B4J266 MIR5690-201ENST00000583739 73 ntBASIC-0.35□□□□□ -2.47
TRAV41A0A0B4J266 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
TRAV41A0A0B4J266 MIR342-201ENST00000362212 99 ntBASIC-0.36□□□□□ -2.47
TRAV41A0A0B4J266 RNU6-653P-201ENST00000363074 106 ntBASIC-0.36□□□□□ -2.47
TRAV41A0A0B4J266 RNU6-144P-201ENST00000383951 107 ntBASIC-0.36□□□□□ -2.47
TRAV41A0A0B4J266 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.36□□□□□ -2.47
TRAV41A0A0B4J266 RNU6-21P-201ENST00000384710 107 ntBASIC-0.36□□□□□ -2.47
TRAV41A0A0B4J266 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.36□□□□□ -2.47
TRAV41A0A0B4J266 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.36□□□□□ -2.47
TRAV41A0A0B4J266 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.36□□□□□ -2.47
TRAV41A0A0B4J266 MIR548AD-201ENST00000584780 82 ntBASIC-0.36□□□□□ -2.47
TRAV41A0A0B4J266 AL670379.3-201ENST00000605040 251 ntBASIC-0.36□□□□□ -2.47
TRAV41A0A0B4J266 AC084782.3-201ENST00000612282 578 ntBASIC-0.36□□□□□ -2.47
TRAV41A0A0B4J266 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.36□□□□□ -2.47
TRAV41A0A0B4J266 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.36□□□□□ -2.47
TRAV41A0A0B4J266 RNU6-490P-201ENST00000362985 107 ntBASIC-0.37□□□□□ -2.47
TRAV41A0A0B4J266 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.37□□□□□ -2.47
TRAV41A0A0B4J266 AC016907.1-201ENST00000419483 435 ntBASIC-0.37□□□□□ -2.47
TRAV41A0A0B4J266 MTND1P14-201ENST00000427400 950 ntBASIC-0.37□□□□□ -2.47
TRAV41A0A0B4J266 AL589823.1-201ENST00000429577 183 ntBASIC-0.37□□□□□ -2.47
TRAV41A0A0B4J266 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.37□□□□□ -2.47
TRAV41A0A0B4J266 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.37□□□□□ -2.47
TRAV41A0A0B4J266 RNU6-397P-201ENST00000516226 104 ntBASIC-0.37□□□□□ -2.47
TRAV41A0A0B4J266 RNU6-764P-201ENST00000516396 105 ntBASIC-0.37□□□□□ -2.47
TRAV41A0A0B4J266 RNU6-358P-201ENST00000516564 75 ntBASIC-0.37□□□□□ -2.47
TRAV41A0A0B4J266 AC100767.1-201ENST00000528178 123 ntBASIC-0.37□□□□□ -2.47
TRAV41A0A0B4J266 MIR4662B-201ENST00000579498 81 ntBASIC-0.37□□□□□ -2.47
TRAV41A0A0B4J266 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.37□□□□□ -2.47
TRAV41A0A0B4J266 MIR376A2-201ENST00000636782 80 ntBASIC-0.37□□□□□ -2.47
TRAV41A0A0B4J266 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.38□□□□□ -2.47
TRAV41A0A0B4J266 SNORA63.5-201ENST00000363548 123 ntBASIC-0.38□□□□□ -2.47
TRAV41A0A0B4J266 RNY3-201ENST00000365484 102 ntBASIC-0.38□□□□□ -2.47
TRAV41A0A0B4J266 RNU6-652P-201ENST00000365488 107 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms