Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SNORA18.7-201ENST00000516910 131 ntBASIC1.23□□□□□ -2.21
SIX2Q9NPC8 SNORA74.3-201ENST00000517108 154 ntBASIC1.23□□□□□ -2.21
SIX2Q9NPC8 MIR378D2-201ENST00000580636 98 ntBASIC1.23□□□□□ -2.21
SIX2Q9NPC8 MIR4769-201ENST00000584126 77 ntBASIC1.23□□□□□ -2.21
SIX2Q9NPC8 AC098479.1-201ENST00000609225 154 ntBASIC1.23□□□□□ -2.21
SIX2Q9NPC8 GHRLOS.1-201ENST00000610995 70 ntBASIC1.23□□□□□ -2.21
SIX2Q9NPC8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
SIX2Q9NPC8 SNORD115-28-201ENST00000363931 81 ntBASIC1.22□□□□□ -2.21
SIX2Q9NPC8 RNU6-978P-201ENST00000364371 103 ntBASIC1.22□□□□□ -2.21
SIX2Q9NPC8 AC006461.1-201ENST00000412637 326 ntBASIC1.22□□□□□ -2.21
SIX2Q9NPC8 AC005840.1-201ENST00000498412 377 ntBASIC1.22□□□□□ -2.21
SIX2Q9NPC8 AC074198.2-201ENST00000508153 258 ntBASIC1.22□□□□□ -2.21
SIX2Q9NPC8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.22□□□□□ -2.21
SIX2Q9NPC8 AP000942.3-201ENST00000603702 160 ntBASIC1.22□□□□□ -2.21
SIX2Q9NPC8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SIX2Q9NPC8 Y_RNA.441-201ENST00000384123 112 ntBASIC1.21□□□□□ -2.22
SIX2Q9NPC8 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SIX2Q9NPC8 U8.17-201ENST00000391292 132 ntBASIC1.21□□□□□ -2.22
SIX2Q9NPC8 PCNPP3-201ENST00000393579 471 ntBASIC1.21□□□□□ -2.22
SIX2Q9NPC8 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
SIX2Q9NPC8 RPL30P7-201ENST00000479312 323 ntBASIC1.21□□□□□ -2.22
SIX2Q9NPC8 AC107027.2-201ENST00000512197 115 ntBASIC1.21□□□□□ -2.22
SIX2Q9NPC8 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
SIX2Q9NPC8 SNORD111.1-201ENST00000516421 86 ntBASIC1.21□□□□□ -2.22
SIX2Q9NPC8 SNORD116-25-201ENST00000516517 92 ntBASIC1.21□□□□□ -2.22
SIX2Q9NPC8 RNU6-902P-201ENST00000517212 91 ntBASIC1.21□□□□□ -2.22
SIX2Q9NPC8 RNU7-181P-201ENST00000517234 74 ntBASIC1.21□□□□□ -2.22
SIX2Q9NPC8 AL512310.8-201ENST00000550183 120 ntBASIC1.21□□□□□ -2.22
SIX2Q9NPC8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.21□□□□□ -2.22
SIX2Q9NPC8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SIX2Q9NPC8 Y_RNA.150-201ENST00000363562 102 ntBASIC1.2□□□□□ -2.22
SIX2Q9NPC8 RNU4-84P-201ENST00000364200 139 ntBASIC1.2□□□□□ -2.22
SIX2Q9NPC8 Y_RNA.270-201ENST00000364693 104 ntBASIC1.2□□□□□ -2.22
SIX2Q9NPC8 SNORA1-201ENST00000384107 130 ntBASIC1.2□□□□□ -2.22
SIX2Q9NPC8 SNORD28B-201ENST00000390993 75 ntBASIC1.2□□□□□ -2.22
SIX2Q9NPC8 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.2□□□□□ -2.22
SIX2Q9NPC8 RNU7-43P-201ENST00000516554 64 ntBASIC1.2□□□□□ -2.22
SIX2Q9NPC8 MIR3664-201ENST00000579074 99 ntBASIC1.2□□□□□ -2.22
SIX2Q9NPC8 MIR548AR-201ENST00000582191 57 ntBASIC1.2□□□□□ -2.22
SIX2Q9NPC8 AL365205.2-201ENST00000594586 68 ntBASIC1.2□□□□□ -2.22
SIX2Q9NPC8 AL357312.1-201ENST00000603879 298 ntBASIC1.2□□□□□ -2.22
SIX2Q9NPC8 AC134878.1-201ENST00000619901 243 ntBASIC1.2□□□□□ -2.22
SIX2Q9NPC8 MIR378A-201ENST00000362177 66 ntBASIC1.19□□□□□ -2.22
SIX2Q9NPC8 Y_RNA.37-201ENST00000362606 108 ntBASIC1.19□□□□□ -2.22
SIX2Q9NPC8 Y_RNA.357-201ENST00000365487 109 ntBASIC1.19□□□□□ -2.22
SIX2Q9NPC8 RNU6-886P-201ENST00000384319 105 ntBASIC1.19□□□□□ -2.22
SIX2Q9NPC8 Y_RNA.542-201ENST00000384641 111 ntBASIC1.19□□□□□ -2.22
SIX2Q9NPC8 Y_RNA.555-201ENST00000384673 110 ntBASIC1.19□□□□□ -2.22
SIX2Q9NPC8 RNU6-938P-201ENST00000411285 103 ntBASIC1.19□□□□□ -2.22
SIX2Q9NPC8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.19□□□□□ -2.22
SIX2Q9NPC8 AF228730.3-201ENST00000436691 102 ntBASIC1.19□□□□□ -2.22
SIX2Q9NPC8 AC087499.4-201ENST00000448505 178 ntBASIC1.19□□□□□ -2.22
SIX2Q9NPC8 RNU6-165P-201ENST00000517170 99 ntBASIC1.19□□□□□ -2.22
SIX2Q9NPC8 MIR4764-201ENST00000580680 88 ntBASIC1.19□□□□□ -2.22
SIX2Q9NPC8 AL157834.3-201ENST00000615543 103 ntBASIC1.19□□□□□ -2.22
SIX2Q9NPC8 AL121890.5-201ENST00000620848 304 ntBASIC1.19□□□□□ -2.22
SIX2Q9NPC8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.19□□□□□ -2.22
SIX2Q9NPC8 Y_RNA.140-201ENST00000363474 103 ntBASIC1.18□□□□□ -2.22
SIX2Q9NPC8 SNORA1.2-201ENST00000365189 134 ntBASIC1.18□□□□□ -2.22
SIX2Q9NPC8 RNU6-597P-201ENST00000365620 102 ntBASIC1.18□□□□□ -2.22
SIX2Q9NPC8 MIR520C-201ENST00000385005 87 ntBASIC1.18□□□□□ -2.22
SIX2Q9NPC8 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
SIX2Q9NPC8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.18□□□□□ -2.22
SIX2Q9NPC8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SIX2Q9NPC8 RNU6-239P-201ENST00000390990 99 ntBASIC1.18□□□□□ -2.22
SIX2Q9NPC8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.18□□□□□ -2.22
SIX2Q9NPC8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.18□□□□□ -2.22
SIX2Q9NPC8 AP003484.1-201ENST00000530974 250 ntBASIC1.18□□□□□ -2.22
SIX2Q9NPC8 MIR3129-201ENST00000581095 76 ntBASIC1.18□□□□□ -2.22
SIX2Q9NPC8 AL096861.1-201ENST00000610899 123 ntBASIC1.18□□□□□ -2.22
SIX2Q9NPC8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SIX2Q9NPC8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.18□□□□□ -2.22
SIX2Q9NPC8 Y_RNA.337-201ENST00000365312 102 ntBASIC1.17□□□□□ -2.22
SIX2Q9NPC8 Y_RNA.393-201ENST00000383936 102 ntBASIC1.17□□□□□ -2.22
SIX2Q9NPC8 Y_RNA.410-201ENST00000383992 113 ntBASIC1.17□□□□□ -2.22
SIX2Q9NPC8 Y_RNA.521-201ENST00000384560 114 ntBASIC1.17□□□□□ -2.22
SIX2Q9NPC8 RNU6-768P-201ENST00000384683 107 ntBASIC1.17□□□□□ -2.22
SIX2Q9NPC8 SNORD77.3-201ENST00000391113 65 ntBASIC1.17□□□□□ -2.22
SIX2Q9NPC8 RNU6-1135P-201ENST00000411083 103 ntBASIC1.17□□□□□ -2.22
SIX2Q9NPC8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.17□□□□□ -2.22
SIX2Q9NPC8 RNU7-121P-201ENST00000516604 62 ntBASIC1.17□□□□□ -2.22
SIX2Q9NPC8 SNORD36C-201ENST00000516733 66 ntBASIC1.17□□□□□ -2.22
SIX2Q9NPC8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SIX2Q9NPC8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-34-201ENST00000362441 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-12-201ENST00000362583 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-29-201ENST00000362834 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-9-201ENST00000362912 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-21-201ENST00000362963 81 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-14-201ENST00000363090 81 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-13-201ENST00000363358 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-41-201ENST00000363608 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-11-201ENST00000363616 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-5-201ENST00000363633 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-39-201ENST00000363694 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-4-201ENST00000363810 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-16-201ENST00000363887 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-6-201ENST00000363942 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 SNORD115-42-201ENST00000364273 82 ntBASIC1.16□□□□□ -2.22
SIX2Q9NPC8 Y_RNA.241-201ENST00000364470 117 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms