Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 RNU1-68P-201ENST00000615382 146 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 U1.39-201ENST00000621562 146 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 U4.6-201ENST00000621618 127 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 AL355480.1-201ENST00000629041 99 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR1297-201ENST00000637311 77 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 AL365361.1-201ENST00000566942 3481 ntBASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP3-1Q9BYR8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORD9-201ENST00000362566 104 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 RNA5SP50-201ENST00000363731 107 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR588-201ENST00000384900 83 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR548U-201ENST00000390728 81 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU6-360P-201ENST00000390944 104 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 BX276092.1-201ENST00000427368 251 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 UBBP3-201ENST00000445497 241 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 RPS27P29-201ENST00000463110 252 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 Y_RNA.681-201ENST00000516445 113 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR6875-201ENST00000617506 72 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR6730-201ENST00000622213 67 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 AP003355.3-201ENST00000623465 114 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR6830-201ENST00000636015 70 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR7153-201ENST00000637758 57 ntBASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP3-1Q9BYR8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 Y_RNA.119-201ENST00000363301 96 ntBASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 Y_RNA.264-201ENST00000364665 102 ntBASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 MIR653-201ENST00000385279 96 ntBASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORD77.2-201ENST00000391045 68 ntBASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU6-243P-201ENST00000391140 107 ntBASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU6-466P-201ENST00000391224 103 ntBASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU6-1254P-201ENST00000391266 104 ntBASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 RNA5SP270-201ENST00000411361 118 ntBASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 AC023790.1-201ENST00000482174 347 ntBASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORA31.15-201ENST00000516771 132 ntBASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 AC104996.3-201ENST00000590718 94 ntBASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 AC073476.4-201ENST00000628409 72 ntBASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP3-1Q9BYR8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 AC008163.1-202ENST00000636004 2889 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 RNA5SP383-201ENST00000362934 120 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORD56.5-201ENST00000364281 72 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORA62-201ENST00000365493 153 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 RNA5SP292-201ENST00000390974 118 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 RNA5SP100-201ENST00000410903 110 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 RNA5SP59-201ENST00000410922 110 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 HSPE1P24-201ENST00000450782 238 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 RN7SL330P-201ENST00000469709 307 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORA31.17-201ENST00000516953 127 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 RNU6-448P-201ENST00000517052 107 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 AC121758.2-201ENST00000553271 193 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORD92-201ENST00000585078 85 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 SNORA50A-202ENST00000629536 136 ntBASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KRTAP3-1Q9BYR8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 AC015813.6-201ENST00000624409 5808 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 RNA5SP119-201ENST00000362715 117 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 Y_RNA.283-201ENST00000364798 112 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 Y_RNA.340-201ENST00000365330 92 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6-53P-201ENST00000365367 106 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR635-201ENST00000384830 98 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR563-201ENST00000385080 79 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 RNA5SP344-201ENST00000411081 104 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 RNA5SP445-201ENST00000515889 115 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6-70P-201ENST00000516438 60 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 SNORA18.5-201ENST00000516616 101 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 RNU6-1015P-201ENST00000517121 99 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR3064-201ENST00000581130 66 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR4264-201ENST00000583520 66 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 MIR6758-201ENST00000620653 63 ntBASIC1.71□□□□□ -2.14
KRTAP3-1Q9BYR8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms