Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AF228730.3-201ENST00000436691 102 ntBASIC2.09□□□□□ -2.07
RTF1Q92541 RNA5SP272-201ENST00000516095 111 ntBASIC2.09□□□□□ -2.07
RTF1Q92541 SNORD3E-202ENST00000627253 216 ntBASIC2.09□□□□□ -2.07
RTF1Q92541 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RTF1Q92541 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
RTF1Q92541 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RTF1Q92541 MIR378A-201ENST00000362177 66 ntBASIC2.08□□□□□ -2.08
RTF1Q92541 Y_RNA.120-201ENST00000363304 110 ntBASIC2.08□□□□□ -2.08
RTF1Q92541 MIR194-1-201ENST00000384892 85 ntBASIC2.08□□□□□ -2.08
RTF1Q92541 RNU6-460P-201ENST00000391158 108 ntBASIC2.08□□□□□ -2.08
RTF1Q92541 MTND4LP9-201ENST00000427694 174 ntBASIC2.08□□□□□ -2.08
RTF1Q92541 AC087499.4-201ENST00000448505 178 ntBASIC2.08□□□□□ -2.08
RTF1Q92541 TUG1_4.1-201ENST00000619464 181 ntBASIC2.08□□□□□ -2.08
RTF1Q92541 AC015726.2-201ENST00000620112 122 ntBASIC2.08□□□□□ -2.08
RTF1Q92541 Y_RNA.37-201ENST00000362606 108 ntBASIC2.07□□□□□ -2.08
RTF1Q92541 RNA5SP247-201ENST00000411181 105 ntBASIC2.07□□□□□ -2.08
RTF1Q92541 AP001328.1-201ENST00000528550 176 ntBASIC2.07□□□□□ -2.08
RTF1Q92541 MIR3122-201ENST00000577243 73 ntBASIC2.07□□□□□ -2.08
RTF1Q92541 MIR4299-201ENST00000577899 72 ntBASIC2.07□□□□□ -2.08
RTF1Q92541 MIR4713-201ENST00000582691 75 ntBASIC2.07□□□□□ -2.08
RTF1Q92541 MIR5197-201ENST00000583721 112 ntBASIC2.07□□□□□ -2.08
RTF1Q92541 BX248123.2-201ENST00000606318 124 ntBASIC2.07□□□□□ -2.08
RTF1Q92541 Y_RNA.52-201ENST00000362760 96 ntBASIC2.06□□□□□ -2.08
RTF1Q92541 RNU6-414P-201ENST00000363705 104 ntBASIC2.06□□□□□ -2.08
RTF1Q92541 SNORA20-201ENST00000384662 132 ntBASIC2.06□□□□□ -2.08
RTF1Q92541 BTF3P4-201ENST00000418852 495 ntBASIC2.06□□□□□ -2.08
RTF1Q92541 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.06□□□□□ -2.08
RTF1Q92541 JTBP1-201ENST00000441314 247 ntBASIC2.06□□□□□ -2.08
RTF1Q92541 RPL23AP6-201ENST00000446637 472 ntBASIC2.06□□□□□ -2.08
RTF1Q92541 AC093850.1-201ENST00000454121 251 ntBASIC2.06□□□□□ -2.08
RTF1Q92541 RNU4-57P-201ENST00000515980 135 ntBASIC2.06□□□□□ -2.08
RTF1Q92541 U2.22-201ENST00000636441 106 ntBASIC2.06□□□□□ -2.08
RTF1Q92541 RNU1-42P-201ENST00000364033 160 ntBASIC2.05□□□□□ -2.08
RTF1Q92541 RNU6-60P-201ENST00000364792 103 ntBASIC2.05□□□□□ -2.08
RTF1Q92541 RNU6-915P-201ENST00000364943 103 ntBASIC2.05□□□□□ -2.08
RTF1Q92541 Y_RNA.338-201ENST00000365320 114 ntBASIC2.05□□□□□ -2.08
RTF1Q92541 MIR539-201ENST00000365690 78 ntBASIC2.05□□□□□ -2.08
RTF1Q92541 RNU6-1189P-201ENST00000383958 107 ntBASIC2.05□□□□□ -2.08
RTF1Q92541 RNU6-203P-201ENST00000384038 104 ntBASIC2.05□□□□□ -2.08
RTF1Q92541 SNORA19-201ENST00000384737 128 ntBASIC2.05□□□□□ -2.08
RTF1Q92541 MIR136-201ENST00000385207 82 ntBASIC2.05□□□□□ -2.08
RTF1Q92541 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RTF1Q92541 AC004965.1-201ENST00000413033 213 ntBASIC2.05□□□□□ -2.08
RTF1Q92541 AL161935.2-201ENST00000414627 60 ntBASIC2.05□□□□□ -2.08
RTF1Q92541 RPL31P63-201ENST00000422565 375 ntBASIC2.05□□□□□ -2.08
RTF1Q92541 U7.2-201ENST00000607576 63 ntBASIC2.05□□□□□ -2.08
RTF1Q92541 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RTF1Q92541 SNORD18B-201ENST00000365659 72 ntBASIC2.04□□□□□ -2.08
RTF1Q92541 MIR517C-201ENST00000385103 95 ntBASIC2.04□□□□□ -2.08
RTF1Q92541 SNORA67.6-201ENST00000391093 99 ntBASIC2.04□□□□□ -2.08
RTF1Q92541 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.04□□□□□ -2.08
RTF1Q92541 MIR4778-201ENST00000577635 80 ntBASIC2.04□□□□□ -2.08
RTF1Q92541 AL645939.4-201ENST00000604495 135 ntBASIC2.04□□□□□ -2.08
RTF1Q92541 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.04□□□□□ -2.08
RTF1Q92541 U8.1-201ENST00000362843 134 ntBASIC2.03□□□□□ -2.08
RTF1Q92541 RNU6-959P-201ENST00000384671 107 ntBASIC2.03□□□□□ -2.08
RTF1Q92541 AL603914.1-201ENST00000401964 204 ntBASIC2.03□□□□□ -2.08
RTF1Q92541 RNU6-938P-201ENST00000411285 103 ntBASIC2.03□□□□□ -2.08
RTF1Q92541 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.03□□□□□ -2.08
RTF1Q92541 MTATP6P21-201ENST00000440681 189 ntBASIC2.03□□□□□ -2.08
RTF1Q92541 AP003484.1-201ENST00000530974 250 ntBASIC2.03□□□□□ -2.08
RTF1Q92541 AL512598.1-201ENST00000610158 273 ntBASIC2.03□□□□□ -2.08
RTF1Q92541 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.02□□□□□ -2.09
RTF1Q92541 RNA5SP363-201ENST00000365072 115 ntBASIC2.02□□□□□ -2.09
RTF1Q92541 MIR526A1-201ENST00000384897 85 ntBASIC2.02□□□□□ -2.09
RTF1Q92541 AP1B1P2-201ENST00000416196 106 ntBASIC2.02□□□□□ -2.09
RTF1Q92541 SCARNA15-202ENST00000516881 127 ntBASIC2.02□□□□□ -2.09
RTF1Q92541 RNU2-60P-201ENST00000517290 128 ntBASIC2.02□□□□□ -2.09
RTF1Q92541 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RTF1Q92541 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.02□□□□□ -2.09
RTF1Q92541 MIR516B2-201ENST00000385190 85 ntBASIC2.01□□□□□ -2.09
RTF1Q92541 AL606753.1-201ENST00000427435 87 ntBASIC2.01□□□□□ -2.09
RTF1Q92541 AC108729.3-201ENST00000513484 108 ntBASIC2.01□□□□□ -2.09
RTF1Q92541 RNA5SP236-201ENST00000516169 116 ntBASIC2.01□□□□□ -2.09
RTF1Q92541 Y_RNA.692-201ENST00000516627 105 ntBASIC2.01□□□□□ -2.09
RTF1Q92541 SNORD36C-201ENST00000516733 66 ntBASIC2.01□□□□□ -2.09
RTF1Q92541 MIR4498-201ENST00000577599 66 ntBASIC2.01□□□□□ -2.09
RTF1Q92541 Y_RNA.757-201ENST00000578934 114 ntBASIC2.01□□□□□ -2.09
RTF1Q92541 AC095038.3-201ENST00000634439 195 ntBASIC2.01□□□□□ -2.09
RTF1Q92541 MIR376A2-201ENST00000636782 80 ntBASIC2.01□□□□□ -2.09
RTF1Q92541 MTND5P32-201ENST00000560711 1802 ntBASIC2.01□□□□□ -2.09
RTF1Q92541 SNORA1.2-201ENST00000365189 134 ntBASIC2□□□□□ -2.09
RTF1Q92541 SNORA2.2-201ENST00000365473 135 ntBASIC2□□□□□ -2.09
RTF1Q92541 Y_RNA.440-201ENST00000384120 114 ntBASIC2□□□□□ -2.09
RTF1Q92541 RNU6-439P-201ENST00000384188 106 ntBASIC2□□□□□ -2.09
RTF1Q92541 RNU6-1117P-201ENST00000384525 104 ntBASIC2□□□□□ -2.09
RTF1Q92541 SNORA40.5-201ENST00000391061 128 ntBASIC2□□□□□ -2.09
RTF1Q92541 U8.17-201ENST00000391292 132 ntBASIC2□□□□□ -2.09
RTF1Q92541 MIR1323-201ENST00000408090 73 ntBASIC2□□□□□ -2.09
RTF1Q92541 MIR1267-201ENST00000408723 78 ntBASIC2□□□□□ -2.09
RTF1Q92541 Y_RNA.686-201ENST00000516548 134 ntBASIC2□□□□□ -2.09
RTF1Q92541 RNU6-1149P-201ENST00000516810 97 ntBASIC2□□□□□ -2.09
RTF1Q92541 DNAJC19P9-201ENST00000555084 351 ntBASIC2□□□□□ -2.09
RTF1Q92541 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2□□□□□ -2.09
RTF1Q92541 snoU13.31-201ENST00000607291 104 ntBASIC2□□□□□ -2.09
RTF1Q92541 AC011603.4-201ENST00000611325 277 ntBASIC2□□□□□ -2.09
RTF1Q92541 MIR8074-201ENST00000615081 81 ntBASIC2□□□□□ -2.09
RTF1Q92541 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
RTF1Q92541 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
RTF1Q92541 SNORD115-34-201ENST00000362441 82 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms