Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RNU6-649P-201ENST00000384463 107 ntBASIC3.52□□□□□ -1.85
PTCD2Q8WV60 MIR218-2-201ENST00000385006 110 ntBASIC3.52□□□□□ -1.85
PTCD2Q8WV60 SNORA11.2-201ENST00000408318 127 ntBASIC3.52□□□□□ -1.85
PTCD2Q8WV60 MIR1265-201ENST00000408444 86 ntBASIC3.52□□□□□ -1.85
PTCD2Q8WV60 SCARNA16.3-201ENST00000516595 184 ntBASIC3.52□□□□□ -1.85
PTCD2Q8WV60 SCARNA13-201ENST00000516672 275 ntBASIC3.52□□□□□ -1.85
PTCD2Q8WV60 SNORA74.3-201ENST00000517108 154 ntBASIC3.52□□□□□ -1.85
PTCD2Q8WV60 NDUFB9P3-201ENST00000521269 501 ntBASIC3.52□□□□□ -1.85
PTCD2Q8WV60 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTCD2Q8WV60 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTCD2Q8WV60 AP006437.1-201ENST00000641440 3685 ntBASIC3.51□□□□□ -1.85
PTCD2Q8WV60 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PTCD2Q8WV60 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PTCD2Q8WV60 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
PTCD2Q8WV60 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PTCD2Q8WV60 RNU6-461P-201ENST00000364195 107 ntBASIC3.51□□□□□ -1.85
PTCD2Q8WV60 RNY1P2-201ENST00000364820 117 ntBASIC3.51□□□□□ -1.85
PTCD2Q8WV60 SNORD38B-201ENST00000384690 67 ntBASIC3.51□□□□□ -1.85
PTCD2Q8WV60 MIR660-201ENST00000385235 97 ntBASIC3.51□□□□□ -1.85
PTCD2Q8WV60 RNU2-59P-201ENST00000410482 191 ntBASIC3.51□□□□□ -1.85
PTCD2Q8WV60 Y_RNA.648-201ENST00000459455 110 ntBASIC3.51□□□□□ -1.85
PTCD2Q8WV60 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.51□□□□□ -1.85
PTCD2Q8WV60 AC090897.1-201ENST00000580909 226 ntBASIC3.51□□□□□ -1.85
PTCD2Q8WV60 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.51□□□□□ -1.85
PTCD2Q8WV60 SNORD38B-202ENST00000625943 69 ntBASIC3.51□□□□□ -1.85
PTCD2Q8WV60 MIR1297-201ENST00000637311 77 ntBASIC3.51□□□□□ -1.85
PTCD2Q8WV60 AL356274.2-201ENST00000624379 3752 ntBASIC3.51□□□□□ -1.85
PTCD2Q8WV60 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PTCD2Q8WV60 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PTCD2Q8WV60 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PTCD2Q8WV60 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PTCD2Q8WV60 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTCD2Q8WV60 RNU4-35P-201ENST00000362588 141 ntBASIC3.5□□□□□ -1.85
PTCD2Q8WV60 RNU6-811P-201ENST00000384069 107 ntBASIC3.5□□□□□ -1.85
PTCD2Q8WV60 AL023284.1-201ENST00000403956 276 ntBASIC3.5□□□□□ -1.85
PTCD2Q8WV60 BX510359.4-201ENST00000423750 193 ntBASIC3.5□□□□□ -1.85
PTCD2Q8WV60 RNU6-634P-201ENST00000459134 106 ntBASIC3.5□□□□□ -1.85
PTCD2Q8WV60 RPS27P21-201ENST00000486977 252 ntBASIC3.5□□□□□ -1.85
PTCD2Q8WV60 RNU7-43P-201ENST00000516554 64 ntBASIC3.5□□□□□ -1.85
PTCD2Q8WV60 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.5□□□□□ -1.85
PTCD2Q8WV60 MIR4500-201ENST00000579472 76 ntBASIC3.5□□□□□ -1.85
PTCD2Q8WV60 AL449363.1-201ENST00000617815 186 ntBASIC3.5□□□□□ -1.85
PTCD2Q8WV60 AC008133.2-201ENST00000624540 351 ntBASIC3.5□□□□□ -1.85
PTCD2Q8WV60 SNORA50A-202ENST00000629536 136 ntBASIC3.5□□□□□ -1.85
PTCD2Q8WV60 AL021368.2-201ENST00000606125 5352 ntBASIC3.5□□□□□ -1.85
PTCD2Q8WV60 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTCD2Q8WV60 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTCD2Q8WV60 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTCD2Q8WV60 RNVU1-14-201ENST00000384770 164 ntBASIC3.49□□□□□ -1.85
PTCD2Q8WV60 RNU4-83P-201ENST00000410863 133 ntBASIC3.49□□□□□ -1.85
PTCD2Q8WV60 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.49□□□□□ -1.85
PTCD2Q8WV60 AC141846.1-201ENST00000568348 142 ntBASIC3.49□□□□□ -1.85
PTCD2Q8WV60 MIR4709-201ENST00000577272 72 ntBASIC3.49□□□□□ -1.85
PTCD2Q8WV60 MIR4536-1-201ENST00000583537 88 ntBASIC3.49□□□□□ -1.85
PTCD2Q8WV60 MIR7975-201ENST00000619350 68 ntBASIC3.49□□□□□ -1.85
PTCD2Q8WV60 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTCD2Q8WV60 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PTCD2Q8WV60 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCD2Q8WV60 AL161431.1-201ENST00000618966 4205 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCD2Q8WV60 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCD2Q8WV60 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.48□□□□□ -1.85
PTCD2Q8WV60 RNA5SP72-201ENST00000364442 117 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 SNORA72.6-201ENST00000384520 129 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 MIR34B-201ENST00000385076 84 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 MIR634-201ENST00000385208 97 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 SNORD17-201ENST00000390930 237 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 RNU11-3P-201ENST00000391111 133 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 SNORD30.1-201ENST00000391309 70 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 RNA5SP293-201ENST00000410527 113 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 AC104332.2-201ENST00000429959 156 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 RPS27P29-201ENST00000463110 252 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 AC023790.1-201ENST00000482174 347 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 AC092185.1-201ENST00000491371 97 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 AC021506.2-201ENST00000612354 169 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 SCARNA15.3-201ENST00000626315 122 ntBASIC3.48□□□□□ -1.85
PTCD2Q8WV60 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PTCD2Q8WV60 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTCD2Q8WV60 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.47□□□□□ -1.85
PTCD2Q8WV60 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PTCD2Q8WV60 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PTCD2Q8WV60 MIR30E-201ENST00000362104 92 ntBASIC3.47□□□□□ -1.85
PTCD2Q8WV60 MIR635-201ENST00000384830 98 ntBASIC3.47□□□□□ -1.85
PTCD2Q8WV60 MIR520A-201ENST00000384862 85 ntBASIC3.47□□□□□ -1.85
PTCD2Q8WV60 SNORD77.2-201ENST00000391045 68 ntBASIC3.47□□□□□ -1.85
PTCD2Q8WV60 RNU6-687P-201ENST00000516443 89 ntBASIC3.47□□□□□ -1.85
PTCD2Q8WV60 RNU6-850P-201ENST00000516934 103 ntBASIC3.47□□□□□ -1.85
PTCD2Q8WV60 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.47□□□□□ -1.85
PTCD2Q8WV60 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PTCD2Q8WV60 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.47□□□□□ -1.85
PTCD2Q8WV60 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.47□□□□□ -1.85
PTCD2Q8WV60 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTCD2Q8WV60 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PTCD2Q8WV60 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTCD2Q8WV60 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PTCD2Q8WV60 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.46□□□□□ -1.86
PTCD2Q8WV60 Y_RNA.264-201ENST00000364665 102 ntBASIC3.46□□□□□ -1.86
PTCD2Q8WV60 RN7SL442P-201ENST00000473804 320 ntBASIC3.46□□□□□ -1.86
PTCD2Q8WV60 MIR4764-201ENST00000580680 88 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 211.8 ms