Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 Y_RNA.486-201ENST00000384398 107 ntBASIC1.07□□□□□ -2.24
RTL3Q8N8U3 MIR499A-201ENST00000384903 122 ntBASIC1.07□□□□□ -2.24
RTL3Q8N8U3 MIR15B-201ENST00000385045 98 ntBASIC1.07□□□□□ -2.24
RTL3Q8N8U3 MIR136-201ENST00000385207 82 ntBASIC1.07□□□□□ -2.24
RTL3Q8N8U3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.07□□□□□ -2.24
RTL3Q8N8U3 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
RTL3Q8N8U3 RPS23P4-201ENST00000487908 423 ntBASIC1.07□□□□□ -2.24
RTL3Q8N8U3 RNA5SP153-201ENST00000516498 76 ntBASIC1.07□□□□□ -2.24
RTL3Q8N8U3 MIR4744-201ENST00000581563 82 ntBASIC1.07□□□□□ -2.24
RTL3Q8N8U3 Pinc.1-201ENST00000616452 154 ntBASIC1.07□□□□□ -2.24
RTL3Q8N8U3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
RTL3Q8N8U3 SNORD45.3-201ENST00000363836 72 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.257-201ENST00000364596 102 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 RNU6-200P-201ENST00000364743 107 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 SNORD24-201ENST00000383884 75 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 SNORD38C-201ENST00000384381 69 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.571-201ENST00000384753 98 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 MIR548A2-201ENST00000384956 97 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 MIR516B2-201ENST00000385190 85 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 RNU6-493P-201ENST00000391321 108 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 AC245047.7-201ENST00000440265 293 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 UBL5P1-201ENST00000507979 193 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 RNU4-57P-201ENST00000515980 135 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.700-201ENST00000516806 100 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 SNORA74.3-201ENST00000517108 154 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.06□□□□□ -2.24
RTL3Q8N8U3 FAM106DP-201ENST00000586416 501 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 AC108706.1-201ENST00000611053 297 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 MIR8070-201ENST00000616510 88 ntBASIC1.06□□□□□ -2.24
RTL3Q8N8U3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.75-201ENST00000362927 97 ntBASIC1.05□□□□□ -2.24
RTL3Q8N8U3 RNU6-888P-201ENST00000363010 101 ntBASIC1.05□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.515-201ENST00000384535 112 ntBASIC1.05□□□□□ -2.24
RTL3Q8N8U3 RNU6-578P-201ENST00000390980 103 ntBASIC1.05□□□□□ -2.24
RTL3Q8N8U3 SNORD12-201ENST00000391002 90 ntBASIC1.05□□□□□ -2.24
RTL3Q8N8U3 RNU6-847P-201ENST00000411115 108 ntBASIC1.05□□□□□ -2.24
RTL3Q8N8U3 AC063976.4-201ENST00000421971 163 ntBASIC1.05□□□□□ -2.24
RTL3Q8N8U3 RNU6-561P-201ENST00000516222 102 ntBASIC1.05□□□□□ -2.24
RTL3Q8N8U3 RNU6-1299P-201ENST00000516316 100 ntBASIC1.05□□□□□ -2.24
RTL3Q8N8U3 AC007751.1-201ENST00000529260 376 ntBASIC1.05□□□□□ -2.24
RTL3Q8N8U3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
RTL3Q8N8U3 RNU4-38P-201ENST00000364472 129 ntBASIC1.04□□□□□ -2.24
RTL3Q8N8U3 RNU6-923P-201ENST00000364753 107 ntBASIC1.04□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.634-201ENST00000364811 113 ntBASIC1.04□□□□□ -2.24
RTL3Q8N8U3 RNU6-47P-201ENST00000383866 107 ntBASIC1.04□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.432-201ENST00000384087 111 ntBASIC1.04□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.785-201ENST00000384290 109 ntBASIC1.04□□□□□ -2.24
RTL3Q8N8U3 SNORA26-201ENST00000391286 122 ntBASIC1.04□□□□□ -2.24
RTL3Q8N8U3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.04□□□□□ -2.24
RTL3Q8N8U3 MIR548O-201ENST00000408583 114 ntBASIC1.04□□□□□ -2.24
RTL3Q8N8U3 SNORD123-201ENST00000459473 70 ntBASIC1.04□□□□□ -2.24
RTL3Q8N8U3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
RTL3Q8N8U3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.04□□□□□ -2.24
RTL3Q8N8U3 RNU6-138P-201ENST00000515952 107 ntBASIC1.04□□□□□ -2.24
RTL3Q8N8U3 RNU6-197P-201ENST00000516680 100 ntBASIC1.04□□□□□ -2.24
RTL3Q8N8U3 AC109810.1-201ENST00000534066 224 ntBASIC1.04□□□□□ -2.24
RTL3Q8N8U3 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
RTL3Q8N8U3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
RTL3Q8N8U3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
RTL3Q8N8U3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.91-201ENST00000363042 107 ntBASIC1.03□□□□□ -2.24
RTL3Q8N8U3 RNU6-275P-201ENST00000364910 107 ntBASIC1.03□□□□□ -2.24
RTL3Q8N8U3 RNU6-728P-201ENST00000365375 104 ntBASIC1.03□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.547-201ENST00000384654 119 ntBASIC1.03□□□□□ -2.24
RTL3Q8N8U3 MIR518F-201ENST00000384973 87 ntBASIC1.03□□□□□ -2.24
RTL3Q8N8U3 MIR802-201ENST00000390235 94 ntBASIC1.03□□□□□ -2.24
RTL3Q8N8U3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.03□□□□□ -2.24
RTL3Q8N8U3 Y_RNA.666-201ENST00000516187 112 ntBASIC1.03□□□□□ -2.24
RTL3Q8N8U3 RNU7-25P-201ENST00000516544 62 ntBASIC1.03□□□□□ -2.24
RTL3Q8N8U3 RNU7-43P-201ENST00000516554 64 ntBASIC1.03□□□□□ -2.24
RTL3Q8N8U3 RNU2-4P-201ENST00000606190 192 ntBASIC1.03□□□□□ -2.24
RTL3Q8N8U3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.03□□□□□ -2.24
RTL3Q8N8U3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RTL3Q8N8U3 RNU6-1020P-201ENST00000363684 107 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 Y_RNA.297-201ENST00000364950 91 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 SNORD61-201ENST00000384252 73 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 RNU4-70P-201ENST00000384579 139 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 MIR19B1-201ENST00000384829 87 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 Y_RNA.622-201ENST00000411091 108 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.02□□□□□ -2.25
RTL3Q8N8U3 snoU13.25-201ENST00000458945 104 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 Y_RNA.644-201ENST00000459006 113 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.02□□□□□ -2.25
RTL3Q8N8U3 RNU2-13P-201ENST00000515909 113 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 Y_RNA.674-201ENST00000516362 113 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 RNU6-504P-201ENST00000516568 104 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 RNU6-365P-201ENST00000517113 106 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 RNU6-794P-201ENST00000517261 64 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 MRPS18CP4-201ENST00000535821 231 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 AL391516.1-201ENST00000554380 2449 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 AL096861.1-201ENST00000610899 123 ntBASIC1.02□□□□□ -2.25
RTL3Q8N8U3 Y_RNA.233-201ENST00000364407 101 ntBASIC1.01□□□□□ -2.25
RTL3Q8N8U3 Y_RNA.412-201ENST00000384001 104 ntBASIC1.01□□□□□ -2.25
RTL3Q8N8U3 SNORA80D-201ENST00000384488 135 ntBASIC1.01□□□□□ -2.25
RTL3Q8N8U3 U8.17-201ENST00000391292 132 ntBASIC1.01□□□□□ -2.25
RTL3Q8N8U3 AL138752.1-201ENST00000452964 351 ntBASIC1.01□□□□□ -2.25
RTL3Q8N8U3 RNU7-120P-201ENST00000459334 63 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 263.2 ms