Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 RNU6-117P-201ENST00000365415 107 ntBASIC1.24□□□□□ -2.21
RAPH1Q70E73 MIR616-201ENST00000385293 97 ntBASIC1.24□□□□□ -2.21
RAPH1Q70E73 RNU6-239P-201ENST00000390990 99 ntBASIC1.24□□□□□ -2.21
RAPH1Q70E73 OR2A41P-201ENST00000473586 105 ntBASIC1.24□□□□□ -2.21
RAPH1Q70E73 AC004223.1-201ENST00000479840 271 ntBASIC1.24□□□□□ -2.21
RAPH1Q70E73 MIR4431-201ENST00000579990 94 ntBASIC1.24□□□□□ -2.21
RAPH1Q70E73 MIR3660-201ENST00000584845 100 ntBASIC1.24□□□□□ -2.21
RAPH1Q70E73 AL022345.2-201ENST00000606307 135 ntBASIC1.24□□□□□ -2.21
RAPH1Q70E73 SNORA28-201ENST00000606769 126 ntBASIC1.24□□□□□ -2.21
RAPH1Q70E73 RNU6-1209P-201ENST00000363655 107 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 RNU6-312P-201ENST00000364629 107 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 RNU6-728P-201ENST00000365375 104 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 RNU6-643P-201ENST00000384018 107 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 Y_RNA.420-201ENST00000384043 110 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 Y_RNA.435-201ENST00000384095 112 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 Y_RNA.568-201ENST00000384742 113 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 MIR660-201ENST00000385235 97 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RAPH1Q70E73 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 MTND4LP9-201ENST00000427694 174 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 AL392103.1-201ENST00000447000 198 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 AC107027.2-201ENST00000512197 115 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 RNU6-922P-201ENST00000516753 99 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 RNU6-341P-201ENST00000516973 96 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 AC112693.2-201ENST00000556538 232 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 AC091178.2-201ENST00000584401 117 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 AC120024.3-201ENST00000603167 156 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 MIR6844-201ENST00000637122 62 ntBASIC1.23□□□□□ -2.21
RAPH1Q70E73 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
RAPH1Q70E73 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
RAPH1Q70E73 RNU6-235P-201ENST00000362644 107 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 RNU6-1290P-201ENST00000362957 109 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 SNORD68-201ENST00000363214 84 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 Y_RNA.121-201ENST00000363309 113 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 Y_RNA.203-201ENST00000364106 102 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 MIR520G-201ENST00000385064 90 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 MIR526A2-201ENST00000390198 65 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 SNORD72-201ENST00000390994 80 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 Y_RNA.586-201ENST00000391146 98 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 MIR513C-201ENST00000401352 84 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 RNU6-321P-201ENST00000410912 106 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 STAG3L5P-204ENST00000443759 179 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 HSPE1P13-201ENST00000451143 297 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 Y_RNA.686-201ENST00000516548 134 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 RNU7-28P-201ENST00000516759 62 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 RNU6-1270P-201ENST00000517128 108 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 RNU6-1116P-201ENST00000517269 99 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.22□□□□□ -2.21
RAPH1Q70E73 MIR548X2-201ENST00000579776 100 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 MIR4781-201ENST00000585250 76 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 AL513534.2-201ENST00000603836 250 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 AL359821.1-201ENST00000605519 182 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 AC011603.4-201ENST00000611325 277 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 Pinc.1-201ENST00000616452 154 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 AC010332.2-201ENST00000613083 1904 ntBASIC1.22□□□□□ -2.21
RAPH1Q70E73 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
RAPH1Q70E73 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RAPH1Q70E73 RNU6-103P-201ENST00000363686 107 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 Y_RNA.218-201ENST00000364218 104 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 Y_RNA.796-201ENST00000364268 102 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 Y_RNA.291-201ENST00000364886 113 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 Y_RNA.799-201ENST00000364992 102 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 RNY1P5-201ENST00000383890 115 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 RNU6-1323P-201ENST00000384025 107 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 Y_RNA.486-201ENST00000384398 107 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 SNORA22C-201ENST00000384614 134 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 MIR222-201ENST00000384992 110 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 Y_RNA.580-201ENST00000391004 95 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 RNU2-70P-201ENST00000410718 179 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 AC009474.2-201ENST00000451383 136 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 RNU7-107P-201ENST00000459121 61 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 AC005840.1-201ENST00000498412 377 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 AP002004.2-201ENST00000531656 154 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 MIR4421-201ENST00000578133 69 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 DNAJC19P2-201ENST00000593340 302 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 MTND1P7-201ENST00000632801 297 ntBASIC1.21□□□□□ -2.22
RAPH1Q70E73 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.21□□□□□ -2.22
RAPH1Q70E73 SNORA1B-201ENST00000362535 133 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 Y_RNA.337-201ENST00000365312 102 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 RNU6-144P-201ENST00000383951 107 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 SNORA72-201ENST00000384339 132 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 RNU6-1154P-201ENST00000391001 104 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 SNRPGP10-201ENST00000432323 225 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.2□□□□□ -2.22
RAPH1Q70E73 NDUFA4P2-201ENST00000489989 244 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.2□□□□□ -2.22
RAPH1Q70E73 TRMT112P2-201ENST00000512910 132 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 Y_RNA.666-201ENST00000516187 112 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 RNU7-149P-201ENST00000516739 59 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 AL358944.1-201ENST00000528537 144 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 MIR4778-201ENST00000577635 80 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 MIR3129-201ENST00000581095 76 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 HSPE1P19-201ENST00000603327 295 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 JPX_2.1-201ENST00000614161 69 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 AL591926.4-201ENST00000616895 298 ntBASIC1.2□□□□□ -2.22
RAPH1Q70E73 RNU1-124P-201ENST00000363861 145 ntBASIC1.19□□□□□ -2.22
RAPH1Q70E73 Y_RNA.253-201ENST00000364562 112 ntBASIC1.19□□□□□ -2.22
RAPH1Q70E73 RNU6-915P-201ENST00000364943 103 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms