Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RNF111Q6ZNA4 RNA5SP68-201ENST00000363885 119 ntBASIC2.34□□□□□ -2.03
RNF111Q6ZNA4 RNU6-296P-201ENST00000384608 107 ntBASIC2.34□□□□□ -2.03
RNF111Q6ZNA4 MIR136-201ENST00000385207 82 ntBASIC2.34□□□□□ -2.03
RNF111Q6ZNA4 RN7SKP192-201ENST00000411291 327 ntBASIC2.34□□□□□ -2.03
RNF111Q6ZNA4 RNA5SP320-201ENST00000516263 124 ntBASIC2.34□□□□□ -2.03
RNF111Q6ZNA4 RNA5SP148-201ENST00000516527 94 ntBASIC2.34□□□□□ -2.03
RNF111Q6ZNA4 AC004812.1-201ENST00000540773 146 ntBASIC2.34□□□□□ -2.03
RNF111Q6ZNA4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.34□□□□□ -2.03
RNF111Q6ZNA4 U4.3-201ENST00000621047 82 ntBASIC2.34□□□□□ -2.03
RNF111Q6ZNA4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RNF111Q6ZNA4 AL442644.1-201ENST00000454390 3105 ntBASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 RNA5SP456-201ENST00000364002 114 ntBASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 SNORA1.2-201ENST00000365189 134 ntBASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 Y_RNA.370-201ENST00000365589 108 ntBASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 RNA5SP270-201ENST00000411361 118 ntBASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 RPL39P25-201ENST00000449384 154 ntBASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 snoU13.27-201ENST00000459278 104 ntBASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 RNA5SP82-201ENST00000516707 92 ntBASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 SNORD14A-201ENST00000606526 91 ntBASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
RNF111Q6ZNA4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 AC080100.1-201ENST00000624239 5356 ntBASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 RNU6-1131P-201ENST00000364955 107 ntBASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 Y_RNA.544-201ENST00000384650 113 ntBASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 RNU6-816P-201ENST00000390914 107 ntBASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 RNU6-1268P-201ENST00000391214 107 ntBASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 RNU6-1239P-201ENST00000391310 107 ntBASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 RNU7-67P-201ENST00000459003 62 ntBASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 SNORA40.13-201ENST00000516379 120 ntBASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 RNU6-958P-201ENST00000516995 106 ntBASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 AC103810.6-201ENST00000606708 136 ntBASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 AL162726.3-218ENST00000636401 95 ntBASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 AP000553.5-201ENST00000641933 54 ntBASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RNF111Q6ZNA4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
RNF111Q6ZNA4 Y_RNA.171-201ENST00000363760 102 ntBASIC2.31□□□□□ -2.04
RNF111Q6ZNA4 Y_RNA.531-201ENST00000384589 121 ntBASIC2.31□□□□□ -2.04
RNF111Q6ZNA4 MIR526A1-201ENST00000384897 85 ntBASIC2.31□□□□□ -2.04
RNF111Q6ZNA4 POLR2J4-204ENST00000418424 324 ntBASIC2.31□□□□□ -2.04
RNF111Q6ZNA4 PGBD4P5-201ENST00000445958 426 ntBASIC2.31□□□□□ -2.04
RNF111Q6ZNA4 AC079804.2-201ENST00000490376 200 ntBASIC2.31□□□□□ -2.04
RNF111Q6ZNA4 AC099513.1-201ENST00000490423 301 ntBASIC2.31□□□□□ -2.04
RNF111Q6ZNA4 RPL23AP94-201ENST00000512518 302 ntBASIC2.31□□□□□ -2.04
RNF111Q6ZNA4 SNORD3E-202ENST00000627253 216 ntBASIC2.31□□□□□ -2.04
RNF111Q6ZNA4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.31□□□□□ -2.04
RNF111Q6ZNA4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.31□□□□□ -2.04
RNF111Q6ZNA4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
RNF111Q6ZNA4 MIR660-201ENST00000385235 97 ntBASIC2.3□□□□□ -2.04
RNF111Q6ZNA4 SNORD28B-201ENST00000390993 75 ntBASIC2.3□□□□□ -2.04
RNF111Q6ZNA4 AC104435.1-201ENST00000483483 166 ntBASIC2.3□□□□□ -2.04
RNF111Q6ZNA4 RPS23P4-201ENST00000487908 423 ntBASIC2.3□□□□□ -2.04
RNF111Q6ZNA4 RNU6-970P-201ENST00000516312 107 ntBASIC2.3□□□□□ -2.04
RNF111Q6ZNA4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.3□□□□□ -2.04
RNF111Q6ZNA4 AC087741.2-201ENST00000619415 172 ntBASIC2.3□□□□□ -2.04
RNF111Q6ZNA4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RNF111Q6ZNA4 AL513423.1-201ENST00000621695 132 ntBASIC2.3□□□□□ -2.04
RNF111Q6ZNA4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.3□□□□□ -2.04
RNF111Q6ZNA4 AC095038.3-201ENST00000634439 195 ntBASIC2.3□□□□□ -2.04
RNF111Q6ZNA4 SNORA70.7-201ENST00000384159 133 ntBASIC2.29□□□□□ -2.04
RNF111Q6ZNA4 RNU7-113P-201ENST00000459273 62 ntBASIC2.29□□□□□ -2.04
RNF111Q6ZNA4 SNORD123-201ENST00000459473 70 ntBASIC2.29□□□□□ -2.04
RNF111Q6ZNA4 AC113410.1-201ENST00000505029 247 ntBASIC2.29□□□□□ -2.04
RNF111Q6ZNA4 RNA5SP481-201ENST00000516814 122 ntBASIC2.29□□□□□ -2.04
RNF111Q6ZNA4 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.29□□□□□ -2.04
RNF111Q6ZNA4 MIR548AR-201ENST00000582191 57 ntBASIC2.29□□□□□ -2.04
RNF111Q6ZNA4 MIR1255B1-201ENST00000636325 63 ntBASIC2.29□□□□□ -2.04
RNF111Q6ZNA4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 RNU6-49P-201ENST00000384256 107 ntBASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 RNU6-1319P-201ENST00000390855 104 ntBASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 RNU6-747P-201ENST00000390928 104 ntBASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 RNU6-241P-201ENST00000391148 104 ntBASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 AL359511.1-201ENST00000402970 211 ntBASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 MIR1912-201ENST00000410389 80 ntBASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 RNU6-1190P-201ENST00000410811 104 ntBASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 RNU6-177P-201ENST00000411257 104 ntBASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 RPS29P29-201ENST00000456396 171 ntBASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 RNU6-904P-201ENST00000516206 101 ntBASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 RNU7-53P-201ENST00000516705 60 ntBASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 RNU6-1258P-201ENST00000516911 111 ntBASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 MIR4791-201ENST00000607666 84 ntBASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.28□□□□□ -2.04
RNF111Q6ZNA4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
RNF111Q6ZNA4 Y_RNA.78-201ENST00000362970 110 ntBASIC2.27□□□□□ -2.05
RNF111Q6ZNA4 RNU6-294P-201ENST00000364999 102 ntBASIC2.27□□□□□ -2.05
RNF111Q6ZNA4 MIR488-201ENST00000365739 83 ntBASIC2.27□□□□□ -2.05
RNF111Q6ZNA4 SUMO1P4-201ENST00000429430 302 ntBASIC2.27□□□□□ -2.05
RNF111Q6ZNA4 MIR3618-201ENST00000580330 88 ntBASIC2.27□□□□□ -2.05
RNF111Q6ZNA4 Y_RNA.773-201ENST00000607168 90 ntBASIC2.27□□□□□ -2.05
RNF111Q6ZNA4 AC067747.1-201ENST00000608026 250 ntBASIC2.27□□□□□ -2.05
RNF111Q6ZNA4 AC243994.1-201ENST00000618627 109 ntBASIC2.27□□□□□ -2.05
RNF111Q6ZNA4 Y_RNA.818-201ENST00000618813 71 ntBASIC2.27□□□□□ -2.05
RNF111Q6ZNA4 MIR203B-201ENST00000636080 86 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 216.2 ms