Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNU6-424P-201ENST00000384367 105 ntBASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 U8.16-201ENST00000391279 133 ntBASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 RNU6-1064P-201ENST00000410626 104 ntBASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 AL591806.2-201ENST00000433122 173 ntBASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 SNORD33.1-201ENST00000516213 88 ntBASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 RNU6-919P-201ENST00000516731 104 ntBASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 SNORD36C-201ENST00000516733 66 ntBASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 MIR8081-201ENST00000611533 95 ntBASIC1.69□□□□□ -2.14
ZNF549Q6P9A3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 SNORD115-28-201ENST00000363931 81 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 SNORD18B-201ENST00000365659 72 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 Y_RNA.410-201ENST00000383992 113 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 RNU6-1056P-201ENST00000383996 107 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 RNU6-476P-201ENST00000384726 107 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 RNA5SP450-201ENST00000411206 102 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 AC069257.2-201ENST00000441819 155 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 AC099513.1-201ENST00000490423 301 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 AC108210.2-201ENST00000503681 201 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 CYCTP-201ENST00000504253 315 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 RN7SKP19-201ENST00000516016 252 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 RNU6-250P-201ENST00000516958 103 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 AC015712.3-201ENST00000559380 164 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 MIR4287-201ENST00000579398 78 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 MIR6129-201ENST00000616087 109 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 AC134878.1-201ENST00000619901 243 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 AC027279.3-201ENST00000625055 122 ntBASIC1.68□□□□□ -2.14
ZNF549Q6P9A3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.67□□□□□ -2.14
ZNF549Q6P9A3 RNY4P18-201ENST00000391107 89 ntBASIC1.67□□□□□ -2.14
ZNF549Q6P9A3 SNORA26.9-201ENST00000391322 122 ntBASIC1.67□□□□□ -2.14
ZNF549Q6P9A3 RNA5SP233-201ENST00000459153 113 ntBASIC1.67□□□□□ -2.14
ZNF549Q6P9A3 RNU6-589P-201ENST00000516485 107 ntBASIC1.67□□□□□ -2.14
ZNF549Q6P9A3 RNU6-548P-201ENST00000517083 115 ntBASIC1.67□□□□□ -2.14
ZNF549Q6P9A3 SNORA28-201ENST00000606769 126 ntBASIC1.67□□□□□ -2.14
ZNF549Q6P9A3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.67□□□□□ -2.14
ZNF549Q6P9A3 Y_RNA.440-201ENST00000384120 114 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 RN7SKP200-201ENST00000410564 320 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 RNA5SP100-201ENST00000410903 110 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 RNA5SP59-201ENST00000410922 110 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 MTATP6P21-201ENST00000440681 189 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 HMGN2P32-201ENST00000444648 269 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 RNU5E-3P-201ENST00000515913 68 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 SNORA31.4-201ENST00000516049 129 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 RNU6-1061P-201ENST00000516530 99 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 RNA5SP168-201ENST00000516642 112 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 AC133485.4-201ENST00000561835 220 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 AC138907.4-201ENST00000570107 226 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 U6.95-201ENST00000636931 70 ntBASIC1.66□□□□□ -2.14
ZNF549Q6P9A3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.14
ZNF549Q6P9A3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 RNU6-349P-201ENST00000362402 107 ntBASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 RNU6-833P-201ENST00000363486 107 ntBASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 RNU6-163P-201ENST00000384396 106 ntBASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 MIR520A-201ENST00000384862 85 ntBASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 MIR802-201ENST00000390235 94 ntBASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 MIR764-201ENST00000390811 85 ntBASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 RPS26P48-201ENST00000491713 339 ntBASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 RNU6-830P-201ENST00000516353 107 ntBASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 RNU6-113P-201ENST00000516653 101 ntBASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 AC021506.2-201ENST00000612354 169 ntBASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 AL391516.1-201ENST00000554380 2449 ntBASIC1.65□□□□□ -2.15
ZNF549Q6P9A3 RNA5SP276-201ENST00000362580 94 ntBASIC1.64□□□□□ -2.15
ZNF549Q6P9A3 Y_RNA.366-201ENST00000365540 102 ntBASIC1.64□□□□□ -2.15
ZNF549Q6P9A3 Y_RNA.494-201ENST00000384432 111 ntBASIC1.64□□□□□ -2.15
ZNF549Q6P9A3 AL034345.1-201ENST00000407768 123 ntBASIC1.64□□□□□ -2.15
ZNF549Q6P9A3 Y_RNA.709-201ENST00000516952 92 ntBASIC1.64□□□□□ -2.15
ZNF549Q6P9A3 AL627230.6-201ENST00000611129 280 ntBASIC1.64□□□□□ -2.15
ZNF549Q6P9A3 AC015726.2-201ENST00000620112 122 ntBASIC1.64□□□□□ -2.15
ZNF549Q6P9A3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 RNU6-153P-201ENST00000364422 104 ntBASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 SNORA2.2-201ENST00000365473 135 ntBASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 AL627390.1-201ENST00000396055 340 ntBASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 AC063976.4-201ENST00000421971 163 ntBASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 AC015922.2-201ENST00000435593 184 ntBASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 AC087499.4-201ENST00000448505 178 ntBASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 RNU6-237P-201ENST00000515985 71 ntBASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 AP003484.1-201ENST00000530974 250 ntBASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 MTND5P34-201ENST00000568888 325 ntBASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 MIR4255-201ENST00000579351 72 ntBASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 AC025166.1-201ENST00000612411 163 ntBASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ZNF549Q6P9A3 MTND5P18-201ENST00000445624 1801 ntBASIC1.62□□□□□ -2.15
ZNF549Q6P9A3 RNU6-950P-201ENST00000384651 107 ntBASIC1.62□□□□□ -2.15
ZNF549Q6P9A3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.62□□□□□ -2.15
ZNF549Q6P9A3 AC093850.1-201ENST00000454121 251 ntBASIC1.62□□□□□ -2.15
ZNF549Q6P9A3 RNU6-240P-201ENST00000516098 97 ntBASIC1.62□□□□□ -2.15
ZNF549Q6P9A3 MIR4769-201ENST00000584126 77 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms