Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 AL357312.1-201ENST00000603879 298 ntBASIC1.32□□□□□ -2.2
KRTCAP3Q53RY4 AL157834.3-201ENST00000615543 103 ntBASIC1.32□□□□□ -2.2
KRTCAP3Q53RY4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTCAP3Q53RY4 Y_RNA.75-201ENST00000362927 97 ntBASIC1.31□□□□□ -2.2
KRTCAP3Q53RY4 Y_RNA.91-201ENST00000363042 107 ntBASIC1.31□□□□□ -2.2
KRTCAP3Q53RY4 Y_RNA.634-201ENST00000364811 113 ntBASIC1.31□□□□□ -2.2
KRTCAP3Q53RY4 RNU6-275P-201ENST00000364910 107 ntBASIC1.31□□□□□ -2.2
KRTCAP3Q53RY4 RNU6-728P-201ENST00000365375 104 ntBASIC1.31□□□□□ -2.2
KRTCAP3Q53RY4 MIR1323-201ENST00000408090 73 ntBASIC1.31□□□□□ -2.2
KRTCAP3Q53RY4 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
KRTCAP3Q53RY4 Y_RNA.666-201ENST00000516187 112 ntBASIC1.31□□□□□ -2.2
KRTCAP3Q53RY4 MRPS18CP4-201ENST00000535821 231 ntBASIC1.31□□□□□ -2.2
KRTCAP3Q53RY4 AL353770.2-201ENST00000620024 78 ntBASIC1.31□□□□□ -2.2
KRTCAP3Q53RY4 RNA5SP327-201ENST00000362494 101 ntBASIC1.3□□□□□ -2.2
KRTCAP3Q53RY4 Y_RNA.432-201ENST00000384087 111 ntBASIC1.3□□□□□ -2.2
KRTCAP3Q53RY4 SNORA26-201ENST00000391286 122 ntBASIC1.3□□□□□ -2.2
KRTCAP3Q53RY4 RNU4-43P-201ENST00000410628 137 ntBASIC1.3□□□□□ -2.2
KRTCAP3Q53RY4 AC015726.2-201ENST00000620112 122 ntBASIC1.3□□□□□ -2.2
KRTCAP3Q53RY4 AL442644.1-201ENST00000454390 3105 ntBASIC1.3□□□□□ -2.2
KRTCAP3Q53RY4 Y_RNA.66-201ENST00000362862 102 ntBASIC1.29□□□□□ -2.2
KRTCAP3Q53RY4 Y_RNA.240-201ENST00000364469 95 ntBASIC1.29□□□□□ -2.2
KRTCAP3Q53RY4 SNORD61-201ENST00000384252 73 ntBASIC1.29□□□□□ -2.2
KRTCAP3Q53RY4 RNU2-70P-201ENST00000410718 179 ntBASIC1.29□□□□□ -2.2
KRTCAP3Q53RY4 AC074198.2-201ENST00000508153 258 ntBASIC1.29□□□□□ -2.2
KRTCAP3Q53RY4 RNU6-830P-201ENST00000516353 107 ntBASIC1.29□□□□□ -2.2
KRTCAP3Q53RY4 RNA5SP153-201ENST00000516498 76 ntBASIC1.29□□□□□ -2.2
KRTCAP3Q53RY4 SNORA18.7-201ENST00000516910 131 ntBASIC1.29□□□□□ -2.2
KRTCAP3Q53RY4 SNORA74.3-201ENST00000517108 154 ntBASIC1.29□□□□□ -2.2
KRTCAP3Q53RY4 FTX_2.1-201ENST00000618816 94 ntBASIC1.29□□□□□ -2.2
KRTCAP3Q53RY4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
KRTCAP3Q53RY4 Y_RNA.150-201ENST00000363562 102 ntBASIC1.28□□□□□ -2.2
KRTCAP3Q53RY4 RNU6-312P-201ENST00000364629 107 ntBASIC1.28□□□□□ -2.2
KRTCAP3Q53RY4 SNORA70.7-201ENST00000384159 133 ntBASIC1.28□□□□□ -2.2
KRTCAP3Q53RY4 MIR548O-201ENST00000408583 114 ntBASIC1.28□□□□□ -2.2
KRTCAP3Q53RY4 RPL39P39-201ENST00000455840 151 ntBASIC1.28□□□□□ -2.2
KRTCAP3Q53RY4 SNORD123-201ENST00000459473 70 ntBASIC1.28□□□□□ -2.2
KRTCAP3Q53RY4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.28□□□□□ -2.2
KRTCAP3Q53RY4 SNORD111.1-201ENST00000516421 86 ntBASIC1.28□□□□□ -2.2
KRTCAP3Q53RY4 RNU7-25P-201ENST00000516544 62 ntBASIC1.28□□□□□ -2.2
KRTCAP3Q53RY4 RNU6-197P-201ENST00000516680 100 ntBASIC1.28□□□□□ -2.2
KRTCAP3Q53RY4 RNU6-365P-201ENST00000517113 106 ntBASIC1.28□□□□□ -2.2
KRTCAP3Q53RY4 AC007751.1-201ENST00000529260 376 ntBASIC1.28□□□□□ -2.2
KRTCAP3Q53RY4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.28□□□□□ -2.2
KRTCAP3Q53RY4 Y_RNA.23-201ENST00000362496 106 ntBASIC1.27□□□□□ -2.21
KRTCAP3Q53RY4 Y_RNA.547-201ENST00000384654 119 ntBASIC1.27□□□□□ -2.21
KRTCAP3Q53RY4 MIR548A2-201ENST00000384956 97 ntBASIC1.27□□□□□ -2.21
KRTCAP3Q53RY4 MT-TR-201ENST00000387439 65 ntBASIC1.27□□□□□ -2.21
KRTCAP3Q53RY4 PCNPP3-201ENST00000393579 471 ntBASIC1.27□□□□□ -2.21
KRTCAP3Q53RY4 SEPT7P4-201ENST00000437076 306 ntBASIC1.27□□□□□ -2.21
KRTCAP3Q53RY4 Y_RNA.662-201ENST00000516028 97 ntBASIC1.27□□□□□ -2.21
KRTCAP3Q53RY4 RNU6-947P-201ENST00000516264 106 ntBASIC1.27□□□□□ -2.21
KRTCAP3Q53RY4 RNU6-165P-201ENST00000517170 99 ntBASIC1.27□□□□□ -2.21
KRTCAP3Q53RY4 MIR4431-201ENST00000579990 94 ntBASIC1.27□□□□□ -2.21
KRTCAP3Q53RY4 AC097639.2-201ENST00000603159 172 ntBASIC1.27□□□□□ -2.21
KRTCAP3Q53RY4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
KRTCAP3Q53RY4 SNORA79-201ENST00000408376 140 ntBASIC1.26□□□□□ -2.21
KRTCAP3Q53RY4 RNU5E-9P-201ENST00000411164 104 ntBASIC1.26□□□□□ -2.21
KRTCAP3Q53RY4 RNU6-693P-201ENST00000516134 107 ntBASIC1.26□□□□□ -2.21
KRTCAP3Q53RY4 RNU7-43P-201ENST00000516554 64 ntBASIC1.26□□□□□ -2.21
KRTCAP3Q53RY4 RNU6-504P-201ENST00000516568 104 ntBASIC1.26□□□□□ -2.21
KRTCAP3Q53RY4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.26□□□□□ -2.21
KRTCAP3Q53RY4 MIR6078-201ENST00000611069 100 ntBASIC1.26□□□□□ -2.21
KRTCAP3Q53RY4 MIR6504-201ENST00000613520 61 ntBASIC1.26□□□□□ -2.21
KRTCAP3Q53RY4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 RNU6-888P-201ENST00000363010 101 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 SNORD24-201ENST00000383884 75 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 RNU6-643P-201ENST00000384018 107 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 RNU6-886P-201ENST00000384319 105 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 MIR518F-201ENST00000384973 87 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 MIR222-201ENST00000384992 110 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 MIR520C-201ENST00000385005 87 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 MIR518E-201ENST00000385252 88 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 U8.17-201ENST00000391292 132 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 MIR1276-201ENST00000408707 83 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 AC006461.1-201ENST00000412637 326 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 RNU6-1270P-201ENST00000517128 108 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 MIR378D2-201ENST00000580636 98 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 MIR4764-201ENST00000580680 88 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 AC098479.1-201ENST00000609225 154 ntBASIC1.25□□□□□ -2.21
KRTCAP3Q53RY4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTCAP3Q53RY4 Y_RNA.270-201ENST00000364693 104 ntBASIC1.24□□□□□ -2.21
KRTCAP3Q53RY4 Y_RNA.441-201ENST00000384123 112 ntBASIC1.24□□□□□ -2.21
KRTCAP3Q53RY4 RNU6-1135P-201ENST00000411083 103 ntBASIC1.24□□□□□ -2.21
KRTCAP3Q53RY4 RNU1-123P-201ENST00000458950 160 ntBASIC1.24□□□□□ -2.21
KRTCAP3Q53RY4 AL133373.1-201ENST00000497098 94 ntBASIC1.24□□□□□ -2.21
KRTCAP3Q53RY4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.24□□□□□ -2.21
KRTCAP3Q53RY4 RNU4-57P-201ENST00000515980 135 ntBASIC1.24□□□□□ -2.21
KRTCAP3Q53RY4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.24□□□□□ -2.21
KRTCAP3Q53RY4 Y_RNA.116-201ENST00000363292 103 ntBASIC1.23□□□□□ -2.21
KRTCAP3Q53RY4 RNU4-84P-201ENST00000364200 139 ntBASIC1.23□□□□□ -2.21
KRTCAP3Q53RY4 RNU6-978P-201ENST00000364371 103 ntBASIC1.23□□□□□ -2.21
KRTCAP3Q53RY4 SNORA1.2-201ENST00000365189 134 ntBASIC1.23□□□□□ -2.21
KRTCAP3Q53RY4 SNORA1-201ENST00000384107 130 ntBASIC1.23□□□□□ -2.21
KRTCAP3Q53RY4 SNORA25-201ENST00000384384 134 ntBASIC1.23□□□□□ -2.21
KRTCAP3Q53RY4 RNU6-938P-201ENST00000411285 103 ntBASIC1.23□□□□□ -2.21
KRTCAP3Q53RY4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.23□□□□□ -2.21
KRTCAP3Q53RY4 AF228730.3-201ENST00000436691 102 ntBASIC1.23□□□□□ -2.21
KRTCAP3Q53RY4 RNU7-181P-201ENST00000517234 74 ntBASIC1.23□□□□□ -2.21
KRTCAP3Q53RY4 MIR548AR-201ENST00000582191 57 ntBASIC1.23□□□□□ -2.21
KRTCAP3Q53RY4 AL096861.1-201ENST00000610899 123 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 257.2 ms