Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC063976.4-201ENST00000421971 163 ntBASIC1.82□□□□□ -2.12
MMP13P45452 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.82□□□□□ -2.12
MMP13P45452 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.82□□□□□ -2.12
MMP13P45452 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
MMP13P45452 RNU6-1084P-201ENST00000362498 107 ntBASIC1.81□□□□□ -2.12
MMP13P45452 RNU6-647P-201ENST00000364243 107 ntBASIC1.81□□□□□ -2.12
MMP13P45452 Y_RNA.265-201ENST00000364677 108 ntBASIC1.81□□□□□ -2.12
MMP13P45452 snoU2-30.1-201ENST00000365012 70 ntBASIC1.81□□□□□ -2.12
MMP13P45452 RNU6-442P-201ENST00000383968 104 ntBASIC1.81□□□□□ -2.12
MMP13P45452 RNA5SP482-201ENST00000391269 118 ntBASIC1.81□□□□□ -2.12
MMP13P45452 U8.16-201ENST00000391279 133 ntBASIC1.81□□□□□ -2.12
MMP13P45452 RPL23AP63-201ENST00000498752 471 ntBASIC1.81□□□□□ -2.12
MMP13P45452 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.81□□□□□ -2.12
MMP13P45452 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.81□□□□□ -2.12
MMP13P45452 AC022254.1-201ENST00000567857 235 ntBASIC1.81□□□□□ -2.12
MMP13P45452 MIR3618-201ENST00000580330 88 ntBASIC1.81□□□□□ -2.12
MMP13P45452 MIR6845-201ENST00000613182 61 ntBASIC1.81□□□□□ -2.12
MMP13P45452 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
MMP13P45452 MTND5P18-201ENST00000445624 1801 ntBASIC1.8□□□□□ -2.12
MMP13P45452 RNU6-296P-201ENST00000384608 107 ntBASIC1.8□□□□□ -2.12
MMP13P45452 MIR548A1-201ENST00000385041 97 ntBASIC1.8□□□□□ -2.12
MMP13P45452 MT-TI-201ENST00000387365 69 ntBASIC1.8□□□□□ -2.12
MMP13P45452 RNU11-5P-201ENST00000391216 129 ntBASIC1.8□□□□□ -2.12
MMP13P45452 MIR1289-2-201ENST00000408360 111 ntBASIC1.8□□□□□ -2.12
MMP13P45452 RNA5SP501-201ENST00000410990 112 ntBASIC1.8□□□□□ -2.12
MMP13P45452 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.8□□□□□ -2.12
MMP13P45452 RNU6-240P-201ENST00000516098 97 ntBASIC1.8□□□□□ -2.12
MMP13P45452 RNU6-295P-201ENST00000516901 104 ntBASIC1.8□□□□□ -2.12
MMP13P45452 SUB1P4-201ENST00000566062 339 ntBASIC1.8□□□□□ -2.12
MMP13P45452 MIR4713-201ENST00000582691 75 ntBASIC1.8□□□□□ -2.12
MMP13P45452 HSPE1P19-201ENST00000603327 295 ntBASIC1.8□□□□□ -2.12
MMP13P45452 AC069114.2-201ENST00000604699 304 ntBASIC1.8□□□□□ -2.12
MMP13P45452 AC025166.1-201ENST00000612411 163 ntBASIC1.8□□□□□ -2.12
MMP13P45452 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.8□□□□□ -2.12
MMP13P45452 AC084768.2-201ENST00000622736 221 ntBASIC1.8□□□□□ -2.12
MMP13P45452 U6.95-201ENST00000636931 70 ntBASIC1.8□□□□□ -2.12
MMP13P45452 RNU6-349P-201ENST00000362402 107 ntBASIC1.79□□□□□ -2.12
MMP13P45452 SNORD115-28-201ENST00000363931 81 ntBASIC1.79□□□□□ -2.12
MMP13P45452 SNORD14E-201ENST00000364009 85 ntBASIC1.79□□□□□ -2.12
MMP13P45452 SNORA22-201ENST00000383907 134 ntBASIC1.79□□□□□ -2.12
MMP13P45452 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
MMP13P45452 MIR1263-201ENST00000408324 86 ntBASIC1.79□□□□□ -2.12
MMP13P45452 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
MMP13P45452 AL670379.3-201ENST00000605040 251 ntBASIC1.79□□□□□ -2.12
MMP13P45452 RNU6-755P-201ENST00000364400 103 ntBASIC1.78□□□□□ -2.12
MMP13P45452 Y_RNA.440-201ENST00000384120 114 ntBASIC1.78□□□□□ -2.12
MMP13P45452 RNU6-424P-201ENST00000384367 105 ntBASIC1.78□□□□□ -2.12
MMP13P45452 AC099513.1-201ENST00000490423 301 ntBASIC1.78□□□□□ -2.12
MMP13P45452 RNA5SP168-201ENST00000516642 112 ntBASIC1.78□□□□□ -2.12
MMP13P45452 AC134878.1-201ENST00000619901 243 ntBASIC1.78□□□□□ -2.12
MMP13P45452 AC015726.2-201ENST00000620112 122 ntBASIC1.78□□□□□ -2.12
MMP13P45452 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.78□□□□□ -2.12
MMP13P45452 RNU6-1298P-201ENST00000362456 101 ntBASIC1.77□□□□□ -2.13
MMP13P45452 RNU6-112P-201ENST00000363599 104 ntBASIC1.77□□□□□ -2.13
MMP13P45452 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
MMP13P45452 Y_RNA.336-201ENST00000365307 109 ntBASIC1.77□□□□□ -2.13
MMP13P45452 SNORA2.2-201ENST00000365473 135 ntBASIC1.77□□□□□ -2.13
MMP13P45452 SNORA48.1-201ENST00000390879 135 ntBASIC1.77□□□□□ -2.13
MMP13P45452 AC093850.1-201ENST00000454121 251 ntBASIC1.77□□□□□ -2.13
MMP13P45452 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.77□□□□□ -2.13
MMP13P45452 Y_RNA.714-201ENST00000517065 90 ntBASIC1.77□□□□□ -2.13
MMP13P45452 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MMP13P45452 RNU6-1189P-201ENST00000383958 107 ntBASIC1.76□□□□□ -2.13
MMP13P45452 RNU6-147P-201ENST00000383983 107 ntBASIC1.76□□□□□ -2.13
MMP13P45452 Y_RNA.410-201ENST00000383992 113 ntBASIC1.76□□□□□ -2.13
MMP13P45452 RNU6-163P-201ENST00000384396 106 ntBASIC1.76□□□□□ -2.13
MMP13P45452 SNORD116-21-201ENST00000384507 92 ntBASIC1.76□□□□□ -2.13
MMP13P45452 Y_RNA.528-201ENST00000384575 108 ntBASIC1.76□□□□□ -2.13
MMP13P45452 Y_RNA.549-201ENST00000384657 102 ntBASIC1.76□□□□□ -2.13
MMP13P45452 MIR548A3-201ENST00000385297 97 ntBASIC1.76□□□□□ -2.13
MMP13P45452 SNORA26.9-201ENST00000391322 122 ntBASIC1.76□□□□□ -2.13
MMP13P45452 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.76□□□□□ -2.13
MMP13P45452 Y_RNA.649-201ENST00000459077 103 ntBASIC1.76□□□□□ -2.13
MMP13P45452 RPS26P48-201ENST00000491713 339 ntBASIC1.76□□□□□ -2.13
MMP13P45452 RNU7-28P-201ENST00000516759 62 ntBASIC1.76□□□□□ -2.13
MMP13P45452 AL137067.1-201ENST00000615933 120 ntBASIC1.76□□□□□ -2.13
MMP13P45452 RNU6-1104P-201ENST00000384723 104 ntBASIC1.75□□□□□ -2.13
MMP13P45452 RNU6-1031P-201ENST00000384773 107 ntBASIC1.75□□□□□ -2.13
MMP13P45452 MIR802-201ENST00000390235 94 ntBASIC1.75□□□□□ -2.13
MMP13P45452 MTATP6P21-201ENST00000440681 189 ntBASIC1.75□□□□□ -2.13
MMP13P45452 CYCTP-201ENST00000504253 315 ntBASIC1.75□□□□□ -2.13
MMP13P45452 RNU7-181P-201ENST00000517234 74 ntBASIC1.75□□□□□ -2.13
MMP13P45452 AP003484.1-201ENST00000530974 250 ntBASIC1.75□□□□□ -2.13
MMP13P45452 MIR3613-201ENST00000579844 87 ntBASIC1.75□□□□□ -2.13
MMP13P45452 AC021506.2-201ENST00000612354 169 ntBASIC1.75□□□□□ -2.13
MMP13P45452 AL035470.1-201ENST00000622571 220 ntBASIC1.75□□□□□ -2.13
MMP13P45452 MIR526A1-201ENST00000384897 85 ntBASIC1.74□□□□□ -2.13
MMP13P45452 RNA5SP100-201ENST00000410903 110 ntBASIC1.74□□□□□ -2.13
MMP13P45452 RNA5SP59-201ENST00000410922 110 ntBASIC1.74□□□□□ -2.13
MMP13P45452 AC015922.2-201ENST00000435593 184 ntBASIC1.74□□□□□ -2.13
MMP13P45452 RNA5SP57-201ENST00000459463 123 ntBASIC1.74□□□□□ -2.13
MMP13P45452 RNU6-250P-201ENST00000516958 103 ntBASIC1.74□□□□□ -2.13
MMP13P45452 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.74□□□□□ -2.13
MMP13P45452 AC022523.2-201ENST00000561045 150 ntBASIC1.74□□□□□ -2.13
MMP13P45452 MIR8081-201ENST00000611533 95 ntBASIC1.74□□□□□ -2.13
MMP13P45452 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.74□□□□□ -2.13
MMP13P45452 AL121890.5-201ENST00000620848 304 ntBASIC1.74□□□□□ -2.13
MMP13P45452 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.74□□□□□ -2.13
MMP13P45452 AC091932.4-201ENST00000623386 200 ntBASIC1.74□□□□□ -2.13
MMP13P45452 AC027279.3-201ENST00000625055 122 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms