Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 Y_RNA.662-201ENST00000516028 97 ntBASIC1.01□□□□□ -2.25
HOXC4P09017 Y_RNA.666-201ENST00000516187 112 ntBASIC1.01□□□□□ -2.25
HOXC4P09017 RNU7-28P-201ENST00000516759 62 ntBASIC1.01□□□□□ -2.25
HOXC4P09017 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.01□□□□□ -2.25
HOXC4P09017 MIR4452-201ENST00000583004 71 ntBASIC1.01□□□□□ -2.25
HOXC4P09017 AC120024.3-201ENST00000603167 156 ntBASIC1.01□□□□□ -2.25
HOXC4P09017 RNU6-728P-201ENST00000365375 104 ntBASIC1□□□□□ -2.25
HOXC4P09017 SNORD114-22-201ENST00000365423 72 ntBASIC1□□□□□ -2.25
HOXC4P09017 RNU6-1336P-201ENST00000383886 109 ntBASIC1□□□□□ -2.25
HOXC4P09017 SNORA22-201ENST00000383907 134 ntBASIC1□□□□□ -2.25
HOXC4P09017 RNU6-804P-201ENST00000384286 107 ntBASIC1□□□□□ -2.25
HOXC4P09017 RNU6-163P-201ENST00000384396 106 ntBASIC1□□□□□ -2.25
HOXC4P09017 SNORA22C-201ENST00000384614 134 ntBASIC1□□□□□ -2.25
HOXC4P09017 AC006461.1-201ENST00000412637 326 ntBASIC1□□□□□ -2.25
HOXC4P09017 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1□□□□□ -2.25
HOXC4P09017 PGBD4P5-201ENST00000445958 426 ntBASIC1□□□□□ -2.25
HOXC4P09017 RNU7-12P-201ENST00000516030 62 ntBASIC1□□□□□ -2.25
HOXC4P09017 SUMO2P16-201ENST00000519475 264 ntBASIC1□□□□□ -2.25
HOXC4P09017 SNORA28-201ENST00000606769 126 ntBASIC1□□□□□ -2.25
HOXC4P09017 MIR8065-201ENST00000620577 100 ntBASIC1□□□□□ -2.25
HOXC4P09017 Y_RNA.8-201ENST00000362353 102 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 Y_RNA.23-201ENST00000362496 106 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 Y_RNA.66-201ENST00000362862 102 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 RNY1P11-201ENST00000363759 113 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 Y_RNA.180-201ENST00000363867 113 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 RNU6-268P-201ENST00000364174 107 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 RNU6-312P-201ENST00000364629 107 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 Y_RNA.634-201ENST00000364811 113 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 RNU6-1138P-201ENST00000365359 106 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 RNU6-1130P-201ENST00000365434 107 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 RNY3P5-201ENST00000384127 102 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 RNU6-950P-201ENST00000384651 107 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 MIR526A1-201ENST00000384897 85 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 MIR513A1-201ENST00000385138 129 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 MIR660-201ENST00000385235 97 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 RNU6-394P-201ENST00000410735 107 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.99□□□□□ -2.25
HOXC4P09017 RPS23P4-201ENST00000487908 423 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 CYCTP-201ENST00000504253 315 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 RNU6-1299P-201ENST00000516316 100 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 RNU6-113P-201ENST00000516653 101 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 RNU6-255P-201ENST00000516957 105 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 MTND5P41-201ENST00000517498 206 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 AC007751.1-201ENST00000529260 376 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 AL512310.8-201ENST00000550183 120 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 CYP3A52P-201ENST00000563326 91 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 MIR4431-201ENST00000579990 94 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 MIR6857-201ENST00000613267 93 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 AC106754.2-201ENST00000623006 233 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 SNORD3E-202ENST00000627253 216 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 AC021753.1-201ENST00000635724 168 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 MIR3658-201ENST00000636291 56 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 MIR6767-201ENST00000637302 66 ntBASIC0.99□□□□□ -2.25
HOXC4P09017 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
HOXC4P09017 RNU6-1123P-201ENST00000362347 106 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 Y_RNA.272-201ENST00000364696 102 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 snoU2-30.1-201ENST00000365012 70 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 RNU6-643P-201ENST00000384018 107 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 Y_RNA.432-201ENST00000384087 111 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 Y_RNA.441-201ENST00000384123 112 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 SNORA70.7-201ENST00000384159 133 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 SNORD61-201ENST00000384252 73 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 MIR548A2-201ENST00000384956 97 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 MIR532-201ENST00000385025 91 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 MIR516B2-201ENST00000385190 85 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 RNU4-43P-201ENST00000410628 137 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 AC023449.1-201ENST00000454464 154 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 RNU6-197P-201ENST00000516680 100 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 AL365434.2-201ENST00000607979 234 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 AL513423.1-201ENST00000621695 132 ntBASIC0.98□□□□□ -2.25
HOXC4P09017 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
HOXC4P09017 RNA5SP327-201ENST00000362494 101 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 RNU6-833P-201ENST00000363486 107 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 SNORD14E-201ENST00000364009 85 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 RNU4-84P-201ENST00000364200 139 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 RNU6-978P-201ENST00000364371 103 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 Y_RNA.398-201ENST00000383952 99 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 SNORA1-201ENST00000384107 130 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 RNU2-70P-201ENST00000410718 179 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 RNU2-55P-201ENST00000411146 174 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 RNU7-25P-201ENST00000516544 62 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 RNU6-1270P-201ENST00000517128 108 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 AC090142.3-201ENST00000519012 385 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 MIR3144-201ENST00000579460 79 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 AC006441.5-201ENST00000612680 209 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 AC027279.3-201ENST00000625055 122 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.97□□□□□ -2.25
HOXC4P09017 AL442644.1-201ENST00000454390 3105 ntBASIC0.97□□□□□ -2.25
HOXC4P09017 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
HOXC4P09017 RNU6-774P-201ENST00000363238 107 ntBASIC0.96□□□□□ -2.26
HOXC4P09017 Y_RNA.116-201ENST00000363292 103 ntBASIC0.96□□□□□ -2.26
HOXC4P09017 Y_RNA.170-201ENST00000363746 110 ntBASIC0.96□□□□□ -2.26
HOXC4P09017 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
HOXC4P09017 RNU6-442P-201ENST00000383968 104 ntBASIC0.96□□□□□ -2.26
HOXC4P09017 RNU6-768P-201ENST00000384683 107 ntBASIC0.96□□□□□ -2.26
HOXC4P09017 MIR518F-201ENST00000384973 87 ntBASIC0.96□□□□□ -2.26
HOXC4P09017 MIR891A-201ENST00000401237 79 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 357.2 ms