Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 Y_RNA.370-201ENST00000365589 108 ntBASIC3.1□□□□□ -1.91
PCDHB9Q9Y5E1 RN7SKP192-201ENST00000411291 327 ntBASIC3.1□□□□□ -1.91
PCDHB9Q9Y5E1 AC096949.1-201ENST00000412047 152 ntBASIC3.1□□□□□ -1.91
PCDHB9Q9Y5E1 RNA5SP356-201ENST00000515972 94 ntBASIC3.1□□□□□ -1.91
PCDHB9Q9Y5E1 RNU7-53P-201ENST00000516705 60 ntBASIC3.1□□□□□ -1.91
PCDHB9Q9Y5E1 MIR3152-201ENST00000579801 74 ntBASIC3.1□□□□□ -1.91
PCDHB9Q9Y5E1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHB9Q9Y5E1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PCDHB9Q9Y5E1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHB9Q9Y5E1 AC096644.4-201ENST00000563417 2912 ntBASIC3.09□□□□□ -1.91
PCDHB9Q9Y5E1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PCDHB9Q9Y5E1 MIR22-201ENST00000362190 85 ntBASIC3.09□□□□□ -1.91
PCDHB9Q9Y5E1 SNORA22.1-201ENST00000362701 134 ntBASIC3.09□□□□□ -1.91
PCDHB9Q9Y5E1 SNORA24-201ENST00000384096 131 ntBASIC3.09□□□□□ -1.91
PCDHB9Q9Y5E1 MIR136-201ENST00000385207 82 ntBASIC3.09□□□□□ -1.91
PCDHB9Q9Y5E1 RNA5SP465-201ENST00000391195 109 ntBASIC3.09□□□□□ -1.91
PCDHB9Q9Y5E1 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.09□□□□□ -1.91
PCDHB9Q9Y5E1 AL353813.1-201ENST00000440700 253 ntBASIC3.09□□□□□ -1.91
PCDHB9Q9Y5E1 RNU2-13P-201ENST00000515909 113 ntBASIC3.09□□□□□ -1.91
PCDHB9Q9Y5E1 SCARNA16.3-201ENST00000516595 184 ntBASIC3.09□□□□□ -1.91
PCDHB9Q9Y5E1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PCDHB9Q9Y5E1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 Y_RNA.290-201ENST00000364879 114 ntBASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 MIR605-201ENST00000385078 83 ntBASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 AC004941.2-201ENST00000427009 228 ntBASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 RPS29P29-201ENST00000456396 171 ntBASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 RNVU1-2-201ENST00000516326 135 ntBASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 MIR3162-201ENST00000581818 82 ntBASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 AL590808.1-201ENST00000618696 141 ntBASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PCDHB9Q9Y5E1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 RNU6-1134P-201ENST00000365156 101 ntBASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 SNORA54-201ENST00000384281 123 ntBASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 MIR520A-201ENST00000384862 85 ntBASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 SNORA26.6-201ENST00000391256 115 ntBASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 HMGN2P3-201ENST00000433603 273 ntBASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 HMGN2P5-201ENST00000436882 273 ntBASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 RNU7-67P-201ENST00000459003 62 ntBASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 RNU7-61P-201ENST00000515897 61 ntBASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 RNA5SP367-201ENST00000516557 118 ntBASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.07□□□□□ -1.92
PCDHB9Q9Y5E1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 RNU6-170P-201ENST00000362832 104 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 Y_RNA.470-201ENST00000384307 117 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 RNU6-1152P-201ENST00000384576 107 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 SNORA48.1-201ENST00000390879 135 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 RNA5SP261-201ENST00000410536 106 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 UBBP3-201ENST00000445497 241 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 AC093850.1-201ENST00000454121 251 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 RN7SL20P-201ENST00000488827 297 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 RNU6-958P-201ENST00000516995 106 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 DNAJC19P9-201ENST00000555084 351 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 SUB1P4-201ENST00000566062 339 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 MIR3945-201ENST00000581853 98 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 MIR548AE2-201ENST00000583456 67 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 AC012531.4-201ENST00000616509 177 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 MIR1245B-201ENST00000636115 69 ntBASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHB9Q9Y5E1 RNU1-109P-201ENST00000383960 147 ntBASIC3.05□□□□□ -1.92
PCDHB9Q9Y5E1 Y_RNA.430-201ENST00000384081 110 ntBASIC3.05□□□□□ -1.92
PCDHB9Q9Y5E1 MIR518A2-201ENST00000384966 87 ntBASIC3.05□□□□□ -1.92
PCDHB9Q9Y5E1 RNU6-679P-201ENST00000391003 106 ntBASIC3.05□□□□□ -1.92
PCDHB9Q9Y5E1 RNU6-1275P-201ENST00000391087 107 ntBASIC3.05□□□□□ -1.92
PCDHB9Q9Y5E1 SNORD77B-201ENST00000391112 67 ntBASIC3.05□□□□□ -1.92
PCDHB9Q9Y5E1 RNU7-73P-201ENST00000458743 63 ntBASIC3.05□□□□□ -1.92
PCDHB9Q9Y5E1 RNA5SP385-201ENST00000515947 110 ntBASIC3.05□□□□□ -1.92
PCDHB9Q9Y5E1 RNU6-795P-201ENST00000516323 103 ntBASIC3.05□□□□□ -1.92
PCDHB9Q9Y5E1 RNA5SP437-201ENST00000517249 129 ntBASIC3.05□□□□□ -1.92
PCDHB9Q9Y5E1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHB9Q9Y5E1 AL513423.1-201ENST00000621695 132 ntBASIC3.05□□□□□ -1.92
PCDHB9Q9Y5E1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHB9Q9Y5E1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 AC073325.2-201ENST00000339545 159 ntBASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 Y_RNA.377-201ENST00000365644 108 ntBASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 RNU6-616P-201ENST00000384353 107 ntBASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 RNA5SP508-201ENST00000411327 119 ntBASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 RNU6-592P-201ENST00000411333 103 ntBASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 MIR1270-201ENST00000459320 83 ntBASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 RPL23AP63-201ENST00000498752 471 ntBASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 RNA5SP33-201ENST00000516687 98 ntBASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 SNORA31.26-201ENST00000517250 137 ntBASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 AC021506.2-201ENST00000612354 169 ntBASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 AC007318.2-201ENST00000620999 243 ntBASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 MIR6717-201ENST00000622747 73 ntBASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PCDHB9Q9Y5E1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 204.7 ms