Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGC3Q9UN70 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGC3Q9UN70 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGC3Q9UN70 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHGC3Q9UN70 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGC3Q9UN70 SNORA54-201ENST00000384281 123 ntBASIC3.24□□□□□ -1.89
PCDHGC3Q9UN70 Y_RNA.537-201ENST00000384626 109 ntBASIC3.24□□□□□ -1.89
PCDHGC3Q9UN70 RNU6-813P-201ENST00000384691 107 ntBASIC3.24□□□□□ -1.89
PCDHGC3Q9UN70 RNA5SP465-201ENST00000391195 109 ntBASIC3.24□□□□□ -1.89
PCDHGC3Q9UN70 RNA5SP225-201ENST00000410874 135 ntBASIC3.24□□□□□ -1.89
PCDHGC3Q9UN70 MIR5588-201ENST00000581890 63 ntBASIC3.24□□□□□ -1.89
PCDHGC3Q9UN70 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGC3Q9UN70 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGC3Q9UN70 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGC3Q9UN70 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHGC3Q9UN70 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGC3Q9UN70 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGC3Q9UN70 SNORA38.1-201ENST00000364172 131 ntBASIC3.23□□□□□ -1.89
PCDHGC3Q9UN70 Y_RNA.354-201ENST00000365448 111 ntBASIC3.23□□□□□ -1.89
PCDHGC3Q9UN70 RNU6-979P-201ENST00000383896 107 ntBASIC3.23□□□□□ -1.89
PCDHGC3Q9UN70 Y_RNA.467-201ENST00000384297 102 ntBASIC3.23□□□□□ -1.89
PCDHGC3Q9UN70 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.23□□□□□ -1.89
PCDHGC3Q9UN70 UQCRHP3-201ENST00000451503 251 ntBASIC3.23□□□□□ -1.89
PCDHGC3Q9UN70 SNORD123-201ENST00000459473 70 ntBASIC3.23□□□□□ -1.89
PCDHGC3Q9UN70 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGC3Q9UN70 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGC3Q9UN70 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 Y_RNA.73-201ENST00000362910 113 ntBASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 Y_RNA.426-201ENST00000384068 113 ntBASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 SNORA32-201ENST00000384072 121 ntBASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 RNA5SP274-201ENST00000410484 108 ntBASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 BX510359.1-201ENST00000456973 237 ntBASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 MIR1270-201ENST00000459320 83 ntBASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 snoU13.16-201ENST00000459350 104 ntBASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 RNA5SP481-201ENST00000516814 122 ntBASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 AC007179.3-201ENST00000604976 235 ntBASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 AC022202.1-201ENST00000613515 211 ntBASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGC3Q9UN70 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PCDHGC3Q9UN70 MIR22-201ENST00000362190 85 ntBASIC3.21□□□□□ -1.9
PCDHGC3Q9UN70 SNORD58A-201ENST00000383875 65 ntBASIC3.21□□□□□ -1.9
PCDHGC3Q9UN70 RNU7-171P-201ENST00000459581 62 ntBASIC3.21□□□□□ -1.9
PCDHGC3Q9UN70 AC008885.1-201ENST00000514930 301 ntBASIC3.21□□□□□ -1.9
PCDHGC3Q9UN70 SCARNA16.3-201ENST00000516595 184 ntBASIC3.21□□□□□ -1.9
PCDHGC3Q9UN70 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGC3Q9UN70 MIR4709-201ENST00000577272 72 ntBASIC3.21□□□□□ -1.9
PCDHGC3Q9UN70 MIR548AR-201ENST00000582191 57 ntBASIC3.21□□□□□ -1.9
PCDHGC3Q9UN70 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGC3Q9UN70 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PCDHGC3Q9UN70 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGC3Q9UN70 AC093831.2-201ENST00000624393 3427 ntBASIC3.21□□□□□ -1.9
PCDHGC3Q9UN70 SNORA38-201ENST00000363946 132 ntBASIC3.2□□□□□ -1.9
PCDHGC3Q9UN70 RNU1-148P-201ENST00000384472 162 ntBASIC3.2□□□□□ -1.9
PCDHGC3Q9UN70 MIR597-201ENST00000384968 97 ntBASIC3.2□□□□□ -1.9
PCDHGC3Q9UN70 MIR660-201ENST00000385235 97 ntBASIC3.2□□□□□ -1.9
PCDHGC3Q9UN70 Z96811.1-201ENST00000445880 108 ntBASIC3.2□□□□□ -1.9
PCDHGC3Q9UN70 RN7SL75P-201ENST00000461926 281 ntBASIC3.2□□□□□ -1.9
PCDHGC3Q9UN70 RNU7-2P-201ENST00000516096 62 ntBASIC3.2□□□□□ -1.9
PCDHGC3Q9UN70 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.2□□□□□ -1.9
PCDHGC3Q9UN70 MIR4666B-201ENST00000578142 81 ntBASIC3.2□□□□□ -1.9
PCDHGC3Q9UN70 MIR4668-201ENST00000582284 70 ntBASIC3.2□□□□□ -1.9
PCDHGC3Q9UN70 AC007318.2-201ENST00000620999 243 ntBASIC3.2□□□□□ -1.9
PCDHGC3Q9UN70 AP000648.3-201ENST00000623539 4507 ntBASIC3.2□□□□□ -1.9
PCDHGC3Q9UN70 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHGC3Q9UN70 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PCDHGC3Q9UN70 RNA5SP374-201ENST00000362939 125 ntBASIC3.19□□□□□ -1.9
PCDHGC3Q9UN70 SNORD38.1-201ENST00000363863 68 ntBASIC3.19□□□□□ -1.9
PCDHGC3Q9UN70 RNU6-219P-201ENST00000364728 107 ntBASIC3.19□□□□□ -1.9
PCDHGC3Q9UN70 RNU6-913P-201ENST00000390913 95 ntBASIC3.19□□□□□ -1.9
PCDHGC3Q9UN70 U8.15-201ENST00000390947 134 ntBASIC3.19□□□□□ -1.9
PCDHGC3Q9UN70 AC093850.1-201ENST00000454121 251 ntBASIC3.19□□□□□ -1.9
PCDHGC3Q9UN70 RN7SL633P-201ENST00000488974 297 ntBASIC3.19□□□□□ -1.9
PCDHGC3Q9UN70 MIR8057-201ENST00000620957 69 ntBASIC3.19□□□□□ -1.9
PCDHGC3Q9UN70 MIR3651-201ENST00000630427 90 ntBASIC3.19□□□□□ -1.9
PCDHGC3Q9UN70 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGC3Q9UN70 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHGC3Q9UN70 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGC3Q9UN70 SNORD46.1-201ENST00000364139 104 ntBASIC3.18□□□□□ -1.9
PCDHGC3Q9UN70 RNU6-279P-201ENST00000391297 101 ntBASIC3.18□□□□□ -1.9
PCDHGC3Q9UN70 RNU6-1190P-201ENST00000410811 104 ntBASIC3.18□□□□□ -1.9
PCDHGC3Q9UN70 Y_RNA.620-201ENST00000411009 88 ntBASIC3.18□□□□□ -1.9
PCDHGC3Q9UN70 AC006023.1-201ENST00000603944 259 ntBASIC3.18□□□□□ -1.9
PCDHGC3Q9UN70 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PCDHGC3Q9UN70 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGC3Q9UN70 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGC3Q9UN70 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHGC3Q9UN70 SNORA71.1-201ENST00000364523 117 ntBASIC3.17□□□□□ -1.9
PCDHGC3Q9UN70 SNORA48.1-201ENST00000390879 135 ntBASIC3.17□□□□□ -1.9
PCDHGC3Q9UN70 SNORD28B-201ENST00000390993 75 ntBASIC3.17□□□□□ -1.9
PCDHGC3Q9UN70 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.17□□□□□ -1.9
PCDHGC3Q9UN70 AC090844.1-201ENST00000422019 156 ntBASIC3.17□□□□□ -1.9
PCDHGC3Q9UN70 AL445685.2-201ENST00000422551 342 ntBASIC3.17□□□□□ -1.9
PCDHGC3Q9UN70 AC021506.2-201ENST00000612354 169 ntBASIC3.17□□□□□ -1.9
PCDHGC3Q9UN70 MIR376B-201ENST00000614515 100 ntBASIC3.17□□□□□ -1.9
PCDHGC3Q9UN70 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGC3Q9UN70 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGC3Q9UN70 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 273.5 ms