Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.53□□□□□ -2.32
TM9SF3Q9HD45 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.53□□□□□ -2.32
TM9SF3Q9HD45 MIR5087-201ENST00000635826 76 ntBASIC0.53□□□□□ -2.32
TM9SF3Q9HD45 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.26-201ENST00000362539 101 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 SNORD45.3-201ENST00000363836 72 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 SNORD113.3-201ENST00000364630 78 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 RNU6-806P-201ENST00000365147 105 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 SNORD42.2-201ENST00000365570 69 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 SNORA51.10-201ENST00000384418 136 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 MIR215-201ENST00000384858 110 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 AC090844.1-201ENST00000422019 156 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.639-201ENST00000458981 102 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.637-201ENST00000459424 114 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 RNU6-1110P-201ENST00000516462 101 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.715-201ENST00000517082 110 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 AC011195.1-201ENST00000578177 177 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 AL049861.1-201ENST00000603130 150 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 MIR924-201ENST00000638017 53 ntBASIC0.52□□□□□ -2.33
TM9SF3Q9HD45 RNU6-674P-201ENST00000363831 107 ntBASIC0.51□□□□□ -2.33
TM9SF3Q9HD45 RNU4-10P-201ENST00000364383 140 ntBASIC0.51□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.370-201ENST00000365589 108 ntBASIC0.51□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.395-201ENST00000383945 109 ntBASIC0.51□□□□□ -2.33
TM9SF3Q9HD45 RNU6-474P-201ENST00000384243 107 ntBASIC0.51□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.526-201ENST00000384572 110 ntBASIC0.51□□□□□ -2.33
TM9SF3Q9HD45 RNU6-823P-201ENST00000391042 103 ntBASIC0.51□□□□□ -2.33
TM9SF3Q9HD45 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.51□□□□□ -2.33
TM9SF3Q9HD45 RNU6-830P-201ENST00000516353 107 ntBASIC0.51□□□□□ -2.33
TM9SF3Q9HD45 RNU6-369P-201ENST00000362515 102 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.389-201ENST00000383924 113 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 RNU6-662P-201ENST00000384253 104 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 RNU6-125P-201ENST00000384505 107 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.509-201ENST00000384506 99 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.569-201ENST00000384749 103 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 RNU6-1067P-201ENST00000384752 107 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 SNORD115-46-201ENST00000390982 71 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 SNORD111-201ENST00000408139 94 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 RNU6-613P-201ENST00000410412 108 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 SNORD83.1-201ENST00000411362 77 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 AC244098.3-201ENST00000424803 96 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 MTATP6P23-201ENST00000440153 476 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 RNU6-1170P-201ENST00000515974 106 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 RNU6-475P-201ENST00000516073 104 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.666-201ENST00000516187 112 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 RNU7-149P-201ENST00000516739 59 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.713-201ENST00000517013 96 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 MIR2681-201ENST00000581814 105 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 AC087685.1-201ENST00000587507 141 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 LARP7P1-201ENST00000605576 316 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 AC006441.5-201ENST00000612680 209 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 AC090971.5-201ENST00000621102 293 ntBASIC0.5□□□□□ -2.33
TM9SF3Q9HD45 RNU6-1205P-201ENST00000363625 106 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 RNU6-899P-201ENST00000363947 107 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.216-201ENST00000364205 93 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.258-201ENST00000364613 105 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.547-201ENST00000384654 119 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 MIR548O-201ENST00000408583 114 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 RNA5SP222-201ENST00000411039 105 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 RPL21P38-201ENST00000418090 167 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 AL117351.2-201ENST00000513571 157 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 RNA5SP330-201ENST00000517096 96 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 C8orf59P2-201ENST00000603441 271 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 uc_338.6-201ENST00000613544 171 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 AC243994.1-201ENST00000618627 109 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 AC090574.1-201ENST00000623186 233 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 AC022140.2-201ENST00000623500 188 ntBASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.49□□□□□ -2.33
TM9SF3Q9HD45 snoU2_19.2-201ENST00000363024 80 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.115-201ENST00000363272 98 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.138-201ENST00000363462 102 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 RNA5SP457-201ENST00000363657 124 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.183-201ENST00000363882 113 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 RNU6-945P-201ENST00000383947 107 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.541-201ENST00000384640 113 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.572-201ENST00000384757 98 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 SNORD105-201ENST00000386910 85 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 MT-TD-201ENST00000387419 68 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 MIR1827-201ENST00000408549 66 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 ELOCP20-201ENST00000422460 345 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 AL358176.2-201ENST00000425769 204 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 BTF3P11-201ENST00000426582 477 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 MIR2115-201ENST00000516657 100 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 RNU11-2P-201ENST00000516898 142 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 AC007751.1-201ENST00000529260 376 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 AC243829.6-201ENST00000612652 106 ntBASIC0.48□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.16-201ENST00000362421 102 ntBASIC0.47□□□□□ -2.33
TM9SF3Q9HD45 RNU4-90P-201ENST00000362773 141 ntBASIC0.47□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.136-201ENST00000363444 102 ntBASIC0.47□□□□□ -2.33
TM9SF3Q9HD45 RNU6-396P-201ENST00000365369 105 ntBASIC0.47□□□□□ -2.33
TM9SF3Q9HD45 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
TM9SF3Q9HD45 SNORA36.2-201ENST00000384004 127 ntBASIC0.47□□□□□ -2.33
TM9SF3Q9HD45 Y_RNA.537-201ENST00000384626 109 ntBASIC0.47□□□□□ -2.33
TM9SF3Q9HD45 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
TM9SF3Q9HD45 MTND5P22-201ENST00000458380 195 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms