Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RNU6-997P-201ENST00000384725 107 ntBASIC1.72□□□□□ -2.13
VPS50Q96JG6 MIR518F-201ENST00000384973 87 ntBASIC1.72□□□□□ -2.13
VPS50Q96JG6 MIR513A1-201ENST00000385138 129 ntBASIC1.72□□□□□ -2.13
VPS50Q96JG6 MIR764-201ENST00000390811 85 ntBASIC1.72□□□□□ -2.13
VPS50Q96JG6 MIR548O-201ENST00000408583 114 ntBASIC1.72□□□□□ -2.13
VPS50Q96JG6 SNRPGP13-201ENST00000442212 177 ntBASIC1.72□□□□□ -2.13
VPS50Q96JG6 HMGN2P32-201ENST00000444648 269 ntBASIC1.72□□□□□ -2.13
VPS50Q96JG6 AC005840.1-201ENST00000498412 377 ntBASIC1.72□□□□□ -2.13
VPS50Q96JG6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.72□□□□□ -2.13
VPS50Q96JG6 RNU7-121P-201ENST00000516604 62 ntBASIC1.72□□□□□ -2.13
VPS50Q96JG6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS50Q96JG6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS50Q96JG6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
VPS50Q96JG6 RNU6-1062P-201ENST00000383908 107 ntBASIC1.71□□□□□ -2.14
VPS50Q96JG6 SNORD116-18-201ENST00000383961 92 ntBASIC1.71□□□□□ -2.14
VPS50Q96JG6 Y_RNA.547-201ENST00000384654 119 ntBASIC1.71□□□□□ -2.14
VPS50Q96JG6 RNU6-917P-201ENST00000516294 104 ntBASIC1.71□□□□□ -2.14
VPS50Q96JG6 RNU6-504P-201ENST00000516568 104 ntBASIC1.71□□□□□ -2.14
VPS50Q96JG6 AC015726.2-201ENST00000620112 122 ntBASIC1.71□□□□□ -2.14
VPS50Q96JG6 AC084768.2-201ENST00000622736 221 ntBASIC1.71□□□□□ -2.14
VPS50Q96JG6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
VPS50Q96JG6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.71□□□□□ -2.14
VPS50Q96JG6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.7□□□□□ -2.14
VPS50Q96JG6 RNU6-888P-201ENST00000363010 101 ntBASIC1.7□□□□□ -2.14
VPS50Q96JG6 RNY1P11-201ENST00000363759 113 ntBASIC1.7□□□□□ -2.14
VPS50Q96JG6 Y_RNA.337-201ENST00000365312 102 ntBASIC1.7□□□□□ -2.14
VPS50Q96JG6 RNA5SP259-201ENST00000365541 109 ntBASIC1.7□□□□□ -2.14
VPS50Q96JG6 Y_RNA.521-201ENST00000384560 114 ntBASIC1.7□□□□□ -2.14
VPS50Q96JG6 AC092991.1-201ENST00000477176 376 ntBASIC1.7□□□□□ -2.14
VPS50Q96JG6 RNU6-1212P-201ENST00000517023 104 ntBASIC1.7□□□□□ -2.14
VPS50Q96JG6 AC015688.6-201ENST00000577737 104 ntBASIC1.7□□□□□ -2.14
VPS50Q96JG6 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
VPS50Q96JG6 MIR3129-201ENST00000581095 76 ntBASIC1.7□□□□□ -2.14
VPS50Q96JG6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.7□□□□□ -2.14
VPS50Q96JG6 RNU6-199P-201ENST00000362954 107 ntBASIC1.69□□□□□ -2.14
VPS50Q96JG6 RNU6-774P-201ENST00000363238 107 ntBASIC1.69□□□□□ -2.14
VPS50Q96JG6 RNU6-1082P-201ENST00000364574 107 ntBASIC1.69□□□□□ -2.14
VPS50Q96JG6 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
VPS50Q96JG6 SNORD24-201ENST00000383884 75 ntBASIC1.69□□□□□ -2.14
VPS50Q96JG6 SNORA26-201ENST00000391286 122 ntBASIC1.69□□□□□ -2.14
VPS50Q96JG6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.69□□□□□ -2.14
VPS50Q96JG6 AF228730.3-201ENST00000436691 102 ntBASIC1.69□□□□□ -2.14
VPS50Q96JG6 SNORD116-25-201ENST00000516517 92 ntBASIC1.69□□□□□ -2.14
VPS50Q96JG6 RNU6-126P-201ENST00000516685 103 ntBASIC1.69□□□□□ -2.14
VPS50Q96JG6 MIR3683-201ENST00000580847 82 ntBASIC1.69□□□□□ -2.14
VPS50Q96JG6 FAM106DP-201ENST00000586416 501 ntBASIC1.69□□□□□ -2.14
VPS50Q96JG6 RNU6-151P-201ENST00000364158 107 ntBASIC1.68□□□□□ -2.14
VPS50Q96JG6 Y_RNA.242-201ENST00000364473 110 ntBASIC1.68□□□□□ -2.14
VPS50Q96JG6 SNORD48-201ENST00000364953 64 ntBASIC1.68□□□□□ -2.14
VPS50Q96JG6 Y_RNA.393-201ENST00000383936 102 ntBASIC1.68□□□□□ -2.14
VPS50Q96JG6 SNORD38C-201ENST00000384381 69 ntBASIC1.68□□□□□ -2.14
VPS50Q96JG6 MIR452-201ENST00000385020 85 ntBASIC1.68□□□□□ -2.14
VPS50Q96JG6 Y_RNA.580-201ENST00000391004 95 ntBASIC1.68□□□□□ -2.14
VPS50Q96JG6 SNORA67.5-201ENST00000391036 107 ntBASIC1.68□□□□□ -2.14
VPS50Q96JG6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.68□□□□□ -2.14
VPS50Q96JG6 RNU6-346P-201ENST00000516288 111 ntBASIC1.68□□□□□ -2.14
VPS50Q96JG6 RNU6-970P-201ENST00000516312 107 ntBASIC1.68□□□□□ -2.14
VPS50Q96JG6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS50Q96JG6 MIR8063-201ENST00000621930 81 ntBASIC1.68□□□□□ -2.14
VPS50Q96JG6 RNA5SP99-201ENST00000364020 114 ntBASIC1.67□□□□□ -2.14
VPS50Q96JG6 RNU6-449P-201ENST00000383914 107 ntBASIC1.67□□□□□ -2.14
VPS50Q96JG6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
VPS50Q96JG6 RNU6-588P-201ENST00000410281 105 ntBASIC1.67□□□□□ -2.14
VPS50Q96JG6 RNU4-57P-201ENST00000515980 135 ntBASIC1.67□□□□□ -2.14
VPS50Q96JG6 RNU7-181P-201ENST00000517234 74 ntBASIC1.67□□□□□ -2.14
VPS50Q96JG6 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
VPS50Q96JG6 DNAJC19P2-201ENST00000593340 302 ntBASIC1.67□□□□□ -2.14
VPS50Q96JG6 MIR376A2-201ENST00000636782 80 ntBASIC1.67□□□□□ -2.14
VPS50Q96JG6 MIR302D-201ENST00000362275 68 ntBASIC1.66□□□□□ -2.14
VPS50Q96JG6 RNU4-11P-201ENST00000365287 132 ntBASIC1.66□□□□□ -2.14
VPS50Q96JG6 Y_RNA.506-201ENST00000384494 102 ntBASIC1.66□□□□□ -2.14
VPS50Q96JG6 MIR136-201ENST00000385207 82 ntBASIC1.66□□□□□ -2.14
VPS50Q96JG6 RNU6-938P-201ENST00000411285 103 ntBASIC1.66□□□□□ -2.14
VPS50Q96JG6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS50Q96JG6 HSPE1P24-201ENST00000450782 238 ntBASIC1.66□□□□□ -2.14
VPS50Q96JG6 snoU13.9-201ENST00000458927 103 ntBASIC1.66□□□□□ -2.14
VPS50Q96JG6 RNU7-200P-201ENST00000516105 62 ntBASIC1.66□□□□□ -2.14
VPS50Q96JG6 AL365434.2-201ENST00000607979 234 ntBASIC1.66□□□□□ -2.14
VPS50Q96JG6 Y_RNA.778-201ENST00000620203 90 ntBASIC1.66□□□□□ -2.14
VPS50Q96JG6 SNORD115-28-201ENST00000363931 81 ntBASIC1.65□□□□□ -2.15
VPS50Q96JG6 SNORD1A-201ENST00000364968 72 ntBASIC1.65□□□□□ -2.15
VPS50Q96JG6 RNA5SP190-201ENST00000365222 118 ntBASIC1.65□□□□□ -2.15
VPS50Q96JG6 RNU6-597P-201ENST00000365620 102 ntBASIC1.65□□□□□ -2.15
VPS50Q96JG6 Y_RNA.494-201ENST00000384432 111 ntBASIC1.65□□□□□ -2.15
VPS50Q96JG6 SNORD77.3-201ENST00000391113 65 ntBASIC1.65□□□□□ -2.15
VPS50Q96JG6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS50Q96JG6 SUMO1P3-201ENST00000439961 304 ntBASIC1.65□□□□□ -2.15
VPS50Q96JG6 RNU6-830P-201ENST00000516353 107 ntBASIC1.65□□□□□ -2.15
VPS50Q96JG6 SNORD36C-201ENST00000516733 66 ntBASIC1.65□□□□□ -2.15
VPS50Q96JG6 SNORA18.7-201ENST00000516910 131 ntBASIC1.65□□□□□ -2.15
VPS50Q96JG6 RNU6-250P-201ENST00000516958 103 ntBASIC1.65□□□□□ -2.15
VPS50Q96JG6 MIR6844-201ENST00000637122 62 ntBASIC1.65□□□□□ -2.15
VPS50Q96JG6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
VPS50Q96JG6 Y_RNA.37-201ENST00000362606 108 ntBASIC1.64□□□□□ -2.15
VPS50Q96JG6 RNU1-17P-201ENST00000363022 152 ntBASIC1.64□□□□□ -2.15
VPS50Q96JG6 RNU6-125P-201ENST00000384505 107 ntBASIC1.64□□□□□ -2.15
VPS50Q96JG6 MIR9-3-201ENST00000385084 90 ntBASIC1.64□□□□□ -2.15
VPS50Q96JG6 MIR653-201ENST00000385279 96 ntBASIC1.64□□□□□ -2.15
VPS50Q96JG6 SNORD37.2-201ENST00000391075 66 ntBASIC1.64□□□□□ -2.15
VPS50Q96JG6 AC003989.2-201ENST00000440224 169 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 219.7 ms