Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.68□□□□□ -2.14
HOXC13P31276 MIR367-201ENST00000362299 68 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 Y_RNA.796-201ENST00000364268 102 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 SNORA63D-201ENST00000364359 132 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 Y_RNA.799-201ENST00000364992 102 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 RNU6-1240P-201ENST00000365155 104 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 SNORA22-201ENST00000383907 134 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 MIR548B-201ENST00000385247 97 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 MIR526A2-201ENST00000390198 65 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.67□□□□□ -2.14
HOXC13P31276 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.67□□□□□ -2.14
HOXC13P31276 RPS27P1-201ENST00000450552 247 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 AC005908.1-201ENST00000468701 347 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 CYCTP-201ENST00000504253 315 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 RNU6-902P-201ENST00000517212 91 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 MTND5P34-201ENST00000568888 325 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 AL391903.3-201ENST00000612158 163 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 AC068647.2-201ENST00000637380 353 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 ICE2P2-201ENST00000483823 2787 ntBASIC1.67□□□□□ -2.14
HOXC13P31276 MTND5P32-201ENST00000560711 1802 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 RNU6-834P-201ENST00000362367 110 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 Y_RNA.124-201ENST00000363339 93 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 U3.8-201ENST00000363675 217 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 RNU6-1082P-201ENST00000364574 107 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 RNU6-60P-201ENST00000364792 103 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 RNU6-915P-201ENST00000364943 103 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 RNU6-728P-201ENST00000365375 104 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 RNU6-1144P-201ENST00000384247 104 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 RNU6-476P-201ENST00000384726 107 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 RNU6-1228P-201ENST00000391014 107 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 RN7SKP101-201ENST00000411376 320 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 TOMM22P2-201ENST00000430735 237 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.66□□□□□ -2.14
HOXC13P31276 RNU6-221P-201ENST00000459541 99 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 RNA5SP437-201ENST00000517249 129 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 AC025647.1-201ENST00000517879 253 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 SNORA4-201ENST00000584302 138 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 U7.2-201ENST00000607576 63 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 AL512598.1-201ENST00000610158 273 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 AP001340.1-201ENST00000624405 217 ntBASIC1.66□□□□□ -2.14
HOXC13P31276 RNU6-1255P-201ENST00000363434 112 ntBASIC1.65□□□□□ -2.15
HOXC13P31276 RNU4-13P-201ENST00000364019 141 ntBASIC1.65□□□□□ -2.15
HOXC13P31276 Y_RNA.251-201ENST00000364551 99 ntBASIC1.65□□□□□ -2.15
HOXC13P31276 Y_RNA.393-201ENST00000383936 102 ntBASIC1.65□□□□□ -2.15
HOXC13P31276 Y_RNA.563-201ENST00000384707 108 ntBASIC1.65□□□□□ -2.15
HOXC13P31276 RNA5SP323-201ENST00000391094 133 ntBASIC1.65□□□□□ -2.15
HOXC13P31276 SNORA36B-201ENST00000410438 131 ntBASIC1.65□□□□□ -2.15
HOXC13P31276 RNA5SP170-201ENST00000517150 101 ntBASIC1.65□□□□□ -2.15
HOXC13P31276 AC090049.2-201ENST00000550377 109 ntBASIC1.65□□□□□ -2.15
HOXC13P31276 AC127455.1-201ENST00000565496 145 ntBASIC1.65□□□□□ -2.15
HOXC13P31276 MIR3646-201ENST00000578301 84 ntBASIC1.65□□□□□ -2.15
HOXC13P31276 AC108081.1-201ENST00000604358 221 ntBASIC1.65□□□□□ -2.15
HOXC13P31276 MIR4679-1-201ENST00000637619 75 ntBASIC1.65□□□□□ -2.15
HOXC13P31276 Y_RNA.43-201ENST00000362670 111 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 SNORD45.3-201ENST00000363836 72 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 RNU6-144P-201ENST00000383951 107 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 Y_RNA.584-201ENST00000391090 114 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 Y_RNA.587-201ENST00000391210 103 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 SNORA75.5-201ENST00000391291 81 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 HSPE1P13-201ENST00000451143 297 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 SNRPGP8-201ENST00000454064 226 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 RPS26P55-201ENST00000471178 356 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 AC079140.2-201ENST00000506193 142 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 RNU5E-3P-201ENST00000515913 68 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 RN7SKP179-201ENST00000516126 217 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 Y_RNA.709-201ENST00000516952 92 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 AC090142.3-201ENST00000519012 385 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 AC027419.1-201ENST00000522976 328 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 AC024995.1-201ENST00000523014 93 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 SNORA77B-201ENST00000578179 125 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 MIR4679-2-201ENST00000578358 77 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 MIR3613-201ENST00000579844 87 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 AC120024.3-201ENST00000603167 156 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 MIR548AY-201ENST00000617669 107 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 MIR8063-201ENST00000621930 81 ntBASIC1.64□□□□□ -2.15
HOXC13P31276 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HOXC13P31276 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HOXC13P31276 SNORA25.7-201ENST00000364375 127 ntBASIC1.63□□□□□ -2.15
HOXC13P31276 RNU6-53P-201ENST00000365367 106 ntBASIC1.63□□□□□ -2.15
HOXC13P31276 Y_RNA.361-201ENST00000365515 120 ntBASIC1.63□□□□□ -2.15
HOXC13P31276 SNORD116-13-201ENST00000384408 92 ntBASIC1.63□□□□□ -2.15
HOXC13P31276 MIR518E-201ENST00000385252 88 ntBASIC1.63□□□□□ -2.15
HOXC13P31276 MIR1185-2-201ENST00000408687 86 ntBASIC1.63□□□□□ -2.15
HOXC13P31276 SNORA70.12-201ENST00000516084 153 ntBASIC1.63□□□□□ -2.15
HOXC13P31276 RNU7-115P-201ENST00000516433 55 ntBASIC1.63□□□□□ -2.15
HOXC13P31276 RNU6-1337P-201ENST00000516525 95 ntBASIC1.63□□□□□ -2.15
HOXC13P31276 RNU1-142P-201ENST00000516682 145 ntBASIC1.63□□□□□ -2.15
HOXC13P31276 SNORD53B-201ENST00000577887 78 ntBASIC1.63□□□□□ -2.15
HOXC13P31276 U8.1-201ENST00000362843 134 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 RNU6-271P-201ENST00000363858 105 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 RNU6-1065P-201ENST00000384513 106 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 SNORA40.5-201ENST00000391061 128 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 RNA5SP467-201ENST00000391274 118 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 AL355796.1-201ENST00000406706 323 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 MIR1278-201ENST00000408753 81 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 Y_RNA.630-201ENST00000411370 108 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 snoU13.27-201ENST00000459278 104 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 RNU6-772P-201ENST00000516042 105 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 RNU6-1061P-201ENST00000516530 99 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 RNU6-63P-201ENST00000516690 95 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms