Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 MIR520G-201ENST00000385064 90 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 RNA5SP496-201ENST00000391240 109 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 RNU4-43P-201ENST00000410628 137 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 AP1B1P2-201ENST00000416196 106 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 RPS27P1-201ENST00000450552 247 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 HSPE1P24-201ENST00000450782 238 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 AL163195.1-201ENST00000496941 348 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 RNU6-970P-201ENST00000516312 107 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 RNU6-1007P-201ENST00000516586 107 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 RNU6-341P-201ENST00000516973 96 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 AC024995.1-201ENST00000523014 93 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 MIR6079-201ENST00000635807 62 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 AC018630.2-201ENST00000534866 2403 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 RNY1P10-201ENST00000363268 113 ntBASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 RNU6-1209P-201ENST00000363655 107 ntBASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 RNU6-484P-201ENST00000384016 107 ntBASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 MIR562-201ENST00000384894 95 ntBASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 RNU1-78P-201ENST00000391248 165 ntBASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 RNU6-321P-201ENST00000410912 106 ntBASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 SNRPGP8-201ENST00000454064 226 ntBASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 RNU1-98P-201ENST00000458992 160 ntBASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 RNU6-346P-201ENST00000516288 111 ntBASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 RNU6-406P-201ENST00000516470 107 ntBASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 SNORA31.24-201ENST00000517232 57 ntBASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 AC022217.4-201ENST00000604389 163 ntBASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
DDX43Q9NXZ2 ICE2P2-201ENST00000483823 2787 ntBASIC1.6□□□□□ -2.15
DDX43Q9NXZ2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
DDX43Q9NXZ2 RNU4-41P-201ENST00000364426 143 ntBASIC1.6□□□□□ -2.15
DDX43Q9NXZ2 RNU6-1080P-201ENST00000383982 107 ntBASIC1.6□□□□□ -2.15
DDX43Q9NXZ2 RNU6-239P-201ENST00000390990 99 ntBASIC1.6□□□□□ -2.15
DDX43Q9NXZ2 MIR1304-201ENST00000408243 91 ntBASIC1.6□□□□□ -2.15
DDX43Q9NXZ2 RNU4-61P-201ENST00000411243 107 ntBASIC1.6□□□□□ -2.15
DDX43Q9NXZ2 snoU13.27-201ENST00000459278 104 ntBASIC1.6□□□□□ -2.15
DDX43Q9NXZ2 NDUFA4P2-201ENST00000489989 244 ntBASIC1.6□□□□□ -2.15
DDX43Q9NXZ2 RNU6-1291P-201ENST00000516591 104 ntBASIC1.6□□□□□ -2.15
DDX43Q9NXZ2 RNU1-142P-201ENST00000516682 145 ntBASIC1.6□□□□□ -2.15
DDX43Q9NXZ2 AL512598.1-201ENST00000610158 273 ntBASIC1.6□□□□□ -2.15
DDX43Q9NXZ2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
DDX43Q9NXZ2 Y_RNA.8-201ENST00000362353 102 ntBASIC1.59□□□□□ -2.15
DDX43Q9NXZ2 SNORD45.3-201ENST00000363836 72 ntBASIC1.59□□□□□ -2.15
DDX43Q9NXZ2 Y_RNA.253-201ENST00000364562 112 ntBASIC1.59□□□□□ -2.15
DDX43Q9NXZ2 MIR15B-201ENST00000385045 98 ntBASIC1.59□□□□□ -2.15
DDX43Q9NXZ2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.59□□□□□ -2.15
DDX43Q9NXZ2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
DDX43Q9NXZ2 RNA5SP445-201ENST00000515889 115 ntBASIC1.59□□□□□ -2.15
DDX43Q9NXZ2 SNORD77.4-201ENST00000516158 81 ntBASIC1.59□□□□□ -2.15
DDX43Q9NXZ2 AL358944.1-201ENST00000528537 144 ntBASIC1.59□□□□□ -2.15
DDX43Q9NXZ2 AL359821.1-201ENST00000605519 182 ntBASIC1.59□□□□□ -2.15
DDX43Q9NXZ2 MIR8063-201ENST00000621930 81 ntBASIC1.59□□□□□ -2.15
DDX43Q9NXZ2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
DDX43Q9NXZ2 MIR302D-201ENST00000362275 68 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 SNORA1B-201ENST00000362535 133 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 SNORD116-18-201ENST00000383961 92 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 RNU6-643P-201ENST00000384018 107 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 SNORA12.1-201ENST00000390873 148 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 RNA5SP323-201ENST00000391094 133 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 Y_RNA.587-201ENST00000391210 103 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 MIR1287-201ENST00000408492 90 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 AL354695.1-201ENST00000427935 228 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 AC245517.4-201ENST00000448601 281 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 RNU7-95P-201ENST00000459222 64 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 DNAJC19P9-201ENST00000555084 351 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 RPL23AP91-201ENST00000569211 455 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 AL049861.1-201ENST00000603130 150 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 AP001485.1-201ENST00000604799 199 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 uc_338.4-201ENST00000616635 176 ntBASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
DDX43Q9NXZ2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 RNU6-728P-201ENST00000365375 104 ntBASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 Y_RNA.622-201ENST00000411091 108 ntBASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 AL161935.2-201ENST00000414627 60 ntBASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 AL121914.1-201ENST00000450188 156 ntBASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 AC023790.1-201ENST00000482174 347 ntBASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 TRMT112P2-201ENST00000512910 132 ntBASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 AL160236.1-201ENST00000556317 195 ntBASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 MIR4709-201ENST00000577272 72 ntBASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 MIR3910-1-201ENST00000580936 111 ntBASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 MIR2681-201ENST00000581814 105 ntBASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 AC097639.2-201ENST00000603159 172 ntBASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 AC095038.3-201ENST00000634439 195 ntBASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 MIR3658-201ENST00000636291 56 ntBASIC1.57□□□□□ -2.16
DDX43Q9NXZ2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.56□□□□□ -2.16
DDX43Q9NXZ2 RNU6-978P-201ENST00000364371 103 ntBASIC1.56□□□□□ -2.16
DDX43Q9NXZ2 RNU6-1138P-201ENST00000365359 106 ntBASIC1.56□□□□□ -2.16
DDX43Q9NXZ2 SNORD50.2-201ENST00000365465 70 ntBASIC1.56□□□□□ -2.16
DDX43Q9NXZ2 Y_RNA.357-201ENST00000365487 109 ntBASIC1.56□□□□□ -2.16
DDX43Q9NXZ2 RNU6-449P-201ENST00000383914 107 ntBASIC1.56□□□□□ -2.16
DDX43Q9NXZ2 RNA5SP109-201ENST00000391010 116 ntBASIC1.56□□□□□ -2.16
DDX43Q9NXZ2 RNU2-55P-201ENST00000411146 174 ntBASIC1.56□□□□□ -2.16
DDX43Q9NXZ2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.56□□□□□ -2.16
DDX43Q9NXZ2 HMGN1P7-201ENST00000491722 313 ntBASIC1.56□□□□□ -2.16
DDX43Q9NXZ2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.56□□□□□ -2.16
DDX43Q9NXZ2 SNORA31.10-201ENST00000516482 106 ntBASIC1.56□□□□□ -2.16
DDX43Q9NXZ2 SNORD116-25-201ENST00000516517 92 ntBASIC1.56□□□□□ -2.16
DDX43Q9NXZ2 AL591926.4-201ENST00000616895 298 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms