Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIR934-201ENST00000401241 83 ntBASIC1.79□□□□□ -2.12
VPS50Q96JG6 RNU4-43P-201ENST00000410628 137 ntBASIC1.79□□□□□ -2.12
VPS50Q96JG6 AL161935.2-201ENST00000414627 60 ntBASIC1.79□□□□□ -2.12
VPS50Q96JG6 SNRPGP14-201ENST00000435400 219 ntBASIC1.79□□□□□ -2.12
VPS50Q96JG6 CYCTP-201ENST00000504253 315 ntBASIC1.79□□□□□ -2.12
VPS50Q96JG6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.79□□□□□ -2.12
VPS50Q96JG6 AL513423.1-201ENST00000621695 132 ntBASIC1.79□□□□□ -2.12
VPS50Q96JG6 SNORD3E-202ENST00000627253 216 ntBASIC1.79□□□□□ -2.12
VPS50Q96JG6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
VPS50Q96JG6 MIR424-201ENST00000362227 98 ntBASIC1.78□□□□□ -2.12
VPS50Q96JG6 SNORD14E-201ENST00000364009 85 ntBASIC1.78□□□□□ -2.12
VPS50Q96JG6 RNU6-643P-201ENST00000384018 107 ntBASIC1.78□□□□□ -2.12
VPS50Q96JG6 Y_RNA.441-201ENST00000384123 112 ntBASIC1.78□□□□□ -2.12
VPS50Q96JG6 MIR660-201ENST00000385235 97 ntBASIC1.78□□□□□ -2.12
VPS50Q96JG6 RNU2-70P-201ENST00000410718 179 ntBASIC1.78□□□□□ -2.12
VPS50Q96JG6 RNU2-55P-201ENST00000411146 174 ntBASIC1.78□□□□□ -2.12
VPS50Q96JG6 RNU6-197P-201ENST00000516680 100 ntBASIC1.78□□□□□ -2.12
VPS50Q96JG6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.78□□□□□ -2.12
VPS50Q96JG6 SUMO2P16-201ENST00000519475 264 ntBASIC1.78□□□□□ -2.12
VPS50Q96JG6 AC087685.1-201ENST00000587507 141 ntBASIC1.78□□□□□ -2.12
VPS50Q96JG6 AC021753.1-201ENST00000635724 168 ntBASIC1.78□□□□□ -2.12
VPS50Q96JG6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VPS50Q96JG6 Y_RNA.8-201ENST00000362353 102 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 RNU6-414P-201ENST00000363705 104 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 RNU6-268P-201ENST00000364174 107 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 RNU4-84P-201ENST00000364200 139 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 RNU6-818P-201ENST00000364837 108 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 MIR30A-201ENST00000385092 71 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
VPS50Q96JG6 SNORA40.18-201ENST00000391200 128 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 RNU6-394P-201ENST00000410735 107 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 AC004965.1-201ENST00000413033 213 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 CYCSP49-201ENST00000420810 319 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 JTBP1-201ENST00000441314 247 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 SNORA77B-201ENST00000578179 125 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 MIR6845-201ENST00000613182 61 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 AC027279.3-201ENST00000625055 122 ntBASIC1.77□□□□□ -2.13
VPS50Q96JG6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
VPS50Q96JG6 RNU6-661P-201ENST00000362409 107 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 Y_RNA.66-201ENST00000362862 102 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 RNU6-833P-201ENST00000363486 107 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 RNU6-457P-201ENST00000363999 107 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 SNORA16.1-201ENST00000364597 132 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 Y_RNA.272-201ENST00000364696 102 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 RNU6-1130P-201ENST00000365434 107 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 RNU6-442P-201ENST00000383968 104 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 SNORD61-201ENST00000384252 73 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 MIR802-201ENST00000390235 94 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 MIR891A-201ENST00000401237 79 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 AC005908.1-201ENST00000468701 347 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 RNU6-255P-201ENST00000516957 105 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 MTND5P41-201ENST00000517498 206 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 AC106754.2-201ENST00000623006 233 ntBASIC1.76□□□□□ -2.13
VPS50Q96JG6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS50Q96JG6 Y_RNA.357-201ENST00000365487 109 ntBASIC1.75□□□□□ -2.13
VPS50Q96JG6 RNU6-1336P-201ENST00000383886 109 ntBASIC1.75□□□□□ -2.13
VPS50Q96JG6 MIR526A1-201ENST00000384897 85 ntBASIC1.75□□□□□ -2.13
VPS50Q96JG6 RPL30P13-201ENST00000418873 348 ntBASIC1.75□□□□□ -2.13
VPS50Q96JG6 HMGN2P23-201ENST00000456759 269 ntBASIC1.75□□□□□ -2.13
VPS50Q96JG6 SNORA25.15-201ENST00000516487 89 ntBASIC1.75□□□□□ -2.13
VPS50Q96JG6 RNA5SP153-201ENST00000516498 76 ntBASIC1.75□□□□□ -2.13
VPS50Q96JG6 RNU6-365P-201ENST00000517113 106 ntBASIC1.75□□□□□ -2.13
VPS50Q96JG6 RNU6-1270P-201ENST00000517128 108 ntBASIC1.75□□□□□ -2.13
VPS50Q96JG6 AC007751.1-201ENST00000529260 376 ntBASIC1.75□□□□□ -2.13
VPS50Q96JG6 MIR3144-201ENST00000579460 79 ntBASIC1.75□□□□□ -2.13
VPS50Q96JG6 MIR4662B-201ENST00000579498 81 ntBASIC1.75□□□□□ -2.13
VPS50Q96JG6 MIR3658-201ENST00000636291 56 ntBASIC1.75□□□□□ -2.13
VPS50Q96JG6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VPS50Q96JG6 Y_RNA.336-201ENST00000365307 109 ntBASIC1.74□□□□□ -2.13
VPS50Q96JG6 Y_RNA.398-201ENST00000383952 99 ntBASIC1.74□□□□□ -2.13
VPS50Q96JG6 MIR548A2-201ENST00000384956 97 ntBASIC1.74□□□□□ -2.13
VPS50Q96JG6 MIR516B2-201ENST00000385190 85 ntBASIC1.74□□□□□ -2.13
VPS50Q96JG6 RNU6-239P-201ENST00000390990 99 ntBASIC1.74□□□□□ -2.13
VPS50Q96JG6 SNORA79-201ENST00000408376 140 ntBASIC1.74□□□□□ -2.13
VPS50Q96JG6 MIR1267-201ENST00000408723 78 ntBASIC1.74□□□□□ -2.13
VPS50Q96JG6 AC090142.3-201ENST00000519012 385 ntBASIC1.74□□□□□ -2.13
VPS50Q96JG6 MIR4419B-201ENST00000577260 68 ntBASIC1.74□□□□□ -2.13
VPS50Q96JG6 MIR378D2-201ENST00000580636 98 ntBASIC1.74□□□□□ -2.13
VPS50Q96JG6 AC097639.2-201ENST00000603159 172 ntBASIC1.74□□□□□ -2.13
VPS50Q96JG6 AC006441.5-201ENST00000612680 209 ntBASIC1.74□□□□□ -2.13
VPS50Q96JG6 RNU6-978P-201ENST00000364371 103 ntBASIC1.73□□□□□ -2.13
VPS50Q96JG6 Y_RNA.464-201ENST00000384282 110 ntBASIC1.73□□□□□ -2.13
VPS50Q96JG6 RNU6-768P-201ENST00000384683 107 ntBASIC1.73□□□□□ -2.13
VPS50Q96JG6 AC015922.2-201ENST00000435593 184 ntBASIC1.73□□□□□ -2.13
VPS50Q96JG6 AC107027.2-201ENST00000512197 115 ntBASIC1.73□□□□□ -2.13
VPS50Q96JG6 RNU6-693P-201ENST00000516134 107 ntBASIC1.73□□□□□ -2.13
VPS50Q96JG6 RNA5SP458-201ENST00000516188 119 ntBASIC1.73□□□□□ -2.13
VPS50Q96JG6 RNU7-25P-201ENST00000516544 62 ntBASIC1.73□□□□□ -2.13
VPS50Q96JG6 AL160236.1-201ENST00000556317 195 ntBASIC1.73□□□□□ -2.13
VPS50Q96JG6 MIR502-201ENST00000606349 86 ntBASIC1.73□□□□□ -2.13
VPS50Q96JG6 MIR8074-201ENST00000615081 81 ntBASIC1.73□□□□□ -2.13
VPS50Q96JG6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.73□□□□□ -2.13
VPS50Q96JG6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS50Q96JG6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS50Q96JG6 AL442644.1-201ENST00000454390 3105 ntBASIC1.72□□□□□ -2.13
VPS50Q96JG6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.72□□□□□ -2.13
VPS50Q96JG6 Y_RNA.170-201ENST00000363746 110 ntBASIC1.72□□□□□ -2.13
VPS50Q96JG6 SNORA1-201ENST00000384107 130 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms