Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AL391903.3-201ENST00000612158 163 ntBASIC1.15□□□□□ -2.23
LDB1Q86U70 U2.14-201ENST00000615943 113 ntBASIC1.15□□□□□ -2.23
LDB1Q86U70 AC027335.2-201ENST00000624030 375 ntBASIC1.15□□□□□ -2.23
LDB1Q86U70 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LDB1Q86U70 Y_RNA.117-201ENST00000363294 101 ntBASIC1.14□□□□□ -2.23
LDB1Q86U70 Y_RNA.483-201ENST00000384380 101 ntBASIC1.14□□□□□ -2.23
LDB1Q86U70 RNU6-939P-201ENST00000384634 107 ntBASIC1.14□□□□□ -2.23
LDB1Q86U70 SNORA8.3-201ENST00000384679 139 ntBASIC1.14□□□□□ -2.23
LDB1Q86U70 MT-TW-201ENST00000387382 68 ntBASIC1.14□□□□□ -2.23
LDB1Q86U70 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.14□□□□□ -2.23
LDB1Q86U70 AC245047.8-201ENST00000456455 284 ntBASIC1.14□□□□□ -2.23
LDB1Q86U70 RNU7-149P-201ENST00000516739 59 ntBASIC1.14□□□□□ -2.23
LDB1Q86U70 AL049861.1-201ENST00000603130 150 ntBASIC1.14□□□□□ -2.23
LDB1Q86U70 AL360085.1-201ENST00000604713 532 ntBASIC1.14□□□□□ -2.23
LDB1Q86U70 Y_RNA.47-201ENST00000362697 108 ntBASIC1.13□□□□□ -2.23
LDB1Q86U70 RNY1P10-201ENST00000363268 113 ntBASIC1.13□□□□□ -2.23
LDB1Q86U70 Y_RNA.149-201ENST00000363558 117 ntBASIC1.13□□□□□ -2.23
LDB1Q86U70 RNU6-740P-201ENST00000364734 105 ntBASIC1.13□□□□□ -2.23
LDB1Q86U70 RNU6-392P-201ENST00000364926 101 ntBASIC1.13□□□□□ -2.23
LDB1Q86U70 RNU6-1138P-201ENST00000365359 106 ntBASIC1.13□□□□□ -2.23
LDB1Q86U70 SNORA80D-201ENST00000384488 135 ntBASIC1.13□□□□□ -2.23
LDB1Q86U70 SNORD12-201ENST00000391002 90 ntBASIC1.13□□□□□ -2.23
LDB1Q86U70 AL358176.2-201ENST00000425769 204 ntBASIC1.13□□□□□ -2.23
LDB1Q86U70 SNORD116-28-201ENST00000516123 91 ntBASIC1.13□□□□□ -2.23
LDB1Q86U70 RNU7-40P-201ENST00000516397 64 ntBASIC1.13□□□□□ -2.23
LDB1Q86U70 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
LDB1Q86U70 PRELID3BP2-201ENST00000605362 201 ntBASIC1.13□□□□□ -2.23
LDB1Q86U70 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.13□□□□□ -2.23
LDB1Q86U70 Y_RNA.82-201ENST00000363000 102 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 Y_RNA.92-201ENST00000363043 102 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 Y_RNA.235-201ENST00000364412 102 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 Y_RNA.306-201ENST00000365015 102 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 Y_RNA.312-201ENST00000365089 102 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 Y_RNA.322-201ENST00000365151 102 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 RNU6-472P-201ENST00000384299 107 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 Y_RNA.518-201ENST00000384552 113 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 RNU6-1067P-201ENST00000384752 107 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 snoU13.25-201ENST00000458945 104 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 Y_RNA.650-201ENST00000459002 102 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 MTCO2P24-201ENST00000515611 426 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 RNU7-41P-201ENST00000515917 61 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 SNORD79.1-201ENST00000516069 84 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 RN7SKP164-201ENST00000516138 266 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 RNU6-327P-201ENST00000516270 127 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 Y_RNA.777-201ENST00000516982 102 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 Y_RNA.771-201ENST00000598668 102 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 Y_RNA.789-201ENST00000622480 102 ntBASIC1.12□□□□□ -2.23
LDB1Q86U70 MIR337-201ENST00000362281 93 ntBASIC1.11□□□□□ -2.23
LDB1Q86U70 Y_RNA.164-201ENST00000363709 102 ntBASIC1.11□□□□□ -2.23
LDB1Q86U70 RNA5SP48-201ENST00000363969 126 ntBASIC1.11□□□□□ -2.23
LDB1Q86U70 RNU4-10P-201ENST00000364383 140 ntBASIC1.11□□□□□ -2.23
LDB1Q86U70 Y_RNA.363-201ENST00000365529 113 ntBASIC1.11□□□□□ -2.23
LDB1Q86U70 U8.17-201ENST00000391292 132 ntBASIC1.11□□□□□ -2.23
LDB1Q86U70 AL078595.1-201ENST00000404458 226 ntBASIC1.11□□□□□ -2.23
LDB1Q86U70 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
LDB1Q86U70 SNORD2.1-201ENST00000458762 69 ntBASIC1.11□□□□□ -2.23
LDB1Q86U70 MIR4662B-201ENST00000579498 81 ntBASIC1.11□□□□□ -2.23
LDB1Q86U70 MIR548AR-201ENST00000582191 57 ntBASIC1.11□□□□□ -2.23
LDB1Q86U70 AC015726.2-201ENST00000620112 122 ntBASIC1.11□□□□□ -2.23
LDB1Q86U70 AC091895.1-201ENST00000624494 256 ntBASIC1.11□□□□□ -2.23
LDB1Q86U70 Y_RNA.24-201ENST00000362508 103 ntBASIC1.1□□□□□ -2.23
LDB1Q86U70 RNA5SP264-201ENST00000363115 107 ntBASIC1.1□□□□□ -2.23
LDB1Q86U70 RNU1-124P-201ENST00000363861 145 ntBASIC1.1□□□□□ -2.23
LDB1Q86U70 RNU6-53P-201ENST00000365367 106 ntBASIC1.1□□□□□ -2.23
LDB1Q86U70 SNORA70.7-201ENST00000384159 133 ntBASIC1.1□□□□□ -2.23
LDB1Q86U70 MIR626-201ENST00000385032 94 ntBASIC1.1□□□□□ -2.23
LDB1Q86U70 Y_RNA.590-201ENST00000410140 107 ntBASIC1.1□□□□□ -2.23
LDB1Q86U70 COX6CP14-201ENST00000469580 174 ntBASIC1.1□□□□□ -2.23
LDB1Q86U70 SNORD77.4-201ENST00000516158 81 ntBASIC1.1□□□□□ -2.23
LDB1Q86U70 RNU6-126P-201ENST00000516685 103 ntBASIC1.1□□□□□ -2.23
LDB1Q86U70 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.1□□□□□ -2.23
LDB1Q86U70 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.1□□□□□ -2.23
LDB1Q86U70 Y_RNA.4-201ENST00000362333 112 ntBASIC1.09□□□□□ -2.23
LDB1Q86U70 RNU6-1309P-201ENST00000363305 108 ntBASIC1.09□□□□□ -2.23
LDB1Q86U70 SNORA1.2-201ENST00000365189 134 ntBASIC1.09□□□□□ -2.23
LDB1Q86U70 Y_RNA.396-201ENST00000383949 103 ntBASIC1.09□□□□□ -2.23
LDB1Q86U70 SNORD28B-201ENST00000390993 75 ntBASIC1.09□□□□□ -2.23
LDB1Q86U70 Y_RNA.587-201ENST00000391210 103 ntBASIC1.09□□□□□ -2.23
LDB1Q86U70 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
LDB1Q86U70 AC063976.4-201ENST00000421971 163 ntBASIC1.09□□□□□ -2.23
LDB1Q86U70 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.09□□□□□ -2.23
LDB1Q86U70 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.09□□□□□ -2.23
LDB1Q86U70 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.09□□□□□ -2.23
LDB1Q86U70 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.09□□□□□ -2.23
LDB1Q86U70 SCARNA15.1-201ENST00000516384 125 ntBASIC1.09□□□□□ -2.23
LDB1Q86U70 Y_RNA.679-201ENST00000516416 91 ntBASIC1.09□□□□□ -2.23
LDB1Q86U70 MIR4781-201ENST00000585250 76 ntBASIC1.09□□□□□ -2.23
LDB1Q86U70 AC008133.2-201ENST00000624540 351 ntBASIC1.09□□□□□ -2.23
LDB1Q86U70 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LDB1Q86U70 Y_RNA.162-201ENST00000363683 102 ntBASIC1.08□□□□□ -2.24
LDB1Q86U70 Y_RNA.352-201ENST00000365439 102 ntBASIC1.08□□□□□ -2.24
LDB1Q86U70 MIR19B1-201ENST00000384829 87 ntBASIC1.08□□□□□ -2.24
LDB1Q86U70 RNU6-651P-201ENST00000411040 105 ntBASIC1.08□□□□□ -2.24
LDB1Q86U70 MTND2P23-201ENST00000422990 651 ntBASIC1.08□□□□□ -2.24
LDB1Q86U70 AC002429.1-201ENST00000437672 148 ntBASIC1.08□□□□□ -2.24
LDB1Q86U70 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.08□□□□□ -2.24
LDB1Q86U70 RNU7-21P-201ENST00000459430 62 ntBASIC1.08□□□□□ -2.24
LDB1Q86U70 RPS23P4-201ENST00000487908 423 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 313 ms