Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC124312.5-201ENST00000604451 268 ntBASIC-1.63□□□□□ -2.67
CHKB-CPT1BH3BT56 Z84480.1-201ENST00000605131 311 ntBASIC-1.63□□□□□ -2.67
CHKB-CPT1BH3BT56 AC087683.2-201ENST00000611384 326 ntBASIC-1.63□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU4-92P-201ENST00000363783 136 ntBASIC-1.64□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU5E-5P-201ENST00000365379 116 ntBASIC-1.64□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-157P-201ENST00000383957 107 ntBASIC-1.64□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.64□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-456P-201ENST00000384493 107 ntBASIC-1.64□□□□□ -2.67
CHKB-CPT1BH3BT56 RNA5SP261-201ENST00000410536 106 ntBASIC-1.64□□□□□ -2.67
CHKB-CPT1BH3BT56 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.64□□□□□ -2.67
CHKB-CPT1BH3BT56 MTCO2P30-201ENST00000503662 364 ntBASIC-1.64□□□□□ -2.67
CHKB-CPT1BH3BT56 MIR3165-201ENST00000579874 75 ntBASIC-1.64□□□□□ -2.67
CHKB-CPT1BH3BT56 POLR3GP2-201ENST00000588366 668 ntBASIC-1.64□□□□□ -2.67
CHKB-CPT1BH3BT56 AL158050.2-201ENST00000605336 568 ntBASIC-1.64□□□□□ -2.67
CHKB-CPT1BH3BT56 AC027807.2-201ENST00000616099 408 ntBASIC-1.64□□□□□ -2.67
CHKB-CPT1BH3BT56 uc_338.10-201ENST00000621872 182 ntBASIC-1.64□□□□□ -2.67
CHKB-CPT1BH3BT56 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.65□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.65□□□□□ -2.67
CHKB-CPT1BH3BT56 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.65□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU4-55P-201ENST00000410731 137 ntBASIC-1.65□□□□□ -2.67
CHKB-CPT1BH3BT56 AC074085.1-201ENST00000413598 418 ntBASIC-1.65□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.65□□□□□ -2.67
CHKB-CPT1BH3BT56 MIR4473-201ENST00000583731 91 ntBASIC-1.65□□□□□ -2.67
CHKB-CPT1BH3BT56 RNU6-949P-201ENST00000384040 107 ntBASIC-1.66□□□□□ -2.68
CHKB-CPT1BH3BT56 RNY3P9-201ENST00000384727 106 ntBASIC-1.66□□□□□ -2.68
CHKB-CPT1BH3BT56 SNORA40.5-201ENST00000391061 128 ntBASIC-1.66□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU2-61P-201ENST00000411069 191 ntBASIC-1.66□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-625P-201ENST00000459412 107 ntBASIC-1.66□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-189P-201ENST00000516120 101 ntBASIC-1.66□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.66□□□□□ -2.68
CHKB-CPT1BH3BT56 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.66□□□□□ -2.68
CHKB-CPT1BH3BT56 AC103705.1-201ENST00000619013 241 ntBASIC-1.66□□□□□ -2.68
CHKB-CPT1BH3BT56 RNY4P3-201ENST00000365254 95 ntBASIC-1.67□□□□□ -2.68
CHKB-CPT1BH3BT56 MIR517B-201ENST00000385102 67 ntBASIC-1.67□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-192P-201ENST00000391253 100 ntBASIC-1.67□□□□□ -2.68
CHKB-CPT1BH3BT56 MIR548I3-201ENST00000408378 149 ntBASIC-1.67□□□□□ -2.68
CHKB-CPT1BH3BT56 MTND3P23-201ENST00000431980 347 ntBASIC-1.67□□□□□ -2.68
CHKB-CPT1BH3BT56 snoU13.11-201ENST00000459219 104 ntBASIC-1.67□□□□□ -2.68
CHKB-CPT1BH3BT56 AC022137.1-201ENST00000483735 151 ntBASIC-1.67□□□□□ -2.68
CHKB-CPT1BH3BT56 RPS29P24-201ENST00000486345 171 ntBASIC-1.67□□□□□ -2.68
CHKB-CPT1BH3BT56 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.67□□□□□ -2.68
CHKB-CPT1BH3BT56 DEFB131E-201ENST00000532329 154 ntBASIC-1.67□□□□□ -2.68
CHKB-CPT1BH3BT56 MIR5692C1-201ENST00000585309 91 ntBASIC-1.67□□□□□ -2.68
CHKB-CPT1BH3BT56 AL357078.3-201ENST00000607528 618 ntBASIC-1.67□□□□□ -2.68
CHKB-CPT1BH3BT56 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.67□□□□□ -2.68
CHKB-CPT1BH3BT56 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-431P-201ENST00000383874 107 ntBASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-214P-201ENST00000384130 107 ntBASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-35P-201ENST00000384530 107 ntBASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 AL031003.1-201ENST00000404229 172 ntBASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 USP9YP16-201ENST00000430287 407 ntBASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 CHEK2P4-201ENST00000450340 246 ntBASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 USP9YP23-201ENST00000455085 407 ntBASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU7-55P-201ENST00000459426 62 ntBASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 SNORD22.1-201ENST00000516331 125 ntBASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 RNA5SP33-201ENST00000516687 98 ntBASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 AC018714.1-201ENST00000605028 208 ntBASIC-1.68□□□□□ -2.68
CHKB-CPT1BH3BT56 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.69□□□□□ -2.68
CHKB-CPT1BH3BT56 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.69□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.69□□□□□ -2.68
CHKB-CPT1BH3BT56 SNORA27-201ENST00000384323 126 ntBASIC-1.69□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-517P-201ENST00000384362 110 ntBASIC-1.69□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-601P-201ENST00000384540 107 ntBASIC-1.69□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-1257P-201ENST00000384625 110 ntBASIC-1.69□□□□□ -2.68
CHKB-CPT1BH3BT56 SNORD64-201ENST00000386683 67 ntBASIC-1.69□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU7-175P-201ENST00000515915 61 ntBASIC-1.69□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-531P-201ENST00000516694 104 ntBASIC-1.69□□□□□ -2.68
CHKB-CPT1BH3BT56 MTND4P7-201ENST00000523876 130 ntBASIC-1.69□□□□□ -2.68
CHKB-CPT1BH3BT56 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.69□□□□□ -2.68
CHKB-CPT1BH3BT56 MIR5188-201ENST00000583467 113 ntBASIC-1.69□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-653P-201ENST00000363074 106 ntBASIC-1.7□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU4-58P-201ENST00000363192 141 ntBASIC-1.7□□□□□ -2.68
CHKB-CPT1BH3BT56 SNORD113-7-201ENST00000363762 77 ntBASIC-1.7□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU1-141P-201ENST00000364623 158 ntBASIC-1.7□□□□□ -2.68
CHKB-CPT1BH3BT56 SNORD24-201ENST00000383884 75 ntBASIC-1.7□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-30P-201ENST00000384561 107 ntBASIC-1.7□□□□□ -2.68
CHKB-CPT1BH3BT56 MIR548O-201ENST00000408583 114 ntBASIC-1.7□□□□□ -2.68
CHKB-CPT1BH3BT56 EIF1P2-201ENST00000428233 350 ntBASIC-1.7□□□□□ -2.68
CHKB-CPT1BH3BT56 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.7□□□□□ -2.68
CHKB-CPT1BH3BT56 RNY1P9-201ENST00000532431 109 ntBASIC-1.7□□□□□ -2.68
CHKB-CPT1BH3BT56 AP000676.1-201ENST00000533307 52 ntBASIC-1.7□□□□□ -2.68
CHKB-CPT1BH3BT56 AC073534.2-201ENST00000620377 381 ntBASIC-1.7□□□□□ -2.68
CHKB-CPT1BH3BT56 MIR382-201ENST00000637119 76 ntBASIC-1.7□□□□□ -2.68
CHKB-CPT1BH3BT56 AC006927.3-201ENST00000638789 384 ntBASIC-1.7□□□□□ -2.68
CHKB-CPT1BH3BT56 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.71□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-597P-201ENST00000365620 102 ntBASIC-1.71□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.71□□□□□ -2.68
CHKB-CPT1BH3BT56 SNORD77.3-201ENST00000391113 65 ntBASIC-1.71□□□□□ -2.68
CHKB-CPT1BH3BT56 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.71□□□□□ -2.68
CHKB-CPT1BH3BT56 CYCSP46-201ENST00000423569 204 ntBASIC-1.71□□□□□ -2.68
CHKB-CPT1BH3BT56 AL356010.1-201ENST00000456364 102 ntBASIC-1.71□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU6-706P-201ENST00000517229 104 ntBASIC-1.71□□□□□ -2.68
CHKB-CPT1BH3BT56 MIR4424-201ENST00000585257 86 ntBASIC-1.71□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU4-68P-201ENST00000364314 141 ntBASIC-1.72□□□□□ -2.68
CHKB-CPT1BH3BT56 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.72□□□□□ -2.68
CHKB-CPT1BH3BT56 RNU4-66P-201ENST00000365199 138 ntBASIC-1.72□□□□□ -2.68
CHKB-CPT1BH3BT56 SNORA26.6-201ENST00000391256 115 ntBASIC-1.72□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 361.4 ms