Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 MIRLET7A3-201ENST00000362116 74 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 SNORD64-201ENST00000386683 67 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 SNORA25.14-201ENST00000516481 132 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 SNORA31.14-201ENST00000516728 116 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 SNORA25.16-201ENST00000516741 121 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 RNU2-56P-201ENST00000516826 190 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.28□□□□□ -2.45
TTC28Q96AY4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.28□□□□□ -2.45
TTC28Q96AY4 MTND5P34-201ENST00000568888 325 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 MTATP6P25-201ENST00000574491 261 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 MIR4999-201ENST00000585029 91 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 AC011458.1-201ENST00000604034 617 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 Z84480.1-201ENST00000605131 311 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.28□□□□□ -2.45
TTC28Q96AY4 AC006441.5-201ENST00000612680 209 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 SEPT14P19-203ENST00000633205 211 ntBASIC-0.28□□□□□ -2.45
TTC28Q96AY4 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 RNU6-501P-201ENST00000364072 100 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 RNU6-704P-201ENST00000364162 103 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 RNU6-533P-201ENST00000384144 107 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 RNU6-784P-201ENST00000384330 106 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 SNORD38C-201ENST00000384381 69 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 MIR501-201ENST00000390204 84 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
TTC28Q96AY4 SNORA75.1-201ENST00000391130 148 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.29□□□□□ -2.46
TTC28Q96AY4 MTND1P26-201ENST00000440488 538 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.29□□□□□ -2.46
TTC28Q96AY4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.29□□□□□ -2.46
TTC28Q96AY4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.29□□□□□ -2.46
TTC28Q96AY4 RNA5SP54-201ENST00000516951 92 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 MTND4P33-201ENST00000556706 766 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 MIR4771-2-201ENST00000577758 74 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 MIR4771-1-201ENST00000582617 74 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 AC009159.2-201ENST00000617603 606 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 Y_RNA.15-201ENST00000362420 102 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 Y_RNA.59-201ENST00000362828 102 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 SNORA20B-201ENST00000384220 132 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 U8.17-201ENST00000391292 132 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 MIR190B-201ENST00000401119 79 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 MTND3P1-201ENST00000441336 220 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 RNU7-185P-201ENST00000459215 60 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 AC116353.2-201ENST00000505332 712 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 AC133485.4-201ENST00000561835 220 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 MIR4748-201ENST00000578076 82 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 PIGPP4-201ENST00000584447 307 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 SNORD11B-201ENST00000607707 90 ntBASIC-0.29□□□□□ -2.46
TTC28Q96AY4 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 MTATP6P14-201ENST00000455189 673 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 AC010598.1-201ENST00000510378 103 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 RNU1-117P-201ENST00000517041 158 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 AC005176.2-201ENST00000596933 147 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 AC104010.1-201ENST00000616889 150 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 AL158209.2-201ENST00000619266 216 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 RNA5SP117-201ENST00000365294 118 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 SNORA20.2-201ENST00000383922 131 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 RNU6-665P-201ENST00000384639 107 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 MIR1-2-201ENST00000384961 85 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 RNU6-550P-201ENST00000391057 101 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 RNU2-29P-201ENST00000410423 189 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.3□□□□□ -2.46
TTC28Q96AY4 AC016550.1-201ENST00000505348 785 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.3□□□□□ -2.46
TTC28Q96AY4 AGGF1P4-201ENST00000568249 801 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 MIR3684-201ENST00000579779 74 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 MIR4677-201ENST00000584153 80 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 SNORD92-201ENST00000585078 85 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 HULC.1-201ENST00000612720 240 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 SCARNA4-201ENST00000629045 128 ntBASIC-0.3□□□□□ -2.46
TTC28Q96AY4 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 RNU6-490P-201ENST00000362985 107 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 SNORD115-33-201ENST00000363723 82 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 RNU6-407P-201ENST00000365280 104 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 RNU6-901P-201ENST00000384593 106 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 SNORD28B-201ENST00000390993 75 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 AC133104.1-201ENST00000429100 218 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.31□□□□□ -2.46
TTC28Q96AY4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.31□□□□□ -2.46
TTC28Q96AY4 AC100767.1-201ENST00000528178 123 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 AL157687.1-201ENST00000554853 619 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 AC244669.1-204ENST00000621564 178 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.31□□□□□ -2.46
TTC28Q96AY4 AC106754.1-201ENST00000562632 1513 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 SNORD45.3-201ENST00000363836 72 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 RNU6-117P-201ENST00000365415 107 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 RNU6-108P-201ENST00000365558 107 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.31□□□□□ -2.46
TTC28Q96AY4 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 RNU6-1044P-201ENST00000384755 107 ntBASIC-0.31□□□□□ -2.46
TTC28Q96AY4 MIR563-201ENST00000385080 79 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms