Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC131280.1-202ENST00000624067 4211 ntBASIC2.01□□□□□ -2.09
KHDC1Q4VXA5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2□□□□□ -2.09
KHDC1Q4VXA5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
KHDC1Q4VXA5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
KHDC1Q4VXA5 RNU6-661P-201ENST00000362409 107 ntBASIC2□□□□□ -2.09
KHDC1Q4VXA5 RNU6-163P-201ENST00000384396 106 ntBASIC2□□□□□ -2.09
KHDC1Q4VXA5 Y_RNA.486-201ENST00000384398 107 ntBASIC2□□□□□ -2.09
KHDC1Q4VXA5 SNORD72-201ENST00000390994 80 ntBASIC2□□□□□ -2.09
KHDC1Q4VXA5 RNA5SP489-201ENST00000410986 109 ntBASIC2□□□□□ -2.09
KHDC1Q4VXA5 RNU6-1135P-201ENST00000411083 103 ntBASIC2□□□□□ -2.09
KHDC1Q4VXA5 PGBD4P5-201ENST00000445958 426 ntBASIC2□□□□□ -2.09
KHDC1Q4VXA5 MIR5089-201ENST00000580047 84 ntBASIC2□□□□□ -2.09
KHDC1Q4VXA5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2□□□□□ -2.09
KHDC1Q4VXA5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
KHDC1Q4VXA5 MIR424-201ENST00000362227 98 ntBASIC1.99□□□□□ -2.09
KHDC1Q4VXA5 RNU6-833P-201ENST00000363486 107 ntBASIC1.99□□□□□ -2.09
KHDC1Q4VXA5 SNORD14E-201ENST00000364009 85 ntBASIC1.99□□□□□ -2.09
KHDC1Q4VXA5 RNU4-84P-201ENST00000364200 139 ntBASIC1.99□□□□□ -2.09
KHDC1Q4VXA5 RNU6-442P-201ENST00000383968 104 ntBASIC1.99□□□□□ -2.09
KHDC1Q4VXA5 RNU6-643P-201ENST00000384018 107 ntBASIC1.99□□□□□ -2.09
KHDC1Q4VXA5 RNU5E-9P-201ENST00000411164 104 ntBASIC1.99□□□□□ -2.09
KHDC1Q4VXA5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KHDC1Q4VXA5 HMGN2P32-201ENST00000444648 269 ntBASIC1.99□□□□□ -2.09
KHDC1Q4VXA5 AC114811.1-201ENST00000507207 168 ntBASIC1.99□□□□□ -2.09
KHDC1Q4VXA5 RNU7-12P-201ENST00000516030 62 ntBASIC1.99□□□□□ -2.09
KHDC1Q4VXA5 MIR514B-201ENST00000516774 80 ntBASIC1.99□□□□□ -2.09
KHDC1Q4VXA5 RNU6-1116P-201ENST00000517269 99 ntBASIC1.99□□□□□ -2.09
KHDC1Q4VXA5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 Y_RNA.634-201ENST00000364811 113 ntBASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 MIR802-201ENST00000390235 94 ntBASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 RNU6-239P-201ENST00000390990 99 ntBASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 MIR891A-201ENST00000401237 79 ntBASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 RNU2-70P-201ENST00000410718 179 ntBASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 RNU6-394P-201ENST00000410735 107 ntBASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 RNU2-40P-201ENST00000410833 196 ntBASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 AL356379.1-201ENST00000414105 126 ntBASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 UBL5P3-201ENST00000475112 231 ntBASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 RNU6-365P-201ENST00000517113 106 ntBASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 AC097639.2-201ENST00000603159 172 ntBASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
KHDC1Q4VXA5 RNU6-1123P-201ENST00000362347 106 ntBASIC1.97□□□□□ -2.09
KHDC1Q4VXA5 SNORD114-1-201ENST00000362705 72 ntBASIC1.97□□□□□ -2.09
KHDC1Q4VXA5 RNU6-414P-201ENST00000363705 104 ntBASIC1.97□□□□□ -2.09
KHDC1Q4VXA5 MIR194-1-201ENST00000384892 85 ntBASIC1.97□□□□□ -2.09
KHDC1Q4VXA5 MIR660-201ENST00000385235 97 ntBASIC1.97□□□□□ -2.09
KHDC1Q4VXA5 JTBP1-201ENST00000441314 247 ntBASIC1.97□□□□□ -2.09
KHDC1Q4VXA5 AC107027.2-201ENST00000512197 115 ntBASIC1.97□□□□□ -2.09
KHDC1Q4VXA5 RNU6-1212P-201ENST00000517023 104 ntBASIC1.97□□□□□ -2.09
KHDC1Q4VXA5 AL627230.6-201ENST00000611129 280 ntBASIC1.97□□□□□ -2.09
KHDC1Q4VXA5 AC006441.5-201ENST00000612680 209 ntBASIC1.97□□□□□ -2.09
KHDC1Q4VXA5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
KHDC1Q4VXA5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KHDC1Q4VXA5 Y_RNA.272-201ENST00000364696 102 ntBASIC1.96□□□□□ -2.1
KHDC1Q4VXA5 RNU6-203P-201ENST00000384038 104 ntBASIC1.96□□□□□ -2.1
KHDC1Q4VXA5 AC006461.1-201ENST00000412637 326 ntBASIC1.96□□□□□ -2.1
KHDC1Q4VXA5 HMGN2P19-201ENST00000425149 265 ntBASIC1.96□□□□□ -2.1
KHDC1Q4VXA5 SNRPGP14-201ENST00000435400 219 ntBASIC1.96□□□□□ -2.1
KHDC1Q4VXA5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.96□□□□□ -2.1
KHDC1Q4VXA5 RPS27P21-201ENST00000486977 252 ntBASIC1.96□□□□□ -2.1
KHDC1Q4VXA5 RNU7-121P-201ENST00000516604 62 ntBASIC1.96□□□□□ -2.1
KHDC1Q4VXA5 MIR378D2-201ENST00000580636 98 ntBASIC1.96□□□□□ -2.1
KHDC1Q4VXA5 MIR3124-201ENST00000582636 67 ntBASIC1.96□□□□□ -2.1
KHDC1Q4VXA5 AC104984.5-201ENST00000586878 94 ntBASIC1.96□□□□□ -2.1
KHDC1Q4VXA5 MIR6715A-201ENST00000615929 79 ntBASIC1.96□□□□□ -2.1
KHDC1Q4VXA5 SNORD3E-202ENST00000627253 216 ntBASIC1.96□□□□□ -2.1
KHDC1Q4VXA5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KHDC1Q4VXA5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
KHDC1Q4VXA5 RNU6-268P-201ENST00000364174 107 ntBASIC1.95□□□□□ -2.1
KHDC1Q4VXA5 RNU6-1062P-201ENST00000383908 107 ntBASIC1.95□□□□□ -2.1
KHDC1Q4VXA5 Y_RNA.580-201ENST00000391004 95 ntBASIC1.95□□□□□ -2.1
KHDC1Q4VXA5 AC004965.1-201ENST00000413033 213 ntBASIC1.95□□□□□ -2.1
KHDC1Q4VXA5 snoU13.15-201ENST00000459407 104 ntBASIC1.95□□□□□ -2.1
KHDC1Q4VXA5 RNU6-504P-201ENST00000516568 104 ntBASIC1.95□□□□□ -2.1
KHDC1Q4VXA5 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
KHDC1Q4VXA5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.95□□□□□ -2.1
KHDC1Q4VXA5 Y_RNA.91-201ENST00000363042 107 ntBASIC1.94□□□□□ -2.1
KHDC1Q4VXA5 Y_RNA.337-201ENST00000365312 102 ntBASIC1.94□□□□□ -2.1
KHDC1Q4VXA5 AL161935.2-201ENST00000414627 60 ntBASIC1.94□□□□□ -2.1
KHDC1Q4VXA5 MIR3144-201ENST00000579460 79 ntBASIC1.94□□□□□ -2.1
KHDC1Q4VXA5 AC092881.1-201ENST00000638218 2733 ntBASIC1.94□□□□□ -2.1
KHDC1Q4VXA5 Y_RNA.66-201ENST00000362862 102 ntBASIC1.93□□□□□ -2.1
KHDC1Q4VXA5 SNORD24-201ENST00000383884 75 ntBASIC1.93□□□□□ -2.1
KHDC1Q4VXA5 RNU6-439P-201ENST00000384188 106 ntBASIC1.93□□□□□ -2.1
KHDC1Q4VXA5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
KHDC1Q4VXA5 MIR1289-2-201ENST00000408360 111 ntBASIC1.93□□□□□ -2.1
KHDC1Q4VXA5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.93□□□□□ -2.1
KHDC1Q4VXA5 SNORD116-25-201ENST00000516517 92 ntBASIC1.93□□□□□ -2.1
KHDC1Q4VXA5 AC103810.8-201ENST00000607347 118 ntBASIC1.93□□□□□ -2.1
KHDC1Q4VXA5 AC104465.1-201ENST00000611365 139 ntBASIC1.93□□□□□ -2.1
KHDC1Q4VXA5 MIR8074-201ENST00000615081 81 ntBASIC1.93□□□□□ -2.1
KHDC1Q4VXA5 AC095038.3-201ENST00000634439 195 ntBASIC1.93□□□□□ -2.1
KHDC1Q4VXA5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
KHDC1Q4VXA5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.92□□□□□ -2.1
KHDC1Q4VXA5 MIR1267-201ENST00000408723 78 ntBASIC1.92□□□□□ -2.1
KHDC1Q4VXA5 AC003989.2-201ENST00000440224 169 ntBASIC1.92□□□□□ -2.1
KHDC1Q4VXA5 SNRPGP13-201ENST00000442212 177 ntBASIC1.92□□□□□ -2.1
KHDC1Q4VXA5 AC093850.1-201ENST00000454121 251 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms